FFCP PHASE1:Hg19::chr2:102608616..102608628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:102608616..102608628,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr2:102608616..102608628,+ | |description=CAGE_peak_at_chr2:102608616..102608628,+ | ||
|id=chr2:102608616..102608628,+ | |id=chr2:102608616..102608628,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.25e-43!42;CL:0000860!1.34e-39!45;CL:0000766!8.51e-29!76;CL:0002009!5.44e-26!65;CL:0002194!3.98e-25!63;CL:0000576!3.98e-25!63;CL:0000040!3.98e-25!63;CL:0000559!3.98e-25!63;CL:0000557!4.67e-23!71;CL:0000839!8.98e-22!70;CL:0000763!1.42e-17!112;CL:0000049!1.42e-17!112;CL:0000738!6.76e-16!140;CL:0002087!4.26e-13!119;CL:0002031!2.52e-11!124;CL:0000037!5.46e-11!172;CL:0000566!5.46e-11!172;CL:0002032!2.62e-10!165;CL:0000837!2.62e-10!165;CL:0000988!7.80e-10!182;CL:0000775!7.94e-09!3;CL:0000094!2.98e-08!8 | |ontology_enrichment_celltype=CL:0002057!4.25e-43!42;CL:0000860!1.34e-39!45;CL:0000766!8.51e-29!76;CL:0002009!5.44e-26!65;CL:0002194!3.98e-25!63;CL:0000576!3.98e-25!63;CL:0000040!3.98e-25!63;CL:0000559!3.98e-25!63;CL:0000557!4.67e-23!71;CL:0000839!8.98e-22!70;CL:0000763!1.42e-17!112;CL:0000049!1.42e-17!112;CL:0000738!6.76e-16!140;CL:0002087!4.26e-13!119;CL:0002031!2.52e-11!124;CL:0000037!5.46e-11!172;CL:0000566!5.46e-11!172;CL:0002032!2.62e-10!165;CL:0000837!2.62e-10!165;CL:0000988!7.80e-10!182;CL:0000775!7.94e-09!3;CL:0000094!2.98e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-31;33!CL:0002057;1.76e-31;33!CL:0000094;1.16e-30;8!CL:0000775;3.60e-30;3!CL:0000081;2.69e-22;11!CL:0000473;6.76e-22;39!CL:0000234;6.76e-22;39!CL:0000771;1.08e-20;2!CL:0000576;3.89e-16;48!CL:0000766;9.85e-14;69!CL:0000763;2.00e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.23e-31,72;CL:0000094,1.16e-30,8;CL:0000775,3.43e-30,3;CL:0000860,1.27e-25,42;CL:0002057,1.27e-25,42;CL:0000081,2.69e-22,11;CL:0000473,3.22e-22,48;CL:0000234,3.22e-22,48;CL:0000771,1.14e-20,2;CL:0000763,5.15e-20,108;CL:0000049,5.15e-20,108;CL:0002194,1.90e-17,59;CL:0000576,1.90e-17,59;CL:0000040,1.90e-17,59;CL:0000559,1.90e-17,59;CL:0002009,7.83e-17,61;CL:0000839,1.88e-15,66;CL:0000738,2.09e-15,136;CL:0000557,3.35e-15,67;CL:0002032,1.24e-12,161;CL:0000837,1.24e-12,161;CL:0000037,5.32e-12,168;CL:0000988,2.92e-11,177;CL:0002087,3.26e-08,115;CL:0002031,8.38e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-19;42!CL:0000049;4.47e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.65e-32!102;UBERON:0003061!2.65e-32!102;UBERON:0002193!1.39e-31!112;UBERON:0002405!6.32e-20!115;UBERON:0002371!1.73e-19!80;UBERON:0007023!6.31e-19!115;UBERON:0001474!1.56e-17!86;UBERON:0004765!1.11e-13!101;UBERON:0001434!1.11e-13!101;UBERON:0003081!6.89e-12!216;UBERON:0000178!2.62e-11!15;UBERON:0000179!2.62e-11!15;UBERON:0000463!2.62e-11!15 | |ontology_enrichment_uberon=UBERON:0002390!2.65e-32!102;UBERON:0003061!2.65e-32!102;UBERON:0002193!1.39e-31!112;UBERON:0002405!6.32e-20!115;UBERON:0002371!1.73e-19!80;UBERON:0007023!6.31e-19!115;UBERON:0001474!1.56e-17!86;UBERON:0004765!1.11e-13!101;UBERON:0001434!1.11e-13!101;UBERON:0003081!6.89e-12!216;UBERON:0000178!2.62e-11!15;UBERON:0000179!2.62e-11!15;UBERON:0000463!2.62e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.27e-10;1!UBERON:0000178;4.00e-10;15!UBERON:0000179;4.00e-10;15!UBERON:0000463;4.00e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.45e-19,108;UBERON:0002390,5.54e-19,98;UBERON:0003061,5.54e-19,98;UBERON:0002371,3.14e-13,76;UBERON:0002405,1.23e-12,93;UBERON:0001474,3.76e-12,82;UBERON:0004765,6.18e-11,90;UBERON:0000029,9.05e-11,1;UBERON:0000178,4.63e-10,15;UBERON:0000179,4.63e-10,15;UBERON:0000463,4.63e-10,15;UBERON:0001434,1.10e-09,100;UBERON:0003081,5.81e-08,203 