FFCP PHASE1:Hg19::chr2:50201205..50201218,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_ENST00000484192,uc002rxa.3,uc010yon.1_5end | |association_with_transcript=85bp_to_ENST00000484192,uc002rxa.3,uc010yon.1_5end | ||
|cluster_id=chr2:50201205..50201218,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_31_at_NRXN1_5end | |description=CAGE_peak_31_at_NRXN1_5end | ||
|id=chr2:50201205..50201218,- | |id=chr2:50201205..50201218,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.01e-67;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.38e-96!57;UBERON:0005068!1.38e-96!57;UBERON:0006241!1.38e-96!57;UBERON:0007135!1.38e-96!57;UBERON:0002616!2.46e-87!59;UBERON:0001017!5.03e-78!82;UBERON:0000955!7.61e-78!69;UBERON:0006238!7.61e-78!69;UBERON:0001893!3.34e-77!34;UBERON:0002780!1.18e-75!41;UBERON:0001890!1.18e-75!41;UBERON:0006240!1.18e-75!41;UBERON:0001869!3.15e-75!32;UBERON:0005743!3.39e-74!86;UBERON:0003080!8.98e-74!42;UBERON:0002791!8.77e-73!33;UBERON:0002020!1.39e-70!34;UBERON:0003528!1.39e-70!34;UBERON:0000073!9.84e-67!94;UBERON:0001016!9.84e-67!94;UBERON:0003075!1.66e-66!86;UBERON:0007284!1.66e-66!86;UBERON:0002619!3.97e-65!22;UBERON:0002346!2.60e-63!90;UBERON:0000956!3.46e-57!25;UBERON:0000203!3.46e-57!25;UBERON:0001950!2.18e-55!20;UBERON:0007023!5.60e-52!115;UBERON:0003056!1.51e-49!61;UBERON:0000033!2.43e-44!123;UBERON:0000153!5.07e-42!129;UBERON:0007811!5.07e-42!129;UBERON:0004121!7.13e-35!169;UBERON:0000924!6.19e-34!173;UBERON:0006601!6.19e-34!173;UBERON:0000200!2.30e-32!6;UBERON:0000349!1.40e-27!5;UBERON:0000025!2.40e-24!194;UBERON:0001871!2.91e-24!7;UBERON:0003076!1.26e-22!15;UBERON:0003057!1.26e-22!15;UBERON:0000369!4.37e-22!4;UBERON:0002435!4.37e-22!4;UBERON:0000204!4.37e-22!4;UBERON:0010082!4.37e-22!4;UBERON:0004733!4.80e-22!12;UBERON:0002028!4.80e-22!12;UBERON:0007277!4.80e-22!12;UBERON:0002420!1.48e-21!9;UBERON:0007245!1.48e-21!9;UBERON:0010009!1.48e-21!9;UBERON:0010011!1.48e-21!9;UBERON:0000454!1.48e-21!9;UBERON:0004732!2.79e-20!13;UBERON:0004111!2.25e-18!241;UBERON:0001872!9.48e-18!5;UBERON:0002771!2.64e-17!3;UBERON:0005383!3.48e-17!3;UBERON:0005382!3.48e-17!3;UBERON:0000477!1.14e-15!286;UBERON:0002680!1.18e-15!9;UBERON:0001895!1.18e-15!9;UBERON:0010092!1.18e-15!9;UBERON:0000064!4.44e-15!219;UBERON:0002308!8.25e-15!9;UBERON:0000125!8.25e-15!9;UBERON:0000483!4.73e-14!309;UBERON:0000119!7.46e-14!312;UBERON:0009663!1.07e-12!7;UBERON:0001870!2.53e-12!2;UBERON:0001876!2.84e-12!2;UBERON:0001954!3.55e-12!2;UBERON:0003022!3.55e-12!2;UBERON:0002421!3.55e-12!2;UBERON:0002600!3.55e-12!2;UBERON:0001873!4.95e-12!2;UBERON:0010122!4.95e-12!2;UBERON:0000475!8.24e-12!365;UBERON:0002298!4.54e-11!8;UBERON:0002037!2.38e-09!6;UBERON:0006215!2.38e-09!6;UBERON:0000481!6.17e-09!347;UBERON:0000988!3.29e-08!3;UBERON:0001896!3.54e-08!3;UBERON:0005290!3.54e-08!3;UBERON:0010096!3.54e-08!3;UBERON:0000062!3.50e-07!511;UBERON:0002702!5.57e-07!1;UBERON:0001874!7.39e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