FFCP PHASE1:Hg19::chr18:19062625..19062629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:19062625..19062629,+ | |||
|description=CAGE_peak_at_chr18:19062625..19062629,+ | |description=CAGE_peak_at_chr18:19062625..19062629,+ | ||
|id=chr18:19062625..19062629,+ | |id=chr18:19062625..19062629,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.00e-07;7!CL:0000586;1.00e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.64e-08,7;CL:0000586,8.64e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.18e-13;1!UBERON:0010227;5.70e-13;1!UBERON:0005425;5.70e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.18e-13;1!DOID:10165;2.18e-13;1!DOID:1798;2.18e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.06e-13,1;DOID:10165,2.06e-13,1;DOID:1798,2.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.55e-17!57;UBERON:0005068!1.55e-17!57;UBERON:0006241!1.55e-17!57;UBERON:0007135!1.55e-17!57;UBERON:0000073!8.56e-17!94;UBERON:0001016!8.56e-17!94;UBERON:0002616!1.71e-16!59;UBERON:0000955!2.74e-16!69;UBERON:0006238!2.74e-16!69;UBERON:0001017!4.83e-16!82;UBERON:0005743!1.47e-15!86;UBERON:0002020!4.59e-13!34;UBERON:0003528!4.59e-13!34;UBERON:0003075!6.34e-13!86;UBERON:0007284!6.34e-13!86;UBERON:0007023!7.16e-13!115;UBERON:0002346!1.01e-12!90;UBERON:0001893!2.44e-12!34;UBERON:0002791!7.91e-12!33;UBERON:0002308!1.81e-11!9;UBERON:0000125!1.81e-11!9;UBERON:0003080!3.40e-11!42;UBERON:0001869!6.66e-11!32;UBERON:0002780!2.37e-10!41;UBERON:0001890!2.37e-10!41;UBERON:0006240!2.37e-10!41;UBERON:0002298!6.40e-10!8;UBERON:0004732!8.17e-10!13;UBERON:0009663!3.92e-09!7;UBERON:0002420!4.38e-09!9;UBERON:0007245!4.38e-09!9;UBERON:0010009!4.38e-09!9;UBERON:0010011!4.38e-09!9;UBERON:0000454!4.38e-09!9;UBERON:0000924!8.15e-09!173;UBERON:0006601!8.15e-09!173;UBERON:0004121!8.59e-09!169;UBERON:0004733!1.32e-08!12;UBERON:0002028!1.32e-08!12;UBERON:0007277!1.32e-08!12;UBERON:0003076!5.24e-08!15;UBERON:0003057!5.24e-08!15;UBERON:0000064!5.59e-08!219;UBERON:0000033!1.67e-07!123;UBERON:0000153!3.54e-07!129;UBERON:0007811!3.54e-07!129;UBERON:0003056!4.42e-07!61 | |ontology_enrichment_uberon=UBERON:0001049!1.55e-17!57;UBERON:0005068!1.55e-17!57;UBERON:0006241!1.55e-17!57;UBERON:0007135!1.55e-17!57;UBERON:0000073!8.56e-17!94;UBERON:0001016!8.56e-17!94;UBERON:0002616!1.71e-16!59;UBERON:0000955!2.74e-16!69;UBERON:0006238!2.74e-16!69;UBERON:0001017!4.83e-16!82;UBERON:0005743!1.47e-15!86;UBERON:0002020!4.59e-13!34;UBERON:0003528!4.59e-13!34;UBERON:0003075!6.34e-13!86;UBERON:0007284!6.34e-13!86;UBERON:0007023!7.16e-13!115;UBERON:0002346!1.01e-12!90;UBERON:0001893!2.44e-12!34;UBERON:0002791!7.91e-12!33;UBERON:0002308!1.81e-11!9;UBERON:0000125!1.81e-11!9;UBERON:0003080!3.40e-11!42;UBERON:0001869!6.66e-11!32;UBERON:0002780!2.37e-10!41;UBERON:0001890!2.37e-10!41;UBERON:0006240!2.37e-10!41;UBERON:0002298!6.40e-10!8;UBERON:0004732!8.17e-10!13;UBERON:0009663!3.92e-09!7;UBERON:0002420!4.38e-09!9;UBERON:0007245!4.38e-09!9;UBERON:0010009!4.38e-09!9;UBERON:0010011!4.38e-09!9;UBERON:0000454!4.38e-09!9;UBERON:0000924!8.15e-09!173;UBERON:0006601!8.15e-09!173;UBERON:0004121!8.59e-09!169;UBERON:0004733!1.32e-08!12;UBERON:0002028!1.32e-08!12;UBERON:0007277!1.32e-08!12;UBERON:0003076!5.24e-08!15;UBERON:0003057!5.24e-08!15;UBERON:0000064!5.59e-08!219;UBERON:0000033!1.67e-07!123;UBERON:0000153!3.54e-07!129;UBERON:0007811!3.54e-07!129;UBERON:0003056!4.42e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;5.70e-13;1!UBERON:0001874;5.70e-13;1!UBERON:0001000;5.70e-13;1!UBERON:0000941;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0005352;5.70e-13;1!UBERON:0001876;4.04e-07;2!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2!UBERON:0002081;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,2.95e-13,1;UBERON:0005352,2.95e-13,1;UBERON:0002079,4.23e-13,1;UBERON:0000941,4.77e-13,1;UBERON:0001785,4.77e-13,1;UBERON:0002464,4.77e-13,1;UBERON:0004904,4.77e-13,1;UBERON:0001021,4.77e-13,1;UBERON:0003902,4.77e-13,1;UBERON:0005425,4.77e-13,1;UBERON:0001874,6.82e-13,1;UBERON:0001876,3.28e-07,2;UBERON:0002081,3.48e-07,2;UBERON:0010227,3.48e-07,2;UBERON:0003714,3.70e-07,2;UBERON:0005162,3.70e-07,2;UBERON:0000122,3.70e-07,2 | |||
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| ||
|short_description=p@chr18:19062625..19062629,+ | |short_description=p@chr18:19062625..19062629,+ | ||
}} | }} |
Latest revision as of 23:50, 25 July 2015
Short description: | p@chr18:19062625..19062629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19062625..19062629, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.64e-08 | 7 |
germ cell | 8.64e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 2.95e-13 | 1 |
spermatic cord | 2.95e-13 | 1 |
left cardiac atrium | 4.23e-13 | 1 |
cranial nerve II | 4.77e-13 | 1 |
cranial nerve | 4.77e-13 | 1 |
nerve trunk | 4.77e-13 | 1 |
nerve connecting eye with brain | 4.77e-13 | 1 |
nerve | 4.77e-13 | 1 |
retinal neural layer | 4.77e-13 | 1 |
presumptive neural retina | 4.77e-13 | 1 |
putamen | 6.82e-13 | 1 |
amygdala | 3.28e-07 | 2 |
cardiac atrium | 3.48e-07 | 2 |
future cardiac atrium | 3.48e-07 | 2 |
neural tissue | 3.70e-07 | 2 |
multi cell component structure | 3.70e-07 | 2 |
neuron projection bundle | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.06e-13 | 1 |
endocrine pancreas cancer | 2.06e-13 | 1 |
pancreatic endocrine carcinoma | 2.06e-13 | 1 |