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.651032612147555,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,2.32429036905685,0.411167888021826,3.71647645074124,2.01384674625505,0.512321413058201,1.41889337933151,2.06847408441971,2.5819387343353,0,2.25890807451126,1.36453075028923,0.449446968890169,3.36692281607993,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.870627715885752,1.70215567407342,0.622822248995575,3.26623264833766,0.521482918420201,0.65156653411535,0,0.368277635987565,0,0,0,0,0.22465726229299,0.450530678524519,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.9451043590158,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,27.7132598860457,50.8574480646842,23.621684265854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,1.52234282769651,0,1.13929437434833,0.238231775457789,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0.751871343838829,0.515663103788617,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0.202117188958219,0.435433495793923,0,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:102608616..102608628,+ | |short_description=p@chr2:102608616..102608628,+ | ||
}} | }} |
Latest revision as of 22:47, 28 July 2015
Short description: | p@chr2:102608616..102608628, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:102608616..102608628, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.23e-31 | 72 |
granulocyte | 1.16e-30 | 8 |
neutrophil | 3.43e-30 | 3 |
classical monocyte | 1.27e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-25 | 42 |
blood cell | 2.69e-22 | 11 |
defensive cell | 3.22e-22 | 48 |
phagocyte | 3.22e-22 | 48 |
eosinophil | 1.14e-20 | 2 |
myeloid cell | 5.15e-20 | 108 |
common myeloid progenitor | 5.15e-20 | 108 |
monopoietic cell | 1.90e-17 | 59 |
monocyte | 1.90e-17 | 59 |
monoblast | 1.90e-17 | 59 |
promonocyte | 1.90e-17 | 59 |
macrophage dendritic cell progenitor | 7.83e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.88e-15 | 66 |
leukocyte | 2.09e-15 | 136 |
granulocyte monocyte progenitor cell | 3.35e-15 | 67 |
hematopoietic oligopotent progenitor cell | 1.24e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-12 | 161 |
hematopoietic stem cell | 5.32e-12 | 168 |
hematopoietic cell | 2.92e-11 | 177 |
nongranular leukocyte | 3.26e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.38e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.45e-19 | 108 |
hematopoietic system | 5.54e-19 | 98 |
blood island | 5.54e-19 | 98 |
bone marrow | 3.14e-13 | 76 |
immune system | 1.23e-12 | 93 |
bone element | 3.76e-12 | 82 |
skeletal element | 6.18e-11 | 90 |
lymph node | 9.05e-11 | 1 |
blood | 4.63e-10 | 15 |
haemolymphatic fluid | 4.63e-10 | 15 |
organism substance | 4.63e-10 | 15 |
skeletal system | 1.10e-09 | 100 |
lateral plate mesoderm | 5.81e-08 | 203 |