FFCP PHASE1:Hg19::chr17:74582141..74582157,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:74582141..74582157,-
|short_description=p4@ST6GALNAC2
|description=CAGE_peak_4_at_ST6GALNAC2_5end
|association_with_transcript=0bp_to_ENST00000225276,NM_0...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10610 | |EntrezGene=10610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10867 | |HGNC=10867 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJ37 | |UniProt=Q9UJ37 | ||
|association_with_transcript=0bp_to_ENST00000225276,NM_006456,uc002jsg.3_5end | |||
|cluster_id=chr17:74582141..74582157,- | |||
|coexpression_cluster_id=C3682 | |||
|description=CAGE_peak_4_at_ST6GALNAC2_5end | |||
|id=chr17:74582141..74582157,- | |||
|ontology_enrichment_celltype=CL:0002077!4.03e-07!33;CL:0000223!8.20e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002077;8.51e-15;34!CL:0002159;5.30e-11;14!CL:0000148;1.30e-10;10!CL:0000244;1.24e-09;4!CL:0000731;1.24e-09;4!CL:0000147;3.12e-09;14!CL:0000775;4.25e-08;3!CL:0002567;6.43e-08;3!CL:0000710;1.18e-07;20!CL:0002076;3.25e-07;42!CL:0002368;4.20e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002077,1.41e-16,34;CL:0000148,5.78e-11,10;CL:0000541,5.78e-11,10;CL:0002159,1.01e-10,14;CL:0000244,6.13e-10,4;CL:0000731,6.13e-10,4;CL:0002076,2.15e-09,42;CL:0000147,2.28e-09,14;CL:0000775,3.27e-08,3;CL:0002567,4.12e-08,3;CL:0000710,8.00e-08,20;CL:0000066,8.09e-08,253;CL:0002368,1.96e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.11e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.36e-08,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,1.31883489114227,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0.383829398097213,0.619264493264304,0.919421224478927,0.6024118375565,2.9580320813343,0,0,0,0.553995408531877,0.401088894940283,0.868043482863407,2.23915474239924,0.971680998056939,0,0.290796477559129,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0.564727018627814,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.44931452458598,0.450530678524519,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0.589405839739707,4.73583874780305,1.11235332835329,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.673588117878509,0.337834441449967,0,0,0,1.31780417436063,0,4.79703457356788,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.184099797284599,0,0,0,0,1.15956511897978,1.36373060295417,0.860413786167011,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,1.42675371031213,2.24803506515239,1.00528972411631,4.25906847729236,0,0,0,0.463721619900307,0,0,0,0.190254152234598,0,0,0.738651018262192,0.468008530278475,0.148631162288728,1.87467667973554,1.17587489739202,1.13420077793909,1.52249488594842,0.290633938513962,0.383382679165211,0,0,1.86595303986695,3.17063897517315,2.27236380167484,3.04789892602411,5.72982638337417,8.20522130470329,1.71072446022705,1.54241239054985,1.8020583470635,6.85983438313388,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0.479249710983165,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,2.99161459204025,3.72973962092432,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0,0,0,0.533637789017222,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,1.20303882181971,1.38121483403844,0.114814448164607,0,0.131124414959424,0.902399225814824,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,1.02580050046556,0,0.650756789328606,0.721287081534056,0,0.165018999841176,0,3.25030123018261,0,0,0,0.15350367472613,0,0,0,0,0,2.31398881505369,1.72971060628596,1.78657797492418,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,1.73199802905922,1.34060455107157,0,0,2.58303223602738,1.68471475667626,3.99087138183008,2.98640420269047,2.02979043692868,0.764637207142375,1.70894156152249,2.1440859791201,0.822724546172388,0.648473311192717,0.540031437238115,2.37937552888281,0.213648142254946,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.500547425135725,0,0,0,0,0.33307196799782,0,0.37428108081644,0.73254089635947,0,0,0,1.19372242368845,1.18785872333055,0.921482106297696,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.7812832832557,2.79871999987826,0,1.593108275997,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0.697118721393016,0.692552326534174,0.113942055847001,0.23056390438806,0.897576444097721,0.325942115766024,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0.216388639742091,0,0.619202951523374,0.611030144933625,0,0,0,1.28062152663286,0,0.702793337176017,0,0.586993856796269,0.971121518136371,0,0,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0.694238953340524,1.37189356380129,0.261177619741208,1.04836000945218,0.171986032471617,0,0,0.0821154570532092,0.872901148395775,0.176512253383001,4.06765333404958,0,0,0.0633107959558787,0.391102765469606,1.04206466326994,0,0.19980960958213