FFCP PHASE1:Hg19::chr17:75284354..75284366,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:75284354..75284366,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr17:75284354..75284366,+ | |description=CAGE_peak_at_chr17:75284354..75284366,+ | ||
|id=chr17:75284354..75284366,+ | |id=chr17:75284354..75284366,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.98e-22!254;CL:0000223!3.32e-20!59;CL:0002076!2.55e-15!43;CL:0002149!1.70e-09!6;CL:0002255!1.70e-09!6;CL:0002621!2.14e-07!3;CL:0002178!2.90e-07!3;CL:0002251!6.76e-07!21 | |ontology_enrichment_celltype=CL:0000066!8.98e-22!254;CL:0000223!3.32e-20!59;CL:0002076!2.55e-15!43;CL:0002149!1.70e-09!6;CL:0002255!1.70e-09!6;CL:0002621!2.14e-07!3;CL:0002178!2.90e-07!3;CL:0002251!6.76e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002149;6.70e-12;6!CL:0002255;6.70e-12;6!CL:0002076;1.13e-08;42!CL:0000322;9.11e-07;3!CL:0002231;9.11e-07;3!CL:0002178;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.21e-17,58;CL:0002149,5.68e-12,6;CL:0002255,5.68e-12,6;CL:0002076,7.77e-10,42;CL:0002231,8.15e-07,3;CL:0000322,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.78e-13;58!UBERON:0007297;9.87e-10;2 | |||
|ontology_enrichment_disease=DOID:305!9.59e-32!106;DOID:0050687!7.20e-24!143;DOID:162!1.76e-13!235;DOID:14566!6.58e-13!239;DOID:299!6.72e-12!25;DOID:3001!1.70e-09!6 | |ontology_enrichment_disease=DOID:305!9.59e-32!106;DOID:0050687!7.20e-24!143;DOID:162!1.76e-13!235;DOID:14566!6.58e-13!239;DOID:299!6.72e-12!25;DOID:3001!1.70e-09!6 | ||
|ontology_enrichment_disease_v019=DOID:3001;6.70e-12;6!DOID:4074;1.57e-09;2!DOID:4905;1.57e-09;2!DOID:3910;1.57e-09;2!DOID:3498;1.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.68e-12,6;DOID:3910,1.44e-09,2;DOID:4074,1.71e-09,2;DOID:4905,1.71e-09,2;DOID:3498,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.94e-15!169;UBERON:0000925!4.94e-15!169;UBERON:0006595!4.94e-15!169;UBERON:0001007!6.50e-13!155;UBERON:0001555!6.50e-13!155;UBERON:0007026!6.50e-13!155;UBERON:0001041!1.10e-11!98;UBERON:0000077!9.05e-11!130;UBERON:0004921!1.02e-10!129;UBERON:0004185!1.02e-10!129;UBERON:0001004!1.91e-09!72;UBERON:0001737!2.67e-08!9;UBERON:0005177!1.11e-07!107;UBERON:0001949!2.14e-07!3;UBERON:0000466!2.41e-07!126;UBERON:0002294!2.67e-07!7;UBERON:0001173!2.67e-07!7;UBERON:0004912!2.67e-07!7;UBERON:0000065!2.80e-07!53;UBERON:0005911!3.04e-07!82;UBERON:0007499!4.21e-07!25;UBERON:0009497!6.74e-07!25;UBERON:0000015!6.74e-07!25;UBERON:0002423!6.74e-07!25;UBERON:0006235!6.74e-07!25;UBERON:0004161!6.74e-07!25;UBERON:0009856!9.54e-07!26;UBERON:0008947!9.82e-07!38;UBERON:0003258!9.82e-07!38 | |ontology_enrichment_uberon=UBERON:0004119!4.94e-15!169;UBERON:0000925!4.94e-15!169;UBERON:0006595!4.94e-15!169;UBERON:0001007!6.50e-13!155;UBERON:0001555!6.50e-13!155;UBERON:0007026!6.50e-13!155;UBERON:0001041!1.10e-11!98;UBERON:0000077!9.05e-11!130;UBERON:0004921!1.02e-10!129;UBERON:0004185!1.02e-10!129;UBERON:0001004!1.91e-09!72;UBERON:0001737!2.67e-08!9;UBERON:0005177!1.11e-07!107;UBERON:0001949!2.14e-07!3;UBERON:0000466!2.41e-07!126;UBERON:0002294!2.67e-07!7;UBERON:0001173!2.67e-07!7;UBERON:0004912!2.67e-07!7;UBERON:0000065!2.80e-07!53;UBERON:0005911!3.04e-07!82;UBERON:0007499!4.21e-07!25;UBERON:0009497!6.74e-07!25;UBERON:0000015!6.74e-07!25;UBERON:0002423!6.74e-07!25;UBERON:0006235!6.74e-07!25;UBERON:0004161!6.74e-07!25;UBERON:0009856!9.54e-07!26;UBERON:0008947!9.82e-07!38;UBERON:0003258!9.82e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;4.08e-18;1!UBERON:0004903;1.57e-09;2!UBERON:0002173;1.57e-09;2!UBERON:0002186;1.57e-09;2!UBERON:0002107;1.40e-08;19!UBERON:0006925;1.40e-08;19!UBERON:0004175;1.08e-07;21!UBERON:0000058;1.40e-07;10!UBERON:0006947;6.69e-07;3!UBERON:0004054;6.69e-07;3!UBERON:0004821;9.11e-07;3!UBERON:0007499;9.11e-07;3!UBERON:0003215;9.11e-07;3!UBERON:0010368;9.11e-07;3!UBERON:0009911;9.11e-07;3!UBERON:0002299;9.11e-07;3!UBERON:0006524;9.11e-07;3!UBERON:0008874;9.11e-07;3!UBERON:0002169;9.11e-07;3!UBERON:0004894;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.44e-18,1;UBERON:0007499,4.94e-11,25;UBERON:0009856,1.28e-10,26;UBERON:0004903,1.44e-09,2;UBERON:0002173,1.44e-09,2;UBERON:0002186,1.44e-09,2;UBERON:0002107,1.38e-08,19;UBERON:0006925,1.38e-08,19;UBERON:0008836,1.38e-08,19;UBERON:0005172,9.15e-08,54;UBERON:0005173,9.15e-08,54;UBERON:0005177,1.20e-07,101;UBERON:0008835,1.73e-07,22;UBERON:0003894,1.73e-07,22;UBERON:0009854,3.48e-07,23;UBERON:0002