!1.38e-96!57;UBERON:0005068!1.38e-96!57;UBERON:0006241!1.38e-96!57;UBERON:0007135!1.38e-96!57;UBERON:0002616!2.46e-87!59;UBERON:0001017!5.03e-78!82;UBERON:0000955!7.61e-78!69;UBERON:0006238!7.61e-78!69;UBERON:0001893!3.34e-77!34;UBERON:0002780!1.18e-75!41;UBERON:0001890!1.18e-75!41;UBERON:0006240!1.18e-75!41;UBERON:0001869!3.15e-75!32;UBERON:0005743!3.39e-74!86;UBERON:0003080!8.98e-74!42;UBERON:0002791!8.77e-73!33;UBERON:0002020!1.39e-70!34;UBERON:0003528!1.39e-70!34;UBERON:0000073!9.84e-67!94;UBERON:0001016!9.84e-67!94;UBERON:0003075!1.66e-66!86;UBERON:0007284!1.66e-66!86;UBERON:0002619!3.97e-65!22;UBERON:0002346!2.60e-63!90;UBERON:0000956!3.46e-57!25;UBERON:0000203!3.46e-57!25;UBERON:0001950!2.18e-55!20;UBERON:0007023!5.60e-52!115;UBERON:0003056!1.51e-49!61;UBERON:0000033!2.43e-44!123;UBERON:0000153!5.07e-42!129;UBERON:0007811!5.07e-42!129;UBERON:0004121!7.13e-35!169;UBERON:0000924!6.19e-34!173;UBERON:0006601!6.19e-34!173;UBERON:0000200!2.30e-32!6;UBERON:0000349!1.40e-27!5;UBERON:0000025!2.40e-24!194;UBERON:0001871!2.91e-24!7;UBERON:0003076!1.26e-22!15;UBERON:0003057!1.26e-22!15;UBERON:0000369!4.37e-22!4;UBERON:0002435!4.37e-22!4;UBERON:0000204!4.37e-22!4;UBERON:0010082!4.37e-22!4;UBERON:0004733!4.80e-22!12;UBERON:0002028!4.80e-22!12;UBERON:0007277!4.80e-22!12;UBERON:0002420!1.48e-21!9;UBERON:0007245!1.48e-21!9;UBERON:0010009!1.48e-21!9;UBERON:0010011!1.48e-21!9;UBERON:0000454!1.48e-21!9;UBERON:0004732!2.79e-20!13;UBERON:0004111!2.25e-18!241;UBERON:0001872!9.48e-18!5;UBERON:0002771!2.64e-17!3;UBERON:0005383!3.48e-17!3;UBERON:0005382!3.48e-17!3;UBERON:0000477!1.14e-15!286;UBERON:0002680!1.18e-15!9;UBERON:0001895!1.18e-15!9;UBERON:0010092!1.18e-15!9;UBERON:0000064!4.44e-15!219;UBERON:0002308!8.25e-15!9;UBERON:0000125!8.25e-15!9;UBERON:0000483!4.73e-14!309;UBERON:0000119!7.46e-14!312;UBERON:0009663!1.07e-12!7;UBERON:0001870!2.53e-12!2;UBERON:0001876!2.84e-12!2;UBERON:0001954!3.55e-12!2;UBERON:0003022!3.55e-12!2;UBERON:0002421!3.55e-12!2;UBERON:0002600!3.55e-12!2;UBERON:0001873!4.95e-12!2;UBERON:0010122!4.95e-12!2;UBERON:0000475!8.24e-12!365;UBERON:0002298!4.54e-11!8;UBERON:0002037!2.38e-09!6;UBERON:0006215!2.38e-09!6;UBERON:0000481!6.17e-09!347;UBERON:0000988!3.29e-08!3;UBERON:0001896!3.54e-08!3;UBERON:0005290!3.54e-08!3;UBERON:0010096!3.54e-08!3;UBERON:0000062!3.50e-07!511;UBERON:0002702!5.57e-07!1;UBERON:0001874!7.39e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002680;1.09e-39;9!UBERON:0001895;1.09e-39;9!UBERON:0002037;6.35e-34;6!UBERON:0004733;6.33e-30;12!UBERON:0002028;6.33e-30;12!UBERON:0004732;1.14e-27;13!UBERON:0000073;2.32e-17;53!UBERON:0002616;2.32e-17;53!UBERON:0002619;1.19e-15;22!UBERON:0000955;5.84e-14;68!UBERON:0000956;6.75e-14;25!UBERON:0000203;6.75e-14;25!UBERON:0001954;2.19e-12;2!UBERON:0003022;2.19e-12;2!UBERON:0002421;2.19e-12;2!UBERON:0002600;2.19e-12;2!UBERON:0002771;3.24e-12;2!UBERON:0001897;3.24e-12;2!UBERON:0010225;3.24e-12;2!UBERON:0001017;3.54e-11;75!UBERON:0001869;3.97e-11;32!UBERON:0001893;3.75e-10;34!UBERON:0002791;3.78e-10;32!UBERON:0001950;4.80e-10;20!UBERON:0001016;7.03e-10;83!UBERON:0003528;5.52e-09;34!UBERON:0002020;5.52e-09;34!UBERON:0000988;1.08e-08;3!UBERON:0002780;1.24e-08;41!UBERON:0001890;1.24e-08;41!UBERON:0002784;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.33e-39,9;UBERON:0001895,1.33e-39,9;UBERON:0010092,1.33e-39,9;UBERON:0002037,7.51e-34,6;UBERON:0006215,7.51e-34,6;UBERON:0000073,1.09e-32,53;UBERON:0002616,1.09e-32,53;UBERON:0001049,5.75e-31,56;UBERON:0005068,5.75e-31,56;UBERON:0006241,5.75e-31,56;UBERON:0007135,5.75e-31,56;UBERON:0004733,7.35e-30,12;UBERON:0002028,7.35e-30,12;UBERON:0007277,7.35e-30,12;UBERON:0004732,1.31e-27,13;UBERON:0000955,3.29e-25,68;UBERON:0006238,3.29e-25,68;UBERON:0003076,5.27e-24,15;UBERON:0003057,5.27e-24,15;UBERON:0001017,3.01e-21,81;UBERON:0003075,3.01e-21,82;UBERON:0007284,3.01e-21,82;UBERON:0002346,2.89e-20,86;UBERON:0001016,3.70e-19,89;UBERON:0010371,9.10e-17,104;UBERON:0002619,1.15e-15,22;UBERON:0007023,1.98e-15,114;UBERON:0000956,6.52e-14,25;UBERON:0000203,6.52e-14,25;UBERON:0002780,3.08e-13,41;UBERON:0001890,3.08e-13,41;UBERON:0003080,3.08e-13,41;UBERON:0006240,3.08e-13,41;UBERON:0010314,3.39e-13,132;UBERON:0001954,1.85e-12,2;UBERON:0003022,1.85e-12,2;UBERON:0002421,1.85e-12,2;UBERON:0002600,1.85e-12,2;UBERON:0001897,2.90e-12,2;UBERON:0010225,2.90e-12,2;UBERON:0002771,3.24e-12,2;UBERON:0002791,4.75e-11,32;UBERON:0001869,4.75e-11,32;UBERON:0003528,1.93e-10,34;UBERON:0002020,1.93e-10,34;UBERON:0001893,1.93e-10,34;UBERON:0001950,4.88e-10,20;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0003056,5.06e-09,61;UBERON:0000025,5.27e-09,192;UBERON:0000988,1.12e-08,3;UBERON:0011216,1.33e-07,223;UBERON:0004111,3.89e-07,240;UBERON:0002784,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,3.05163472634166,4.20201187738654,2.06883333267483,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,0.751145584238999,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,1.02558182120378,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,2.34323429584154,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,2.31097092121228,0.328863867814245,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,3.05163472634166,4.20201187738654,2.06883333267483,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,0.751145584238999,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,1.02558182120378,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,2.34323429584154,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,2.31097092121228,0.328863867814245,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p31@NRXN1 | |short_description=p31@NRXN1 | ||
}} | }} |
Latest revision as of 13:21, 17 September 2015
Short description: | p31@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_NRXN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 85bp_to_ENST00000484192, uc002rxa.3, uc010yon.1_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data