,0,0.229073192331831,0,0,0,0.471388069233591,0,0.209205692624666,0.509991088181609,0,0.600420288709789,0.136905378891993,0,0,0,0.837847203816763,0.916641696046735,0,1.19807400299395,0.429226048136571,1.56220020209311,0.134366944973453,0,0,0.157566364614447,0,0,0.393709926058995,0,0.795229689809303,1.0896272488926,0,0,0.415440338029185,0,0,0.0607495566580247,2.68347750079413,0.788057072991982,0.681909645754975,0,0.179287339332845,0.575745591958336,2.1440859791201,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0,2.60617810496289,0.146552233678082,0,0.517131825446202,0.52893040697076,0,0,1.17466153824464,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,2.1760712134779,1.2534494701135,1.22538230705385,2.29510841496863,0.157054096250234,0,0.244052529803926,0.1251909307065,1.72022758707021,1.22021956690538,0.620964029413834,0.276697269872462,0.499921631848426,4.85277176133273,0.856396000634902,1.17632909849086,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0.512483037175893,0.345430341731199,0,0,0.194860308839388,0.265729680626726,0.654261577023377,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0.979156554036111,2.48830904013189,0,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.345786262321089,0.161475645631851,0,0.687034029507179,0,1.28400018965175,0.231051332300676,0,1.3807198521202,0,0.300841313397029,0.20170506870352,0,0,0.163771917510097,0.443568258651136,0.202612753855184,0,0,0.253663240775627,0.546974809018219,1.09651553371436,0.992422356778588,0,1.66091155931474,1.07140367175657,0,0,0,1.1531308121143,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0.354581522651905,0.111231401892069,0.706437835654626,0.157115589916002,0,0.913158720509496,0,0,7.50503713854892,0.158013611732727,0.116241425368125,0,0,0,0.85359238546975,4.14755797088455,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0.196300467230486,0.121917924982269,0.647428837187895,2.25858175083743,1.1598144313382,1.45713297917742,0.935757853848423,0.397901550322736,0,0.11294608203896,0.219881033490858,0.150962843566674,0.231522474323834,0,0,0.245148321753905,0,0.588925401344836,0,1.6906229103336,0,0.0939839179798536,0.902410431630081,0,1.2498775702396,0,0,0.730336388246517,0,0.573358332605805,0,0.339957450954573,0,0,0,0,0,0,0,1.90047751517155,0.101988829741982,0.26721740526556,0,0.250707539292375,0.303114792872958,0,0.829169439458779,0.20686599172379,0.639701945702943,0.23806443146374,0,0.31037357147929,0,0.509177266225319,1.0105859447911,1.08858373948481,0.342233301085281,0.471464371102113,0.717222053926764,0,0.569822880276821,0.106727345877715,1.9307228228694,0,0,0.244482888365733,2.03448089157869,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,1.31883489114227,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0.383829398097213,0.619264493264304,0.919421224478927,0.6024118375565,2.9580320813343,0,0,0,0.553995408531877,0.401088894940283,0.868043482863407,2.23915474239924,0.971680998056939,0,0.290796477559129,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0.564727018627814,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.44931452458598,0.450530678524519,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0.589405839739707,4.73583874780305,1.11235332835329,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.673588117878509,0.337834441449967,0,0,0,1.31780417436063,0,4.79703457356788,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.184099797284599,0,0,0,0,1.15956511897978,1.36373060295417,0.860413786167011,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,1.42675371031213,2.24803506515239,1.00528972411631,4.25906847729236,0,0,0,0.463721619900307,0,0,0,0.190254152234598,0,0,0.738651018262192,0.468008530278475,0.148631162288728,1.87467667973554,1.17587489739202,1.13420077793909,1.52249488594842,0.290633938513962,0.383382679165211,0,0,1.86595303986695,3.17063897517315,2.27236380167484,3.04789892602411,5.72982638337417,8.20522130470329,1.71072446022705,1.54241239054985,1.8020583470635,6.85983438313388,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0.479249710983165,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,2.99161459204025,3.72973962092432,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0,0,0,0.533637789017222,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,1.20303882181971,1.38121483403844,0.114814448164607,0,0.131124414959424,0.902399225814824,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,1.02580050046556,0,0.650756789328606,0.721287081534056,0,0.165018999841176,0,3.25030123018261,0,0,0,0.15350367472613,0,0,0,0,0,2.31398881505369,1.72971060628596,1.78657797492418,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,1.73199802905922,1.34060455107157,0,0,2.58303223602738,1.68471475667626,3.99087138183008,2.98640420269047,2.02979