FFCP PHASE1:Hg19::chr17:60705021..60705044,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:60705021..60705044,+
|short_description=p1@MRC2
|description=CAGE_peak_1_at_MRC2_5end
|association_with_transcript=259bp_to_ENST00000303375,NM_006039,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9902 | |EntrezGene=9902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16875 | |HGNC=16875 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBG0 | |UniProt=Q9UBG0 | ||
|association_with_transcript=259bp_to_ENST00000303375,NM_006039,uc002jac.2,uc002jad.2_5end | |||
|cluster_id=chr17:60705021..60705044,+ | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_1_at_MRC2_5end | |||
|id=chr17:60705021..60705044,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.63e-43!180;CL:0000057!1.11e-21!75;CL:0000183!1.97e-17!59;CL:0000680!9.12e-17!57;CL:0000056!9.12e-17!57;CL:0000355!9.12e-17!57;CL:0000187!7.91e-16!54;CL:0000393!1.12e-14!60;CL:0000211!1.12e-14!60;CL:0000222!3.98e-13!119;CL:0000192!4.39e-13!42;CL:0000514!4.39e-13!42;CL:0000359!1.59e-10!32;CL:0002620!3.33e-08!23;CL:0000220!3.40e-07!246;CL:0002371!3.88e-07!591;CL:0002321!5.80e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.91e-10;32!CL:0000192;4.92e-10;43!CL:0000187;4.71e-09;55!CL:0000057;6.63e-09;73!CL:0002320;2.02e-08;188!CL:0002620;3.04e-08;23!CL:0000393;5.85e-08;61!CL:0000211;5.85e-08;61!CL:0000134;1.03e-07;55!CL:0000048;1.07e-07;58!CL:0000723;1.21e-07;61!CL:0000499;7.67e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.86e-22,76;CL:0000680,2.76e-17,58;CL:0000056,2.76e-17,58;CL:0000355,2.76e-17,58;CL:0000187,2.43e-16,55;CL:0000393,3.63e-15,61;CL:0000211,3.63e-15,61;CL:0000192,1.39e-13,43;CL:0000514,1.39e-13,43;CL:0000222,2.15e-13,121;CL:0000359,1.48e-10,32;CL:0002620,3.15e-08,23;CL:0002321,2.01e-07,250;CL:0000499,7.63e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;4.92e-10;43!CL:0000355;4.49e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.31e-19!83;UBERON:0002329!2.31e-19!83;UBERON:0003077!2.31e-19!83;UBERON:0003059!2.31e-19!83;UBERON:0007282!2.31e-19!83;UBERON:0009618!2.31e-19!83;UBERON:0007285!2.31e-19!83;UBERON:0004290!5.68e-18!70;UBERON:0000486!1.89e-17!82;UBERON:0001134!6.34e-17!61;UBERON:0002036!6.34e-17!61;UBERON:0003082!6.34e-17!61;UBERON:0002385!1.45e-16!63;UBERON:0001015!1.45e-16!63;UBERON:0000383!1.45e-16!63;UBERON:0005256!7.65e-15!143;UBERON:0000475!8.88e-12!365;UBERON:0004872!3.29e-11!84;UBERON:0002100!9.15e-11!216;UBERON:0002049!1.32e-10!79;UBERON:0007798!1.32e-10!79;UBERON:0001637!1.55e-10!42;UBERON:0003509!1.55e-10!42;UBERON:0004572!1.55e-10!42;UBERON:0004573!8.04e-10!33;UBERON:0004571!8.04e-10!33;UBERON:0001981!1.35e-09!60;UBERON:0007500!1.35e-09!60;UBERON:0004537!1.35e-09!60;UBERON:0006965!1.35e-09!60;UBERON:0003914!2.79e-09!118;UBERON:0000468!3.11e-09!659;UBERON:0000481!3.75e-09!347;UBERON:0003104!1.09e-08!238;UBERON:0009142!1.09e-08!238;UBERON:0000055!5.03e-08!69;UBERON:0004535!5.87e-08!110;UBERON:0001009!9.62e-08!113;UBERON:0003102!1.60e-07!95;UBERON:0000490!3.28e-07!138;UBERON:0000948!3.54e-07!24;UBERON:0005498!3.54e-07!24;UBERON:0004140!3.54e-07!24;UBERON:0009881!3.54e-07!24;UBERON:0004141!3.54e-07!24;UBERON:0003084!3.54e-07!24;UBERON:0007005!3.54e-07!24;UBERON:0004139!3.54e-07!24;UBERON:0004291!3.54e-07!24;UBERON:0000119!5.05e-07!312;UBERON:0002199!6.93e-07!45;UBERON:0002416!6.93e-07!45;UBERON:0000483!8.56e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.76e-09;33!UBERON:0004571;4.76e-09;33!UBERON:0002384;2.47e-08;198!UBERON:0002204;6.51e-08;70!UBERON:0001637;7.42e-08;42!UBERON:0003509;7.42e-08;42!UBERON:0004572;7.42e-08;42!UBERON:0002385;1.12e-07;31!UBERON:0001015;1.12e-07;31!UBERON:0000383;1.12e-07;31!UBERON:0001434;6.54e-07;36 | |||
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| ||
|short_description=p1@MRC2 | |||
}} | }} |
Latest revision as of 16:10, 16 September 2015
Short description: | p1@MRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRC2_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 259bp_to_ENST00000303375, NM_006039, uc002jac.2, uc002jad.2_5end |
EntrezGene: | MRC2 |
HGNC: | 16875 |
UniProt: | Q9UBG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.86e-22 | 76 |
muscle precursor cell | 2.76e-17 | 58 |
myoblast | 2.76e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.76e-17 | 58 |
muscle cell | 2.43e-16 | 55 |
electrically responsive cell | 3.63e-15 | 61 |
electrically active cell | 3.63e-15 | 61 |
smooth muscle cell | 1.39e-13 | 43 |
smooth muscle myoblast | 1.39e-13 | 43 |
mesodermal cell | 2.15e-13 | 121 |
vascular associated smooth muscle cell | 1.48e-10 | 32 |
skin fibroblast | 3.15e-08 | 23 |
embryonic cell | 2.01e-07 | 250 |
stromal cell | 7.63e-07 | 28 |