FFCP PHASE1:Hg19::chr19:18718172..18718197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18718172..18718197,+ | |||
|coexpression_cluster_id=C731 | |||
|description=CAGE_peak_at_chr19:18718172..18718197,+ | |description=CAGE_peak_at_chr19:18718172..18718197,+ | ||
|id=chr19:18718172..18718197,+ | |id=chr19:18718172..18718197,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.71e-17!9;CL:0000447!1.71e-17!9;CL:0000327!1.20e-10!14;CL:0000667!1.27e-10!6;CL:0000058!1.27e-10!6;CL:0000138!1.27e-10!6;CL:0002334!5.18e-10!12;CL:0002615!4.29e-09!3;CL:0002580!7.52e-09!3;CL:0000214!9.44e-09!3;CL:0002579!1.56e-08!3;CL:0000136!5.24e-08!15;CL:0000499!1.85e-07!27 | |ontology_enrichment_celltype=CL:0000153!1.71e-17!9;CL:0000447!1.71e-17!9;CL:0000327!1.20e-10!14;CL:0000667!1.27e-10!6;CL:0000058!1.27e-10!6;CL:0000138!1.27e-10!6;CL:0002334!5.18e-10!12;CL:0002615!4.29e-09!3;CL:0002580!7.52e-09!3;CL:0000214!9.44e-09!3;CL:0002579!1.56e-08!3;CL:0000136!5.24e-08!15;CL:0000499!1.85e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.32e-39;13!CL:0002615;5.67e-33;3!CL:0002580;5.64e-32;3!CL:0000214;1.06e-31;3!CL:0000153;1.35e-28;9!CL:0000447;1.35e-28;9!CL:0002617;1.27e-22;2!CL:0002334;9.23e-22;12!CL:0000327;3.61e-17;15!CL:0002581;5.33e-12;1!CL:0002616;9.61e-12;1!CL:0000499;3.65e-09;28!CL:0000138;8.56e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.22e-34,15;CL:0002615,5.37e-33,3;CL:0002580,5.65e-32,3;CL:0000214,1.46e-31,3;CL:0000153,1.85e-28,9;CL:0000447,1.85e-28,9;CL:0002617,1.34e-22,2;CL:0002334,8.28e-22,12;CL:0000327,4.36e-17,15;CL:0002581,5.05e-12,1;CL:0002616,8.64e-12,1;CL:0000499,4.02e-09,28;CL:0000058,9.33e-08,6;CL:0000138,9.33e-08,6;CL:0000134,4.02e-07,354;CL:0000151,4.57e-07,36;CL:0002320,6.23e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.07e-16!12;UBERON:0000042!1.07e-16!12;UBERON:0003688!6.25e-16!6;UBERON:0002358!6.25e-16!6;UBERON:0003684!6.25e-16!6;UBERON:0001178!6.25e-16!6;UBERON:0006915!9.44e-09!3;UBERON:0002018!9.44e-09!3;UBERON:0002217!9.44e-09!3;UBERON:0007616!9.44e-09!3;UBERON:0009569!8.05e-07!113 | |ontology_enrichment_uberon=UBERON:0004457!1.07e-16!12;UBERON:0000042!1.07e-16!12;UBERON:0003688!6.25e-16!6;UBERON:0002358!6.25e-16!6;UBERON:0003684!6.25e-16!6;UBERON:0001178!6.25e-16!6;UBERON:0006915!9.44e-09!3;UBERON:0002018!9.44e-09!3;UBERON:0002217!9.44e-09!3;UBERON:0007616!9.44e-09!3;UBERON:0009569!8.05e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.50e-56;9!UBERON:0000042;1.50e-56;9!UBERON:0006915;1.06e-31;3!UBERON:0007616;1.06e-31;3!UBERON:0002217;1.06e-31;3!UBERON:0002018;1.06e-31;3!UBERON:0003688;9.65e-29;6!UBERON:0002358;9.65e-29;6!UBERON:0003684;9.65e-29;6!UBERON:0001178;9.65e-29;6!UBERON:0000310;2.00e-26;10!UBERON:0001443;5.01e-24;11!UBERON:0005406;5.70e-22;2!UBERON:0004905;2.67e-12;8!UBERON:0000982;2.67e-12;8!UBERON:0004770;2.67e-12;8!UBERON:0001013;3.02e-12;14!UBERON:0000486;2.23e-08;12!UBERON:0004458;9.49e-08;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,2.72e-42,12;UBERON:0000042,2.72e-42,12;UBERON:0006915,1.46e-31,3;UBERON:0007616,1.46e-31,3;UBERON:0002217,1.46e-31,3;UBERON:0002018,1.46e-31,3;UBERON:0003688,8.08e-29,6;UBERON:0002358,8.08e-29,6;UBERON:0003684,8.08e-29,6;UBERON:0001178,8.08e-29,6;UBERON:0000310,2.05e-26,10;UBERON:0001443,5.13e-24,11;UBERON:0005406,4.86e-22,2;UBERON:0001013,2.77e-12,14;UBERON:0004905,3.00e-12,8;UBERON:0000982,3.00e-12,8;UBERON:0004770,3.00e-12,8;UBERON:0004458,6.70e-10,49;UBERON:0004923,3.60e-07,66 | |||
