FFCP PHASE1:Hg19::chr17:4835555..4835578,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:4835555..4835578,+
|short_description=p1@GP1BA
|description=CAGE_peak_1_at_GP1BA_5end
|association_with_transcript=-13bp_to_ENST00000329125,NM_000173,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2811 | |EntrezGene=2811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4439 | |HGNC=4439 | ||
|TSSclassifier=strong | |||
|UniProt=E7ES66 | |UniProt=E7ES66 | ||
|association_with_transcript=-13bp_to_ENST00000329125,NM_000173,uc010vsq.1_5end | |||
|cluster_id=chr17:4835555..4835578,+ | |||
|coexpression_cluster_id=C802 | |||
|description=CAGE_peak_1_at_GP1BA_5end | |||
|id=chr17:4835555..4835578,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.39e-11!112;CL:0000049!4.39e-11!112;CL:0000037!7.14e-11!172;CL:0000566!7.14e-11!172;CL:0000766!4.80e-10!76;CL:0000988!6.58e-10!182;CL:0000094!1.20e-08!8;CL:0000738!1.34e-08!140;CL:0002032!2.85e-08!165;CL:0000837!2.85e-08!165;CL:0000081!2.63e-07!11;CL:0000839!3.15e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.10e-19;8!CL:0000081;1.04e-13;11!CL:0000775;4.97e-11;3!CL:0000226;1.21e-10;3!CL:0000842;1.21e-10;3!CL:0000767;3.16e-10;3!CL:0000764;1.15e-07;2!CL:0000558;1.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.19e-19,8;CL:0000081,1.06e-13,11;CL:0000775,5.06e-11,3;CL:0000226,1.25e-10,3;CL:0000842,1.25e-10,3;CL:0000767,3.21e-10,3;CL:0000764,1.12e-07,2;CL:0000765,1.12e-07,2;CL:0000050,1.12e-07,2;CL:0000038,1.12e-07,2;CL:0000558,1.12e-07,2;CL:0000547,1.12e-07,2;CL:0000549,1.12e-07,2;CL:0000550,1.12e-07,2;CL:0000552,1.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.80e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.76e-17!112;UBERON:0007023!2.16e-16!115;UBERON:0002390!2.20e-15!102;UBERON:0003061!2.20e-15!102;UBERON:0000178!2.30e-15!15;UBERON:0000179!2.30e-15!15;UBERON:0000463!2.30e-15!15;UBERON:0002405!1.43e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.04e-32;15!UBERON:0000179;7.04e-32;15!UBERON:0000463;7.04e-32;15!UBERON:0002390;4.58e-20;32!UBERON:0002193;3.42e-14;42!UBERON:0001829;2.94e-07;2!UBERON:0003127;3.51e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.24e-32,15;UBERON:0000179,7.24e-32,15;UBERON:0000463,7.24e-32,15;UBERON:0007023,4.18e-12,114;UBERON:0002193,1.70e-08,108;UBERON:0002390,1.08e-07,98;UBERON:0003061,1.08e-07,98;UBERON:0001829,3.40e-07,2;UBERON:0003127,3.75e-07,2 | |||
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| ||
|short_description=p1@GP1BA | |||
}} | }} |
Latest revision as of 01:40, 16 September 2015
Short description: | p1@GP1BA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GP1BA_5end |
Coexpression cluster: | C802_acute_Whole_chronic_blood_leukemia_Neutrophils_CD34 |
Association with transcript: | -13bp_to_ENST00000329125, NM_000173, uc010vsq.1_5end |
EntrezGene: | GP1BA |
HGNC: | 4439 |
UniProt: | E7ES66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.19e-19 | 8 |
blood cell | 1.06e-13 | 11 |
neutrophil | 5.06e-11 | 3 |
single nucleate cell | 1.25e-10 | 3 |
mononuclear cell | 1.25e-10 | 3 |
basophil | 3.21e-10 | 3 |
erythroid lineage cell | 1.12e-07 | 2 |
erythroblast | 1.12e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.12e-07 | 2 |
erythroid progenitor cell | 1.12e-07 | 2 |
reticulocyte | 1.12e-07 | 2 |
proerythroblast | 1.12e-07 | 2 |
basophilic erythroblast | 1.12e-07 | 2 |
polychromatophilic erythroblast | 1.12e-07 | 2 |
orthochromatic erythroblast | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 7.24e-32 | 15 |
haemolymphatic fluid | 7.24e-32 | 15 |
organism substance | 7.24e-32 | 15 |
adult organism | 4.18e-12 | 114 |
hemolymphoid system | 1.70e-08 | 108 |
hematopoietic system | 1.08e-07 | 98 |
blood island | 1.08e-07 | 98 |
major salivary gland | 3.40e-07 | 2 |
open tracheal system trachea | 3.75e-07 | 2 |