043692868,0.764637207142375,1.70894156152249,2.1440859791201,0.822724546172388,0.648473311192717,0.540031437238115,2.37937552888281,0.213648142254946,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.500547425135725,0,0,0,0,0.33307196799782,0,0.37428108081644,0.73254089635947,0,0,0,1.19372242368845,1.18785872333055,0.921482106297696,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.7812832832557,2.79871999987826,0,1.593108275997,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0.697118721393016,0.692552326534174,0.113942055847001,0.23056390438806,0.897576444097721,0.325942115766024,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0.216388639742091,0,0.619202951523374,0.611030144933625,0,0,0,1.28062152663286,0,0.702793337176017,0,0.586993856796269,0.971121518136371,0,0,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0.694238953340524,1.37189356380129,0.261177619741208,1.04836000945218,0.171986032471617,0,0,0.0821154570532092,0.872901148395775,0.176512253383001,4.06765333404958,0,0,0.0633107959558787,0.391102765469606,1.04206466326994,0,0.19980960958213,0,0.229073192331831,0,0,0,0.471388069233591,0,0.209205692624666,0.509991088181609,0,0.600420288709789,0.136905378891993,0,0,0,0.837847203816763,0.916641696046735,0,1.19807400299395,0.429226048136571,1.56220020209311,0.134366944973453,0,0,0.157566364614447,0,0,0.393709926058995,0,0.795229689809303,1.0896272488926,0,0,0.415440338029185,0,0,0.0607495566580247,2.68347750079413,0.788057072991982,0.681909645754975,0,0.179287339332845,0.575745591958336,2.1440859791201,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0,2.60617810496289,0.146552233678082,0,0.517131825446202,0.52893040697076,0,0,1.17466153824464,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,2.1760712134779,1.2534494701135,1.22538230705385,2.29510841496863,0.157054096250234,0,0.244052529803926,0.1251909307065,1.72022758707021,1.22021956690538,0.620964029413834,0.276697269872462,0.499921631848426,4.85277176133273,0.856396000634902,1.17632909849086,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0.512483037175893,0.345430341731199,0,0,0.194860308839388,0.265729680626726,0.654261577023377,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0.979156554036111,2.48830904013189,0,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.345786262321089,0.161475645631851,0,0.687034029507179,0,1.28400018965175,0.231051332300676,0,1.3807198521202,0,0.300841313397029,0.20170506870352,0,0,0.163771917510097,0.443568258651136,0.202612753855184,0,0,0.253663240775627,0.546974809018219,1.09651553371436,0.992422356778588,0,1.66091155931474,1.07140367175657,0,0,0,1.1531308121143,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0.354581522651905,0.111231401892069,0.706437835654626,0.157115589916002,0,0.913158720509496,0,0,7.50503713854892,0.158013611732727,0.116241425368125,0,0,0,0.85359238546975,4.14755797088455,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0.196300467230486,0.121917924982269,0.647428837187895,2.25858175083743,1.1598144313382,1.45713297917742,0.935757853848423,0.397901550322736,0,0.11294608203896,0.219881033490858,0.150962843566674,0.231522474323834,0,0,0.245148321753905,0,0.588925401344836,0,1.6906229103336,0,0.0939839179798536,0.902410431630081,0,1.2498775702396,0,0,0.730336388246517,0,0.573358332605805,0,0.339957450954573,0,0,0,0,0,0,0,1.90047751517155,0.101988829741982,0.26721740526556,0,0.250707539292375,0.303114792872958,0,0.829169439458779,0.20686599172379,0.639701945702943,0.23806443146374,0,0.31037357147929,0,0.509177266225319,1.0105859447911,1.08858373948481,0.342233301085281,0.471464371102113,0.717222053926764,0,0.569822880276821,0.106727345877715,1.9307228228694,0,0,0.244482888365733,2.03448089157869,0,0.402547587182052,0 | ||
|short_description=p4@ST6GALNAC2 | |||
}} | }} |
Latest revision as of 16:05, 17 September 2015
Short description: | p4@ST6GALNAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ST6GALNAC2_5end |
Coexpression cluster: | C3682_retina_Melanocyte_breast_melanoma_Corneal_Urothelial_Keratinocyte |
Association with transcript: | 0bp_to_ENST00000225276, NM_006456, uc002jsg.3_5end |
EntrezGene: | ST6GALNAC2 |
HGNC: | 10867 |
UniProt: | Q9UJ37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelial cell | 1.41e-16 | 34 |
melanocyte | 5.78e-11 | 10 |
melanoblast | 5.78e-11 | 10 |
general ecto-epithelial cell | 1.01e-10 | 14 |
transitional epithelial cell | 6.13e-10 | 4 |
urothelial cell | 6.13e-10 | 4 |
endo-epithelial cell | 2.15e-09 | 42 |
pigment cell | 2.28e-09 | 14 |
neutrophil | 3.27e-08 | 3 |
light melanocyte | 4.12e-08 | 3 |
neurecto-epithelial cell | 8.00e-08 | 20 |
epithelial cell | 8.09e-08 | 253 |
respiratory epithelial cell | 1.96e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.36e-08 | 5 |