FFCP PHASE1:Hg19::chr17:1013333..1013374,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:1013333..1013374,-
|short_description=p@chr17:1013333..1013374,-
|description=CAGE_peak_at_chr17:1013333..1013374,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:1013333..1013374,- | |||
|description=CAGE_peak_at_chr17:1013333..1013374,- | |||
|id=chr17:1013333..1013374,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.24e-17;3!CL:0000067;1.24e-17;3!CL:0005012;1.24e-17;3!CL:0002304;1.24e-17;3!CL:0002549;9.92e-13;2!CL:0000708;1.46e-08;3!CL:0000342;9.23e-07;1!CL:0002565;9.23e-07;1!CL:0002581;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.16e-18,3;CL:0000067,8.16e-18,3;CL:0005012,8.16e-18,3;CL:0002304,8.16e-18,3;CL:0002549,8.86e-13,2;CL:0000708,1.02e-08,3;CL:0002581,7.57e-07,1;CL:0000342,8.98e-07,1;CL:0002565,8.98e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.36e-07;1!DOID:3371;4.01e-07;1!DOID:4549;4.01e-07;1!DOID:5861;4.01e-07;1!DOID:6496;4.01e-07;1!DOID:3347;4.01e-07;1!DOID:0050619;9.23e-07;1!DOID:1357;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.36e-07,1;DOID:3371,3.57e-07,1;DOID:4549,3.57e-07,1;DOID:5861,3.57e-07,1;DOID:6496,3.57e-07,1;DOID:3347,5.06e-07,1;DOID:0050619,6.02e-07,1;DOID:1357,6.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002200!1.88e-07!11;UBERON:0006876!1.88e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.55e-24;11!UBERON:0000488;1.13e-22;4!UBERON:0001778;1.24e-17;3!UBERON:0001775;1.24e-17;3!UBERON:0002203;3.49e-15;6!UBERON:0001768;3.49e-15;6!UBERON:0002200;3.49e-15;6!UBERON:0007625;9.91e-13;11!UBERON:0005629;9.92e-13;2!UBERON:0005358;9.92e-13;2!UBERON:0001886;9.92e-13;2!UBERON:0004086;9.92e-13;2!UBERON:0005282;9.92e-13;2!UBERON:0005281;9.92e-13;2!UBERON:0005284;4.36e-11;5!UBERON:0001801;5.96e-10;14!UBERON:0003210;1.46e-08;3!UBERON:0000019;2.91e-07;19!UBERON:0000047;2.91e-07;19!UBERON:0004088;2.91e-07;19!UBERON:0010230;2.91e-07;19!UBERON:0000970;6.93e-07;20!UBERON:0001764;9.23e-07;1!UBERON:0001825;9.23e-07;1!UBERON:0002506;9.23e-07;1!UBERON:0001769;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.05e-24,11;UBERON:0000488,7.22e-23,4;UBERON:0001778,8.16e-18,3;UBERON:0001775,8.16e-18,3;UBERON:0002203,2.60e-15,6;UBERON:0001768,2.60e-15,6;UBERON:0002200,2.60e-15,6;UBERON:0007625,8.14e-13,11;UBERON:0005629,8.86e-13,2;UBERON:0005358,8.86e-13,2;UBERON:0001886,8.86e-13,2;UBERON:0004086,8.86e-13,2;UBERON:0005282,8.86e-13,2;UBERON:0005281,8.86e-13,2;UBERON:0005284,3.95e-11,5;UBERON:0001801,5.12e-10,14;UBERON:0003210,1.02e-08,3;UBERON:0001764,6.02e-07,1;UBERON:0001825,6.02e-07,1;UBERON:0000019,6.26e-07,20;UBERON:0000047,6.26e-07,20;UBERON:0010312,6.26e-07,20;UBERON:0004088,6.26e-07,20;UBERON:0010230,6.26e-07,20;UBERON:0003072,6.26e-07,20;UBERON:0004128,6.26e-07,20;UBERON:0003071,6.26e-07,20;UBERON:0002506,8.98e-07,1;UBERON:0001769,8.98e-07,1 | |||
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| ||
|short_description=p@chr17:1013333..1013374,- | |||
}} | }} |
Latest revision as of 13:39, 25 July 2015
Short description: | p@chr17:1013333..1013374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1013333..1013374, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.16e-18 | 3 |
ciliated epithelial cell | 8.16e-18 | 3 |
multi-ciliated epithelial cell | 8.16e-18 | 3 |
non-pigmented ciliary epithelial cell | 8.16e-18 | 3 |
fibroblast of choroid plexus | 8.86e-13 | 2 |
leptomeningeal cell | 1.02e-08 | 3 |
perirenal preadipocyte | 7.57e-07 | 1 |
pigment cell (sensu Vertebrata) | 8.98e-07 | 1 |
iris pigment epithelial cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 1.05e-24 | 11 |
atypical epithelium | 7.22e-23 | 4 |
ciliary epithelium | 8.16e-18 | 3 |
ciliary body | 8.16e-18 | 3 |
vasculature of eye | 2.60e-15 | 6 |
uvea | 2.60e-15 | 6 |
vasculature of head | 2.60e-15 | 6 |
pigment epithelium of eye | 8.14e-13 | 11 |
vascular plexus | 8.86e-13 | 2 |
ventricle of nervous system | 8.86e-13 | 2 |
choroid plexus | 8.86e-13 | 2 |
brain ventricle | 8.86e-13 | 2 |
ventricular system of brain | 8.86e-13 | 2 |
ventricular system of central nervous system | 8.86e-13 | 2 |
brain vasculature | 3.95e-11 | 5 |
anterior segment of eyeball | 5.12e-10 | 14 |
blood-cerebrospinal fluid barrier | 1.02e-08 | 3 |
maxillary sinus | 6.02e-07 | 1 |
paranasal sinus | 6.02e-07 | 1 |
camera-type eye | 6.26e-07 | 20 |
simple eye | 6.26e-07 | 20 |
immature eye | 6.26e-07 | 20 |
ocular region | 6.26e-07 | 20 |
eyeball of camera-type eye | 6.26e-07 | 20 |
optic cup | 6.26e-07 | 20 |
optic vesicle | 6.26e-07 | 20 |
eye primordium | 6.26e-07 | 20 |
iris epithelium | 8.98e-07 | 1 |
iris | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.36e-07 | 1 |
chondrosarcoma | 3.57e-07 | 1 |
extraosseous chondrosarcoma | 3.57e-07 | 1 |
myxoid chondrosarcoma | 3.57e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.57e-07 | 1 |
osteosarcoma | 5.06e-07 | 1 |
paranasal sinus cancer | 6.02e-07 | 1 |
maxillary sinus cancer | 6.02e-07 | 1 |