FFCP PHASE1:Hg19::chr13:51381929..51381951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_uc001vey.2_5end | |association_with_transcript=-39bp_to_uc001vey.2_5end | ||
|cluster_id=chr13:51381929..51381951,+ | |||
|description=CAGE_peak_2_at_uc001vey.2_5end | |description=CAGE_peak_2_at_uc001vey.2_5end | ||
|id=chr13:51381929..51381951,+ | |id=chr13:51381929..51381951,+ | ||
|ontology_enrichment_celltype=CL:0000990!1.48e-23!8;CL:0000451!2.93e-19!10;CL:0000453!2.97e-16!5;CL:0002032!1.23e-11!165;CL:0000837!1.23e-11!165;CL:0000037!4.83e-11!172;CL:0000566!4.83e-11!172;CL:0000988!2.84e-10!182;CL:0000819!1.36e-09!1;CL:0000738!3.04e-09!140;CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112 | |ontology_enrichment_celltype=CL:0000990!1.48e-23!8;CL:0000451!2.93e-19!10;CL:0000453!2.97e-16!5;CL:0002032!1.23e-11!165;CL:0000837!1.23e-11!165;CL:0000037!4.83e-11!172;CL:0000566!4.83e-11!172;CL:0000988!2.84e-10!182;CL:0000819!1.36e-09!1;CL:0000738!3.04e-09!140;CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.23e-33;5!CL:0000990;6.80e-19;8!CL:0000451;1.38e-15;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.23e-33,5;CL:0000990,6.80e-19,8;CL:0000451,1.38e-15,10;CL:0002032,1.81e-08,161;CL:0000837,1.81e-08,161;CL:0000037,4.35e-08,168;CL:0000738,5.29e-08,136;CL:0000763,8.30e-08,108;CL:0000049,8.30e-08,108;CL:0000988,1.21e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!6.84e-15!51;DOID:0060083!6.84e-15!51;DOID:1240!7.24e-13!39;DOID:12603!6.88e-10!1;DOID:0060073!1.36e-09!1;DOID:8675!1.36e-09!1;DOID:8692!2.43e-09!31 | |ontology_enrichment_disease=DOID:2531!6.84e-15!51;DOID:0060083!6.84e-15!51;DOID:1240!7.24e-13!39;DOID:12603!6.88e-10!1;DOID:0060073!1.36e-09!1;DOID:8675!1.36e-09!1;DOID:8692!2.43e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:12603;2.97e-19;1!DOID:1240;8.37e-14;39!DOID:8692;3.68e-09;31!DOID:2531;2.29e-07;51!DOID:0060083;2.29e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.25e-19,1;DOID:1240,1.58e-16,39;DOID:2531,1.29e-12,51;DOID:0060083,1.29e-12,51;DOID:8692,1.23e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.08e-09!4;UBERON:0005058!2.08e-09!4;UBERON:0009113!2.08e-09!4;UBERON:0003295!2.08e-09!4;UBERON:0005562!2.08e-09!4;UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1;UBERON:0001042!5.12e-08!10;UBERON:0009145!5.12e-08!10;UBERON:0006562!2.49e-07!11 | |ontology_enrichment_uberon=UBERON:0002370!2.08e-09!4;UBERON:0005058!2.08e-09!4;UBERON:0009113!2.08e-09!4;UBERON:0003295!2.08e-09!4;UBERON:0005562!2.08e-09!4;UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1;UBERON:0001042!5.12e-08!10;UBERON:0009145!5.12e-08!10;UBERON:0006562!2.49e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.21e-36;2!UBERON:0005058;3.21e-36;2!UBERON:0009113;3.21e-36;2!UBERON:0004177;3.74e-15;5!UBERON:0005057;3.74e-15;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.06e-18,4;UBERON:0005058,1.06e-18,4;UBERON:0009113,1.06e-18,4;UBERON:0003295,1.06e-18,4;UBERON:0005562,1.06e-18,4;UBERON:0003351,8.27e-13,6;UBERON:0004177,4.06e-11,7;UBERON:0005057,4.06e-11,7;UBERON:0000974,4.66e-08,10;UBERON:0003408,4.66e-08,10;UBERON:0001042,4.66e-08,10;UBERON:0009145,4.66e-08,10;UBERON:0006562,2.10e-07,11;UBERON:0009722,2.10e-07,11;UBERON:0007690,2.10e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27347302789153,0,29.0970139295014,0,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0,9.83170445787066,4.69719826574073,5.33917253478107,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3789932800937,18.9996721648109,23.7169821670974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35636710655613,2.85543685760946,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27347302789153,0,29.0970139295014,0,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0,9.83170445787066,4.69719826574073,5.33917253478107,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3789932800937,18.9996721648109,23.7169821670974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35636710655613,2.85543685760946,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p2@uc001vey.2 | |short_description=p2@uc001vey.2 | ||
}} | }} |
Latest revision as of 16:43, 24 July 2015
Short description: | p2@uc001vey.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001vey.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_uc001vey.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.23e-33 | 5 |
conventional dendritic cell | 6.80e-19 | 8 |
dendritic cell | 1.38e-15 | 10 |
hematopoietic oligopotent progenitor cell | 1.81e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-08 | 161 |
hematopoietic stem cell | 4.35e-08 | 168 |
leukocyte | 5.29e-08 | 136 |
myeloid cell | 8.30e-08 | 108 |
common myeloid progenitor | 8.30e-08 | 108 |
hematopoietic cell | 1.21e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.06e-18 | 4 |
hemolymphoid system gland | 1.06e-18 | 4 |
thymic region | 1.06e-18 | 4 |
pharyngeal gland | 1.06e-18 | 4 |
thymus primordium | 1.06e-18 | 4 |
pharyngeal epithelium | 8.27e-13 | 6 |
hemopoietic organ | 4.06e-11 | 7 |
immune organ | 4.06e-11 | 7 |
neck | 4.66e-08 | 10 |
gland of gut | 4.66e-08 | 10 |
chordate pharynx | 4.66e-08 | 10 |
pharyngeal region of foregut | 4.66e-08 | 10 |
pharynx | 2.10e-07 | 11 |
entire pharyngeal arch endoderm | 2.10e-07 | 11 |
early pharyngeal endoderm | 2.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.25e-19 | 1 |
leukemia | 1.58e-16 | 39 |
hematologic cancer | 1.29e-12 | 51 |
immune system cancer | 1.29e-12 | 51 |
myeloid leukemia | 1.23e-09 | 31 |