FFCP PHASE1:Hg19::chr2:220491902..220491915,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6508 | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11029 | |HGNC=11029 | ||
|TSSclassifier=strong | |||
|UniProt=P48751 | |UniProt=P48751 | ||
|association_with_transcript=-133bp_to_ENST00000358055_5end | |association_with_transcript=-133bp_to_ENST00000358055_5end | ||
|cluster_id=chr2:220491902..220491915,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_11_at_SLC4A3_5end | |description=CAGE_peak_11_at_SLC4A3_5end | ||
|id=chr2:220491902..220491915,+ | |id=chr2:220491902..220491915,+ | ||
|ontology_enrichment_celltype=CL:0002605!3.37e-07!3 | |ontology_enrichment_celltype=CL:0002605!3.37e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.81e-63;4!UBERON:0007284;1.81e-63;4!UBERON:0004140;7.48e-30;1!UBERON:0010226;2.37e-29;1!UBERON:0003104;1.00e-08;31!UBERON:0006603;1.41e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.58e-57;2!DOID:178;2.37e-29;1!DOID:326;2.37e-29;1!DOID:3978;2.37e-29;1!DOID:3394;2.37e-29;1!DOID:5844;2.37e-29;1!DOID:1287;3.16e-29;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.58e-57,2;DOID:178,2.37e-29,1;DOID:326,2.37e-29,1;DOID:3978,2.37e-29,1;DOID:3394,2.37e-29,1;DOID:5844,2.37e-29,1;DOID:1287,3.16e-29,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003978;3.02e-84;3!UBERON:0000946;3.02e-84;3!UBERON:0002133;8.46e-57;2!UBERON:0007100;3.42e-55;25!UBERON:0004151;2.64e-38;3!UBERON:0000948;2.63e-32;22!UBERON:0002084;2.37e-29;1!UBERON:0002135;2.37e-29;1!UBERON:0002146;2.37e-29;1!UBERON:0002134;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0005208;2.37e-29;1!UBERON:0005623;2.37e-29;1!UBERON:0004145;2.37e-29;1!UBERON:0005946;2.37e-29;1!UBERON:0005965;2.37e-29;1!UBERON:0002078;2.37e-29;1!UBERON:0010313;5.53e-26;10!UBERON:0002081;2.05e-15;2!UBERON:0003103;1.04e-11;61!UBERON:0001009;9.29e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.71e-84,3;UBERON:0009751,1.71e-84,3;UBERON:0000946,1.71e-84,3;UBERON:0002523,1.71e-84,3;UBERON:0005983,1.71e-84,3;UBERON:0002165,1.71e-84,3;UBERON:0002062,1.71e-84,3;UBERON:0007280,1.71e-84,3;UBERON:0002133,6.36e-57,2;UBERON:0007100,3.82e-51,27;UBERON:0004151,4.67e-38,3;UBERON:0004797,8.05e-37,7;UBERON:0000948,1.16e-29,24;UBERON:0005498,1.16e-29,24;UBERON:0004140,1.16e-29,24;UBERON:0009881,1.16e-29,24;UBERON:0004141,1.16e-29,24;UBERON:0003084,1.16e-29,24;UBERON:0007005,1.16e-29,24;UBERON:0004139,1.16e-29,24;UBERON:0004291,1.16e-29,24;UBERON:0002135,1.33e-29,1;UBERON:0002146,1.78e-29,1;UBERON:0005623,1.78e-29,1;UBERON:0002134,3.16e-29,1;UBERON:0005208,3.16e-29,1;UBERON:0005946,3.16e-29,1;UBERON:0005965,3.16e-29,1;UBERON:0002078,3.16e-29,1;UBERON:0002084,4.20e-29,1;UBERON:0002082,4.20e-29,1;UBERON:0010226,4.20e-29,1;UBERON:0010313,4.66e-26,10;UBERON:0002342,4.66e-26,10;UBERON:0005062,4.66e-26,10;UBERON:0003103,1.45e-20,68;UBERON:0002081,2.37e-15,2;UBERON:0010227,2.37e-15,2;UBERON:0001009,1.36e-12,112;UBERON:0004145,1.09e-10,3;UBERON:0007023,3.77e-09,114;UBERON:0004872,7.51e-09,83;UBERON:0004535,8.55e-07,109 | |||
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|short_description=p11@SLC4A3 | |short_description=p11@SLC4A3 | ||
}} | }} |
Latest revision as of 22:11, 24 September 2015
Short description: | p11@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC4A3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -133bp_to_ENST00000358055_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | P48751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.58e-57 | 2 |
vascular disease | 2.37e-29 | 1 |
ischemia | 2.37e-29 | 1 |
extrinsic cardiomyopathy | 2.37e-29 | 1 |
myocardial ischemia | 2.37e-29 | 1 |
myocardial infarction | 2.37e-29 | 1 |
cardiovascular system disease | 3.16e-29 | 4 |