FFCP PHASE1:Hg19::chr10:17271052..17271064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17271052..17271064,- | |||
|description=CAGE_peak_at_chr10:17271052..17271064,- | |description=CAGE_peak_at_chr10:17271052..17271064,- | ||
|id=chr10:17271052..17271064,- | |id=chr10:17271052..17271064,- | ||
|ontology_enrichment_celltype=CL:0002057!2.47e-31!42;CL:0000860!6.64e-30!45;CL:0000766!3.28e-24!76;CL:0000557!7.59e-24!71;CL:0000839!6.93e-23!70;CL:0002194!5.73e-22!63;CL:0000576!5.73e-22!63;CL:0000040!5.73e-22!63;CL:0000559!5.73e-22!63;CL:0002009!6.99e-21!65;CL:0000738!1.81e-18!140;CL:0002087!3.46e-18!119;CL:0002031!3.80e-17!124;CL:0000763!1.40e-12!112;CL:0000049!1.40e-12!112;CL:0002320!1.60e-12!365;CL:0000988!2.14e-12!182;CL:0000037!2.55e-12!172;CL:0000566!2.55e-12!172;CL:0000134!8.05e-12!358;CL:0002032!1.47e-11!165;CL:0000837!1.47e-11!165;CL:0000219!2.22e-10!390;CL:0000034!3.26e-10!444;CL:0000048!3.63e-10!430;CL:0000723!1.28e-09!436 | |ontology_enrichment_celltype=CL:0002057!2.47e-31!42;CL:0000860!6.64e-30!45;CL:0000766!3.28e-24!76;CL:0000557!7.59e-24!71;CL:0000839!6.93e-23!70;CL:0002194!5.73e-22!63;CL:0000576!5.73e-22!63;CL:0000040!5.73e-22!63;CL:0000559!5.73e-22!63;CL:0002009!6.99e-21!65;CL:0000738!1.81e-18!140;CL:0002087!3.46e-18!119;CL:0002031!3.80e-17!124;CL:0000763!1.40e-12!112;CL:0000049!1.40e-12!112;CL:0002320!1.60e-12!365;CL:0000988!2.14e-12!182;CL:0000037!2.55e-12!172;CL:0000566!2.55e-12!172;CL:0000134!8.05e-12!358;CL:0002032!1.47e-11!165;CL:0000837!1.47e-11!165;CL:0000219!2.22e-10!390;CL:0000034!3.26e-10!444;CL:0000048!3.63e-10!430;CL:0000723!1.28e-09!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.05e-30;33!CL:0002057;2.05e-30;33!CL:0000473;1.04e-22;39!CL:0000234;1.04e-22;39!CL:0000576;2.28e-20;48!CL:0000766;5.79e-20;69!CL:0000623;2.38e-17;3!CL:0000763;1.50e-12;100!CL:0000097;2.48e-11;5!CL:0002087;2.88e-09;104!CL:0000767;9.77e-09;3!CL:0002032;8.97e-07;1!CL:0000557;8.97e-07;1!CL:0002591;8.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.21e-39,42;CL:0002057,2.21e-39,42;CL:0000766,3.32e-36,72;CL:0000557,1.86e-35,67;CL:0000473,5.70e-34,48;CL:0000234,5.70e-34,48;CL:0000839,1.03e-32,66;CL:0002194,2.15e-26,59;CL:0000576,2.15e-26,59;CL:0000040,2.15e-26,59;CL:0000559,2.15e-26,59;CL:0002009,2.04e-25,61;CL:0000763,7.97e-25,108;CL:0000049,7.97e-25,108;CL:0000738,1.32e-24,136;CL:0002031,6.17e-24,120;CL:0002032,1.07e-21,161;CL:0000837,1.07e-21,161;CL:0000037,1.47e-20,168;CL:0000988,3.14e-19,177;CL:0002087,1.16e-18,115;CL:0000623,2.67e-17,3;CL:0000825,2.67e-17,3;CL:0000097,2.36e-11,5;CL:0002028,2.36e-11,5;CL:0000767,9.80e-09,3;CL:0000134,1.57e-07,354;CL:0002320,2.85e-07,361;CL:0000034,7.57e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-30;42!CL:0000049;1.32e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.88e-29!102;UBERON:0003061!5.88e-29!102;UBERON:0002193!4.82e-28!112;UBERON:0002371!3.14e-24!80;UBERON:0001474!2.19e-22!86;UBERON:0004765!8.10e-22!101;UBERON:0001434!8.10e-22!101;UBERON:0002405!2.84e-19!115;UBERON:0003081!1.77e-14!216;UBERON:0002204!1.14e-12!167;UBERON:0002384!2.02e-11!375 | |ontology_enrichment_uberon=UBERON:0002390!5.88e-29!102;UBERON:0003061!5.88e-29!102;UBERON:0002193!4.82e-28!112;UBERON:0002371!3.14e-24!80;UBERON:0001474!2.19e-22!86;UBERON:0004765!8.10e-22!101;UBERON:0001434!8.10e-22!101;UBERON:0002405!2.84e-19!115;UBERON:0003081!1.77e-14!216;UBERON:0002204!1.14e-12!167;UBERON:0002384!2.02e-11!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.30e-31,76;UBERON:0001474,3.43e-28,82;UBERON:0004765,2.71e-25,90;UBERON:0002405,2.46e-24,93;UBERON:0002390,7.26e-23,98;UBERON:0003061,7.26e-23,98;UBERON:0001434,2.56e-22,100;UBERON:0002193,2.48e-20,108;UBERON:0002204,3.33e-14,167;UBERON:0003081,3.21e-13,203;UBERON:0000926,2.13e-07,315;UBERON:0004120,2.13e-07,315;UBERON:0006603,2.13e-07,315;UBERON:0002384,6.45e-07,371 | |||
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|short_description=p@chr10:17271052..17271064,- | |short_description=p@chr10:17271052..17271064,- | ||
}} | }} |
Latest revision as of 12:14, 23 July 2015
Short description: | p@chr10:17271052..17271064, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17271052..17271064, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.21e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-39 | 42 |
myeloid leukocyte | 3.32e-36 | 72 |
granulocyte monocyte progenitor cell | 1.86e-35 | 67 |
defensive cell | 5.70e-34 | 48 |
phagocyte | 5.70e-34 | 48 |
myeloid lineage restricted progenitor cell | 1.03e-32 | 66 |
monopoietic cell | 2.15e-26 | 59 |
monocyte | 2.15e-26 | 59 |
monoblast | 2.15e-26 | 59 |
promonocyte | 2.15e-26 | 59 |
macrophage dendritic cell progenitor | 2.04e-25 | 61 |
myeloid cell | 7.97e-25 | 108 |
common myeloid progenitor | 7.97e-25 | 108 |
leukocyte | 1.32e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 6.17e-24 | 120 |
hematopoietic oligopotent progenitor cell | 1.07e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-21 | 161 |
hematopoietic stem cell | 1.47e-20 | 168 |
hematopoietic cell | 3.14e-19 | 177 |
nongranular leukocyte | 1.16e-18 | 115 |
natural killer cell | 2.67e-17 | 3 |
pro-NK cell | 2.67e-17 | 3 |
mast cell | 2.36e-11 | 5 |
basophil mast progenitor cell | 2.36e-11 | 5 |
basophil | 9.80e-09 | 3 |
mesenchymal cell | 1.57e-07 | 354 |
connective tissue cell | 2.85e-07 | 361 |
stem cell | 7.57e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.30e-31 | 76 |
bone element | 3.43e-28 | 82 |
skeletal element | 2.71e-25 | 90 |
immune system | 2.46e-24 | 93 |
hematopoietic system | 7.26e-23 | 98 |
blood island | 7.26e-23 | 98 |
skeletal system | 2.56e-22 | 100 |
hemolymphoid system | 2.48e-20 | 108 |
musculoskeletal system | 3.33e-14 | 167 |
lateral plate mesoderm | 3.21e-13 | 203 |
mesoderm | 2.13e-07 | 315 |
mesoderm-derived structure | 2.13e-07 | 315 |
presumptive mesoderm | 2.13e-07 | 315 |
connective tissue | 6.45e-07 | 371 |