FFCP PHASE1:Hg19::chr17:48346424..48346435,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48346424..48346435,+
|short_description=p@chr17:48346424..48346435,+
|description=CAGE_peak_at_chr17:48346424..48346435,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48346424..48346435,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr17:48346424..48346435,+ | |||
|id=chr17:48346424..48346435,+ | |||
|ontology_enrichment_celltype=CL:0000708!5.10e-11!3;CL:0002575!3.79e-08!2;CL:0000055!1.32e-07!180;CL:0000243!1.41e-07!15;CL:0000125!1.41e-07!15;CL:0000030!1.41e-07!15;CL:0000339!1.41e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002575;2.03e-45;2!CL:0000708;4.17e-30;3!CL:0000669;2.62e-23;4!CL:0002262;2.59e-12;2!CL:0002549;2.59e-12;2!CL:1000398;2.59e-12;2!CL:0002590;1.21e-08;3!CL:0000327;8.33e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.04e-45,2;CL:0000708,5.61e-30,3;CL:0000669,2.63e-23,4;CL:0002262,1.85e-12,2;CL:1000398,1.85e-12,2;CL:0002549,2.07e-12,2;CL:0002590,1.21e-08,3;CL:0000327,8.83e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003210!5.10e-11!3;UBERON:0002200!3.15e-07!11;UBERON:0006876!3.15e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;4.17e-30;3!UBERON:0005284;1.62e-18;5!UBERON:0001281;2.59e-12;2!UBERON:0003497;2.59e-12;2!UBERON:0003909;2.59e-12;2!UBERON:0005629;2.59e-12;2!UBERON:0003835;2.59e-12;2!UBERON:0005358;2.59e-12;2!UBERON:0001886;2.59e-12;2!UBERON:0004086;2.59e-12;2!UBERON:0005282;2.59e-12;2!UBERON:0005281;2.59e-12;2!UBERON:0006876;5.86e-09;11!UBERON:0002114;1.21e-08;2!UBERON:0001280;1.21e-08;3!UBERON:0004647;1.21e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,5.61e-30,3;UBERON:0005284,1.35e-18,5;UBERON:0001281,1.85e-12,2;UBERON:0003497,1.85e-12,2;UBERON:0003909,1.85e-12,2;UBERON:0003835,1.85e-12,2;UBERON:0005629,2.07e-12,2;UBERON:0005358,2.07e-12,2;UBERON:0001886,2.07e-12,2;UBERON:0004086,2.07e-12,2;UBERON:0005282,2.07e-12,2;UBERON:0005281,2.07e-12,2;UBERON:0006876,5.41e-09,11;UBERON:0001280,9.66e-09,3;UBERON:0004647,9.66e-09,3;UBERON:0005171,9.66e-09,3;UBERON:0002114,1.40e-08,2 | |||
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| ||
|short_description=p@chr17:48346424..48346435,+ | |||
}} | }} |
Latest revision as of 18:39, 25 July 2015
Short description: | p@chr17:48346424..48346435, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48346424..48346435, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.04e-45 | 2 |
leptomeningeal cell | 5.61e-30 | 3 |
pericyte cell | 2.63e-23 | 4 |
endothelial cell of sinusoid | 1.85e-12 | 2 |
endothelial cell of hepatic sinusoid | 1.85e-12 | 2 |
fibroblast of choroid plexus | 2.07e-12 | 2 |
smooth muscle cell of the brain vasculature | 1.21e-08 | 3 |
extracellular matrix secreting cell | 8.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 5.61e-30 | 3 |
brain vasculature | 1.35e-18 | 5 |
hepatic sinusoid | 1.85e-12 | 2 |
abdomen blood vessel | 1.85e-12 | 2 |
sinusoid | 1.85e-12 | 2 |
abdominal segment blood vessel | 1.85e-12 | 2 |
vascular plexus | 2.07e-12 | 2 |
ventricle of nervous system | 2.07e-12 | 2 |
choroid plexus | 2.07e-12 | 2 |
brain ventricle | 2.07e-12 | 2 |
ventricular system of brain | 2.07e-12 | 2 |
ventricular system of central nervous system | 2.07e-12 | 2 |
vasculature of organ | 5.41e-09 | 11 |
liver parenchyma | 9.66e-09 | 3 |
liver lobule | 9.66e-09 | 3 |
hepatic duct | 9.66e-09 | 3 |
duodenum | 1.40e-08 | 2 |