FFCP PHASE1:Hg19::chr8:145010972..145010996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:145010972..145010996,- | |||
|description=CAGE_peak_at_chr8:145010972..145010996,- | |description=CAGE_peak_at_chr8:145010972..145010996,- | ||
|id=chr8:145010972..145010996,- | |id=chr8:145010972..145010996,- | ||
|ontology_enrichment_celltype=CL:0002076!7.05e-27!43;CL:0000066!1.89e-26!254;CL:0002368!3.69e-23!13;CL:0000223!6.82e-20!59;CL:0002202!7.22e-13!9;CL:0002632!7.22e-13!9;CL:0002159!4.95e-11!13;CL:0002328!6.21e-11!3;CL:0002621!1.21e-10!3;CL:0000068!1.66e-10!3;CL:0000069!1.66e-10!3;CL:0000307!1.66e-10!3;CL:0000377!1.66e-10!3;CL:0000244!6.96e-08!4;CL:0000731!6.96e-08!4;CL:0002251!7.49e-08!21;CL:0000063!7.58e-08!578;CL:0002327!1.54e-07!4;CL:0000575!2.12e-07!2;CL:0000076!2.98e-07!62 | |ontology_enrichment_celltype=CL:0002076!7.05e-27!43;CL:0000066!1.89e-26!254;CL:0002368!3.69e-23!13;CL:0000223!6.82e-20!59;CL:0002202!7.22e-13!9;CL:0002632!7.22e-13!9;CL:0002159!4.95e-11!13;CL:0002328!6.21e-11!3;CL:0002621!1.21e-10!3;CL:0000068!1.66e-10!3;CL:0000069!1.66e-10!3;CL:0000307!1.66e-10!3;CL:0000377!1.66e-10!3;CL:0000244!6.96e-08!4;CL:0000731!6.96e-08!4;CL:0002251!7.49e-08!21;CL:0000063!7.58e-08!578;CL:0002327!1.54e-07!4;CL:0000575!2.12e-07!2;CL:0000076!2.98e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.01e-34;13!CL:0002202;1.90e-32;9!CL:0002632;1.90e-32;9!CL:0002328;2.34e-25;3!CL:0000307;7.92e-25;3!CL:0002621;7.92e-25;3!CL:0002076;3.53e-19;42!CL:0002166;2.71e-07;3!CL:0002231;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.49e-34,13;CL:0002202,2.23e-32,9;CL:0002632,2.23e-32,9;CL:0002076,5.72e-27,42;CL:0002328,2.34e-25,3;CL:0002621,3.82e-25,3;CL:0000068,1.01e-24,3;CL:0000069,1.01e-24,3;CL:0000307,1.01e-24,3;CL:0000377,1.01e-24,3;CL:0000223,1.94e-19,58;CL:0002231,2.47e-07,3;CL:0002166,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;7.92e-25;3!CL:0000223;3.12e-12;58 | |||
|ontology_enrichment_disease=DOID:1749!6.38e-07!14 | |ontology_enrichment_disease=DOID:1749!6.38e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.78e-12!169;UBERON:0000925!7.78e-12!169;UBERON:0006595!7.78e-12!169;UBERON:0004815!6.21e-11!3;UBERON:0002031!6.21e-11!3;UBERON:0001949!1.21e-10!3;UBERON:0001004!2.12e-09!72;UBERON:0005157!1.36e-08!51;UBERON:0002185!2.80e-08!4;UBERON:0007196!5.62e-08!14;UBERON:0001558!5.62e-08!14;UBERON:0005153!6.93e-08!37;UBERON:0005911!8.61e-08!82;UBERON:0001911!1.54e-07!4;UBERON:0005333!1.54e-07!4;UBERON:0008425!1.54e-07!4;UBERON:0005311!1.54e-07!4;UBERON:0001007!3.65e-07!155;UBERON:0001555!3.65e-07!155;UBERON:0007026!3.65e-07!155;UBERON:0000065!6.14e-07!53;UBERON:0000165!6.54e-07!28;UBERON:0000930!6.54e-07!28 | |ontology_enrichment_uberon=UBERON:0004119!7.78e-12!169;UBERON:0000925!7.78e-12!169;UBERON:0006595!7.78e-12!169;UBERON:0004815!6.21e-11!3;UBERON:0002031!6.21e-11!3;UBERON:0001949!1.21e-10!3;UBERON:0001004!2.12e-09!72;UBERON:0005157!1.36e-08!51;UBERON:0002185!2.80e-08!4;UBERON:0007196!5.62e-08!14;UBERON:0001558!5.62e-08!14;UBERON:0005153!6.93e-08!37;UBERON:0005911!8.61e-08!82;UBERON:0001911!1.54e-07!4;UBERON:0005333!1.54e-07!4;UBERON:0008425!1.54e-07!4;UBERON:0005311!1.54e-07!4;UBERON:0001007!3.65e-07!155;UBERON:0001555!3.65e-07!155;UBERON:0007026!3.65e-07!155;UBERON:0000065!6.14e-07!53;UBERON:0000165!6.54e-07!28;UBERON:0000930!6.54e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.34e-25;3!UBERON:0002031;2.34e-25;3!UBERON:0001949;7.92e-25;3!UBERON:0007196;1.14e-19;15!UBERON:0001558;1.14e-19;15!UBERON:0002185;1.21e-15;5!UBERON:0004807;1.54e-13;22!UBERON:0000485;1.87e-11;7!UBERON:0003126;3.14e-11;7!UBERON:0003929;3.14e-11;7!UBERON:0001005;3.14e-11;7!UBERON:0000065;5.77e-10;44!UBERON:0003350;6.06e-10;8!UBERON:0001828;6.06e-10;8!UBERON:0005178;3.18e-09;34!UBERON:0002224;3.18e-09;34!UBERON:0005181;4.90e-08;35!UBERON:0000072;9.63e-08;37!UBERON:0005911;3.09e-07;36!UBERON:0000486;6.35e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.34e-25,3;UBERON:0002031,2.34e-25,3;UBERON:0001949,3.82e-25,3;UBERON:0007196,1.26e-19,15;UBERON:0001558,1.26e-19,15;UBERON:0002185,1.21e-15,5;UBERON:0001004,1.22e-11,74;UBERON:0003126,3.48e-11,7;UBERON:0001005,3.48e-11,7;UBERON:0004807,8.85e-11,28;UBERON:0003350,4.62e-10,8;UBERON:0001828,4.62e-10,8;UBERON:0000485,4.09e-09,9;UBERON:0005178,7.39e-09,34;UBERON:0002224,7.39e-09,34;UBERON:0005181,1.30e-08,35;UBERON:0000065,2.02e-08,54;UBERON:0008947,5.91e-08,38;UBERON:0003258,5.91e-08,38 | |||
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| ||
|short_description=p@chr8:145010972..145010996,- | |short_description=p@chr8:145010972..145010996,- | ||
}} | }} |
Latest revision as of 16:00, 31 July 2015
Short description: | p@chr8:145010972..145010996, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:145010972..145010996, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.49e-34 | 13 |
epithelial cell of tracheobronchial tree | 2.23e-32 | 9 |
epithelial cell of lower respiratory tract | 2.23e-32 | 9 |
endo-epithelial cell | 5.72e-27 | 42 |
bronchial epithelial cell | 2.34e-25 | 3 |
gingival epithelial cell | 3.82e-25 | 3 |
duct epithelial cell | 1.01e-24 | 3 |
branched duct epithelial cell | 1.01e-24 | 3 |
tracheal epithelial cell | 1.01e-24 | 3 |
tracheoblast | 1.01e-24 | 3 |
endodermal cell | 1.94e-19 | 58 |
epithelial cell of prostate | 2.47e-07 | 3 |
epithelial cell of Malassez | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.34e-25 | 3 |
epithelium of bronchus | 2.34e-25 | 3 |
gingival epithelium | 3.82e-25 | 3 |
tracheobronchial tree | 1.26e-19 | 15 |
lower respiratory tract | 1.26e-19 | 15 |
bronchus | 1.21e-15 | 5 |
respiratory system | 1.22e-11 | 74 |
trachea | 3.48e-11 | 7 |
respiratory airway | 3.48e-11 | 7 |
respiratory system epithelium | 8.85e-11 | 28 |
epithelium of mucosa | 4.62e-10 | 8 |
gingiva | 4.62e-10 | 8 |
simple columnar epithelium | 4.09e-09 | 9 |
thoracic cavity element | 7.39e-09 | 34 |
thoracic cavity | 7.39e-09 | 34 |
thoracic segment organ | 1.30e-08 | 35 |
respiratory tract | 2.02e-08 | 54 |
respiratory primordium | 5.91e-08 | 38 |
endoderm of foregut | 5.91e-08 | 38 |