FFCP PHASE1:Hg19::chr8:145640654..145640675,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55630 | |EntrezGene=55630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17129 | |HGNC=17129 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_uc003zco.2_5end | |association_with_transcript=82bp_to_uc003zco.2_5end | ||
|cluster_id=chr8:145640654..145640675,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_6_at_SLC39A4_5end | |description=CAGE_peak_6_at_SLC39A4_5end | ||
|id=chr8:145640654..145640675,- | |id=chr8:145640654..145640675,- | ||
|ontology_enrichment_celltype=CL:0002598!4.08e-07!1 | |ontology_enrichment_celltype=CL:0002598!4.08e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-09!115;UBERON:0005409!1.49e-07!35;UBERON:0000160!1.75e-07!27;UBERON:0004921!2.24e-07!129;UBERON:0004185!2.24e-07!129;UBERON:0001301!3.41e-07!1;UBERON:0002022!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!1.18e-09!115;UBERON:0005409!1.49e-07!35;UBERON:0000160!1.75e-07!27;UBERON:0004921!2.24e-07!129;UBERON:0004185!2.24e-07!129;UBERON:0001301!3.41e-07!1;UBERON:0002022!7.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.59e-40;4!UBERON:0000160;3.61e-20;17!UBERON:0005409;6.84e-16;22!UBERON:0004921;2.57e-09;33!UBERON:0002114;1.08e-08;2!UBERON:0000922;1.31e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.49e-40,4;UBERON:0000160,3.52e-20,17;UBERON:0005409,4.06e-14,25;UBERON:0002114,1.04e-08,2 | |||
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|short_description=p6@SLC39A4 | |short_description=p6@SLC39A4 | ||
}} | }} |
Latest revision as of 01:52, 17 September 2015
Short description: | p6@SLC39A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC39A4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 82bp_to_uc003zco.2_5end |
EntrezGene: | SLC39A4 |
HGNC: | 17129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.49e-40 | 4 |
intestine | 3.52e-20 | 17 |
gastrointestinal system | 4.06e-14 | 25 |
duodenum | 1.04e-08 | 2 |