FFCP PHASE1:Hg19::chr9:137735010..137735027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_AK122763_5end | |association_with_transcript=47bp_to_AK122763_5end | ||
|cluster_id=chr9:137735010..137735027,+ | |||
|description=CAGE_peak_18_at_COL5A1_5end | |description=CAGE_peak_18_at_COL5A1_5end | ||
|id=chr9:137735010..137735027,+ | |id=chr9:137735010..137735027,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.22e-08!180;CL:0002334!1.31e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.22e-08!180;CL:0002334!1.31e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000197;4.20e-17;6!CL:0000098;4.20e-17;6!CL:0002167;4.20e-17;6!CL:0000349;3.45e-16;19!CL:0002537;3.22e-12;5!CL:0002577;4.79e-10;3!CL:0000135;1.15e-09;3!CL:0002579;1.15e-09;3!CL:0000388;1.15e-09;3!CL:0002580;2.11e-09;3!CL:0002590;2.11e-09;3!CL:0002334;9.24e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,4.04e-17,6;CL:0000098,4.04e-17,6;CL:0002167,4.04e-17,6;CL:0000349,2.94e-16,19;CL:0002537,3.41e-12,5;CL:0002577,4.02e-10,3;CL:0000135,7.81e-10,3;CL:0000388,7.81e-10,3;CL:0002580,1.57e-09,3;CL:0002579,1.64e-09,3;CL:0002590,2.03e-09,3;CL:0002334,9.45e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.39e-09!14;UBERON:0000158!8.39e-09!14;UBERON:0000478!5.64e-07!24 | |ontology_enrichment_uberon=UBERON:0005631!8.39e-09!14;UBERON:0000158!8.39e-09!14;UBERON:0000478!5.64e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.22e-12;24!UBERON:0005631;1.01e-10;10!UBERON:0000158;1.01e-10;10!UBERON:0007846;1.15e-09;3!UBERON:0000043;1.15e-09;3!UBERON:0007845;1.15e-09;3!UBERON:0000305;7.21e-09;7!UBERON:0005795;4.50e-08;1!UBERON:0002426;4.50e-08;1!UBERON:0003831;4.50e-08;1!UBERON:0003898;4.50e-08;1!UBERON:0004830;4.50e-08;1!UBERON:0003830;4.50e-08;1!UBERON:0005175;4.50e-08;1!UBERON:0001774;4.50e-08;1!UBERON:0001103;4.50e-08;1!UBERON:0001987;9.73e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.25e-16,14;UBERON:0000158,1.25e-16,14;UBERON:0000478,1.08e-12,24;UBERON:0007846,7.81e-10,3;UBERON:0000043,7.81e-10,3;UBERON:0007845,7.81e-10,3;UBERON:0003124,2.05e-09,7;UBERON:0000305,7.52e-09,7;UBERON:0002426,5.33e-08,1;UBERON:0003831,5.33e-08,1;UBERON:0003898,5.33e-08,1;UBERON:0004830,5.33e-08,1;UBERON:0003830,5.33e-08,1;UBERON:0005175,5.33e-08,1;UBERON:0001774,5.33e-08,1;UBERON:0001103,5.33e-08,1;UBERON:0010084,5.33e-08,1;UBERON:0004871,8.43e-08,8;UBERON:0001987,8.53e-08,4;UBERON:0004340,8.53e-08,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.511450247374121,0,0,0.289693037921647,0,2.43317435151318,0,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0.286836620748814,0.354668382198357,0,0,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.751190294532984,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,1.5189869901714,0.194874010322397,0,0.184099797284599,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.330881918197182,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0.428933980974443,1.62786481617433,0,0,3.19852753868291,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.24782516918484,1.96271887676878,1.10391690523754,1.28855556491985,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,3.32870879020994,2.72151263996712,0.744323423456331,1.84154367945675,1.40330047216537,1.02511319404561,0,2.57366273829772,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.116210378459959,0,0,0,0.574072240823034,0,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,1.71567174531442,0,0.42793898803392,0,0,0,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,2.25972794330179,1.07001315444375,0,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,1.48482340416319,0,0,0,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0.91153644677601,0,0,0,4.14701507651495,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0.57785949122191,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.495743057036009,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60396512716726,1.84870251452567,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0.714193294391221,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03448089157869,0,0,0 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|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.511450247374121,0,0,0.289693037921647,0,2.43317435151318,0,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0.286836620748814,0.354668382198357,0,0,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.751190294532984,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,1.5189869901714,0.194874010322397,0,0.184099797284599,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.330881918197182,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0.428933980974443,1.62786481617433,0,0,3.19852753868291,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.24782516918484,1.96271887676878,1.10391690523754,1.28855556491985,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,3.32870879020994,2.72151263996712,0.744323423456331,1.84154367945675,1.40330047216537,1.02511319404561,0,2.57366273829772,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.116210378459959,0,0,0,0.574072240823034,0,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,1.71567174531442,0,0.42793898803392,0,0,0,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,2.25972794330179,1.07001315444375,0,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,1.48482340416319,0,0,0,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0.91153644677601,0,0,0,4.14701507651495,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0.57785949122191,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.495743057036009,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60396512716726,1.84870251452567,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0.714193294391221,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03448089157869,0,0,0 | ||
|short_description=p18@COL5A1 | |short_description=p18@COL5A1 | ||
}} | }} |
Latest revision as of 09:25, 16 September 2015
Short description: | p18@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_COL5A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_AK122763_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 4.04e-17 | 6 |
sensory epithelial cell | 4.04e-17 | 6 |
olfactory epithelial cell | 4.04e-17 | 6 |
extraembryonic cell | 2.94e-16 | 19 |
amnion mesenchymal stem cell | 3.41e-12 | 5 |
placental epithelial cell | 4.02e-10 | 3 |
fibrocyte | 7.81e-10 | 3 |
tendon cell | 7.81e-10 | 3 |
preadipocyte of the breast | 1.57e-09 | 3 |
omentum preadipocyte | 1.64e-09 | 3 |
smooth muscle cell of the brain vasculature | 2.03e-09 | 3 |
preadipocyte | 9.45e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.25e-16 | 14 |
membranous layer | 1.25e-16 | 14 |
extraembryonic structure | 1.08e-12 | 24 |
dense regular connective tissue | 7.81e-10 | 3 |
tendon | 7.81e-10 | 3 |
regular connective tissue | 7.81e-10 | 3 |
chorion | 2.05e-09 | 7 |
amnion | 7.52e-09 | 7 |
chest muscle | 5.33e-08 | 1 |
respiratory system muscle | 5.33e-08 | 1 |
skeletal muscle of trunk | 5.33e-08 | 1 |
respiratory system skeletal muscle | 5.33e-08 | 1 |
thoracic segment muscle | 5.33e-08 | 1 |
chest organ | 5.33e-08 | 1 |
muscle of trunk | 5.33e-08 | 1 |
diaphragm | 5.33e-08 | 1 |
future diaphragm | 5.33e-08 | 1 |
somatic layer of lateral plate mesoderm | 8.43e-08 | 8 |
placenta | 8.53e-08 | 4 |
allantois | 8.53e-08 | 4 |