|phase1_expression=24.163224442984,6.63711624062048,14.518303621885,11.0080628188443,6.70441641640932,2.61701557230111,0,0,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.01392563272577,2.3858578411533,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96972492510043,4.45039722535381,2.52594084989766,2.81906128362542,0.511707249066704,0.804269605718038,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06658324714394,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.544692317594951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.43727929598746,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,2.36657343289777,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.445530107947154,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=24.163224442984,6.63711624062048,14.518303621885,11.0080628188443,6.70441641640932,2.61701557230111,0,0,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.01392563272577,2.3858578411533,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96972492510043,4.45039722535381,2.52594084989766,2.81906128362542,0.511707249066704,0.804269605718038,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06658324714394,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.544692317594951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.43727929598746,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,2.36657343289777,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.445530107947154,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18718172..18718197,+ | |short_description=p@chr19:18718172..18718197,+ | ||
}} | }} |
Latest revision as of 05:16, 26 July 2015
Short description: | p@chr19:18718172..18718197, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18718172..18718197, + |
Coexpression cluster: | C731_Adipocyte_Preadipocyte_adipose_Wilms_salivary_Mesenchymal_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.22e-34 | 15 |
adipocyte of omentum tissue | 5.37e-33 | 3 |
preadipocyte of the breast | 5.65e-32 | 3 |
synovial cell | 1.46e-31 | 3 |
GAG secreting cell | 1.85e-28 | 9 |
carbohydrate secreting cell | 1.85e-28 | 9 |
adipocyte of breast | 1.34e-22 | 2 |
preadipocyte | 8.28e-22 | 12 |
extracellular matrix secreting cell | 4.36e-17 | 15 |
perirenal preadipocyte | 5.05e-12 | 1 |
perirenal adipocyte cell | 8.64e-12 | 1 |
stromal cell | 4.02e-09 | 28 |
chondroblast | 9.33e-08 | 6 |
chondrocyte | 9.33e-08 | 6 |
mesenchymal cell | 4.02e-07 | 354 |
secretory cell | 4.57e-07 | 36 |
connective tissue cell | 6.23e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 2.72e-42 | 12 |
serous membrane | 2.72e-42 | 12 |
stratified squamous epithelium | 1.46e-31 | 3 |
layer of synovial tissue | 1.46e-31 | 3 |
synovial joint | 1.46e-31 | 3 |
synovial membrane of synovial joint | 1.46e-31 | 3 |
omentum | 8.08e-29 | 6 |
peritoneum | 8.08e-29 | 6 |
abdominal cavity | 8.08e-29 | 6 |
visceral peritoneum | 8.08e-29 | 6 |
breast | 2.05e-26 | 10 |
chest | 5.13e-24 | 11 |
perirenal fat | 4.86e-22 | 2 |
adipose tissue | 2.77e-12 | 14 |
articulation | 3.00e-12 | 8 |
skeletal joint | 3.00e-12 | 8 |
articular system | 3.00e-12 | 8 |
body cavity or lining | 6.70e-10 | 49 |
organ component layer | 3.60e-07 | 66 |