417,5.51e-07,60;UBERON:0000916,5.51e-07,60;UBERON:0006947,6.88e-07,3;UBERON:0004054,6.88e-07,3;UBERON:0004821,8.62e-07,3;UBERON:0003215,8.62e-07,3;UBERON:0010368,8.62e-07,3;UBERON:0009911,8.62e-07,3;UBERON:0002299,8.62e-07,3;UBERON:0006524,8.62e-07,3;UBERON:0008874,8.62e-07,3;UBERON:0002169,8.62e-07,3;UBERON:0004894,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0,0.653638332277218,0.474541238222193,0.269662616320329,0,0.38474715694639,0,0,0,0,13.9430538304014,3.9313088667105,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.515205058238611,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.1137934482855,1.5255219017566,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,1.21390189767046,0,0,0,0,0,0,0,0.330991955875499,0,0,1.70765727617876,0.277349346026277,0.347119476670262,0,0.0870592065804026,4.54289337429278,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.617792886840502,0,0,0,0,0.391102765469606,0,0.213452994739353,0.19980960958213,1.00863292007874,0,0,0,0.124252535565433,0.942776138467182,0.951329442515298,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0.104909176269996,0,0.717149357331379,0,0,0,1.017074150619,0,0,0,0,0,0,0,4.54311924402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0.31020638566432,0,0,0.294450700845729,0.243835849964539,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,6.58444214906132,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.286888821570705,0,0.325613074443898,0,0,0.359300808426348,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0,0.653638332277218,0.474541238222193,0.269662616320329,0,0.38474715694639,0,0,0,0,13.9430538304014,3.9313088667105,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.515205058238611,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.1137934482855,1.5255219017566,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,1.21390189767046,0,0,0,0,0,0,0,0.330991955875499,0,0,1.70765727617876,0.277349346026277,0.347119476670262,0,0.0870592065804026,4.54289337429278,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.617792886840502,0,0,0,0,0.391102765469606,0,0.213452994739353,0.19980960958213,1.00863292007874,0,0,0,0.124252535565433,0.942776138467182,0.951329442515298,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0.104909176269996,0,0.717149357331379,0,0,0,1.017074150619,0,0,0,0,0,0,0,4.54311924402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0.31020638566432,0,0,0.294450700845729,0.243835849964539,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,6.58444214906132,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.286888821570705,0,0.325613074443898,0,0,0.359300808426348,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr17:75284354..75284366,+ | |short_description=p@chr17:75284354..75284366,+ | ||
}} | }} |
Latest revision as of 21:41, 25 July 2015
Short description: | p@chr17:75284354..75284366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75284354..75284366, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.21e-17 | 58 |
epithelial cell of uterus | 5.68e-12 | 6 |
stromal cell of endometrium | 5.68e-12 | 6 |
endo-epithelial cell | 7.77e-10 | 42 |
epithelial cell of prostate | 8.15e-07 | 3 |
pneumocyte | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 4.44e-18 | 1 |
epithelial sac | 4.94e-11 | 25 |
sac | 1.28e-10 | 26 |
bronchoalveolar duct junction | 1.44e-09 | 2 |
alveolar duct | 1.44e-09 | 2 |
bronchiole | 1.44e-09 | 2 |
liver | 1.38e-08 | 19 |
digestive gland | 1.38e-08 | 19 |
liver bud | 1.38e-08 | 19 |
abdomen element | 9.15e-08 | 54 |
abdominal segment element | 9.15e-08 | 54 |
trunk region element | 1.20e-07 | 101 |
hepatic diverticulum | 1.73e-07 | 22 |
liver primordium | 1.73e-07 | 22 |
digestive tract diverticulum | 3.48e-07 | 23 |
abdominal segment of trunk | 5.51e-07 | 60 |
abdomen | 5.51e-07 | 60 |
male genital duct | 6.88e-07 | 3 |
internal male genitalia | 6.88e-07 | 3 |
pulmonary alveolus epithelium | 8.62e-07 | 3 |
alveolus | 8.62e-07 | 3 |
pulmonary lobule | 8.62e-07 | 3 |
lobule | 8.62e-07 | 3 |
alveolus of lung | 8.62e-07 | 3 |
alveolar system | 8.62e-07 | 3 |
pulmonary acinus | 8.62e-07 | 3 |
alveolar sac | 8.62e-07 | 3 |
alveolar wall | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.68e-12 | 6 |
lung adenocarcinoma | 1.44e-09 | 2 |
pancreas adenocarcinoma | 1.71e-09 | 2 |
pancreatic carcinoma | 1.71e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.71e-09 | 2 |