FFCP PHASE1:Hg19::chr9:12685478..12685491,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZ52 | |UniProt=C9JZ52 | ||
|association_with_transcript=39bp_to_ENST00000473763_5end | |association_with_transcript=39bp_to_ENST00000473763_5end | ||
|cluster_id=chr9:12685478..12685491,+ | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_23_at_TYRP1_5end | |description=CAGE_peak_23_at_TYRP1_5end | ||
|id=chr9:12685478..12685491,+ | |id=chr9:12685478..12685491,+ | ||
|ontology_enrichment_celltype=CL:0000077!9.64e-37!19;CL:0002195!9.32e-16!2;CL:0002571!9.32e-16!2;CL:0002097!1.00e-15!2;CL:0000213!1.86e-13!57;CL:0000215!1.86e-13!57;CL:0000076!3.25e-12!62;CL:0000174!8.67e-11!3;CL:0002568!3.28e-08!1;CL:0000222!7.89e-08!119 | |ontology_enrichment_celltype=CL:0000077!9.64e-37!19;CL:0002195!9.32e-16!2;CL:0002571!9.32e-16!2;CL:0002097!1.00e-15!2;CL:0000213!1.86e-13!57;CL:0000215!1.86e-13!57;CL:0000076!3.25e-12!62;CL:0000174!8.67e-11!3;CL:0002568!3.28e-08!1;CL:0000222!7.89e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.98e-29;19!CL:0002195;2.32e-12;2!CL:0002571;2.32e-12;2!CL:0002097;3.06e-12;2!CL:0000174;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.44e-29,19;CL:0002195,2.32e-12,2;CL:0002571,2.32e-12,2;CL:0002097,2.90e-12,2;CL:0000213,1.17e-09,58;CL:0000215,1.17e-09,58;CL:0000076,6.66e-09,63;CL:0000174,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3112!8.15e-09!1;DOID:3371!1.71e-08!1;DOID:4549!1.71e-08!1;DOID:5861!1.71e-08!1;DOID:6496!1.71e-08!1 | |ontology_enrichment_disease=DOID:3112!8.15e-09!1;DOID:3371!1.71e-08!1;DOID:4549!1.71e-08!1;DOID:5861!1.71e-08!1;DOID:6496!1.71e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3112;4.59e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.28e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002369!8.67e-11!3;UBERON:0001235!8.67e-11!3;UBERON:0006858!8.67e-11!3;UBERON:0002368!5.01e-07!35 | |ontology_enrichment_uberon=UBERON:0002369!8.67e-11!3;UBERON:0001235!8.67e-11!3;UBERON:0006858!8.67e-11!3;UBERON:0002368!5.01e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.35e-08;3!UBERON:0001235;1.35e-08;3!UBERON:0006858;1.35e-08;3!UBERON:0002368;3.23e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.30e-08,3;UBERON:0001235,1.30e-08,3;UBERON:0006858,1.30e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,2.85955987316295,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75910784384528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,0.857766365499703,1.30497145982606,0.906823702049089,1.15761237161917,9.29999477124577,0,0.617602894321944,5.48210123946768,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48562405187314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,2.85955987316295,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75910784384528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,0.857766365499703,1.30497145982606,0.906823702049089,1.15761237161917,9.29999477124577,0,0.617602894321944,5.48210123946768,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48562405187314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@TYRP1 | |short_description=p23@TYRP1 | ||
}} | }} |
Latest revision as of 23:23, 24 September 2015
Short description: | p23@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TYRP1_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | 39bp_to_ENST00000473763_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | C9JZ52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.44e-29 | 19 |
hepatic stem cell | 2.32e-12 | 2 |
hepatic mesenchymal stem cell | 2.32e-12 | 2 |
cortical cell of adrenal gland | 2.90e-12 | 2 |
lining cell | 1.17e-09 | 58 |
barrier cell | 1.17e-09 | 58 |
squamous epithelial cell | 6.66e-09 | 63 |
steroid hormone secreting cell | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.30e-08 | 3 |
adrenal cortex | 1.30e-08 | 3 |
adrenal/interrenal gland | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.28e-23 | 1 |