Coexpression cluster:C412: Difference between revisions
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{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09613232153983,0.828223684145325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|full_id=C412_serous_breast_papillotubular_ductus_seminal_kidney_clear|gostat_on_coexpression_clusters=GO:0033087!negative regulation of immature T cell proliferation!0.00747674555516307!2064$GO:0033080!immature T cell proliferation in the thymus!0.00747674555516307!2064$GO:0033079!immature T cell proliferation!0.00747674555516307!2064$GO:0033083!regulation of immature T cell proliferation!0.00747674555516307!2064$GO:0033088!negative regulation of immature T cell proliferation in the thymus!0.00747674555516307!2064$GO:0033084!regulation of immature T cell proliferation in the thymus!0.00747674555516307!2064$GO:0005006!epidermal growth factor receptor activity!0.0168202015612282!2064$GO:0005721!centric heterochromatin!0.0168202015612282!3619$GO:0043125!ErbB-3 class receptor binding!0.0199335866525098!2064$GO:0008045!motor axon guidance!0.0224236346827391!2064$GO:0033077!T cell differentiation in the thymus!0.0313723029195121!2064$GO:0007528!neuromuscular junction development!0.0313723029195121!2064$GO:0016101!diterpenoid metabolic process!0.0313723029195121!5919$GO:0017127!cholesterol transporter activity!0.0313723029195121!10948$GO:0001523!retinoid metabolic process!0.0313723029195121!5919$GO:0006700!C21-steroid hormone biosynthetic process!0.0313723029195121!10948$GO:0004716!receptor signaling protein tyrosine kinase activity!0.0313723029195121!2064$GO:0015248!sterol transporter activity!0.0313723029195121!10948$GO:0030879!mammary gland development!0.0313723029195121!2064$GO:0006721!terpenoid metabolic process!0.0313723029195121!5919$GO:0008207!C21-steroid hormone metabolic process!0.0346241181710792!10948$GO:0015485!cholesterol binding!0.0346241181710792!10948$GO:0050679!positive regulation of epithelial cell proliferation!0.035064301385311!2064$GO:0000792!heterochromatin!0.0373314928407595!3619$GO:0008289!lipid binding!0.0413396373469942!10948$GO:0007422!peripheral nervous system development!0.0413396373469942!2064$GO:0042552!myelination!0.0417436404705552!2064$GO:0032934!sterol binding!0.0417436404705552!10948$GO:0031902!late endosome membrane!0.0417436404705552!10948$GO:0050678!regulation of epithelial cell proliferation!0.0417436404705552!2064$GO:0007272!ensheathment of neurons!0.0417436404705552!2064$GO:0008366!axon ensheathment!0.0417436404705552!2064$GO:0050673!epithelial cell proliferation!0.0417436404705552!2064$GO:0042129!regulation of T cell proliferation!0.0417436404705552!2064$GO:0000910!cytokinesis!0.0417436404705552!3619$GO:0045765!regulation of angiogenesis!0.0417436404705552!2064$GO:0042098!T cell proliferation!0.0417436404705552!2064$GO:0050808!synapse organization and biogenesis!0.0417436404705552!2064$GO:0001508!regulation of action potential!0.0417436404705552!2064$GO:0044255!cellular lipid metabolic process!0.0417436404705552!5919;10948$GO:0030217!T cell differentiation!0.0417436404705552!2064$GO:0048741!skeletal muscle fiber development!0.0417436404705552!2064$GO:0050670!regulation of lymphocyte proliferation!0.0417436404705552!2064$GO:0032944!regulation of mononuclear cell proliferation!0.0417436404705552!2064$GO:0048747!muscle fiber development!0.0417436404705552!2064$GO:0042446!hormone biosynthetic process!0.0418053836348106!10948$GO:0006720!isoprenoid metabolic process!0.0428126721177308!5919$GO:0048732!gland development!0.0428491605705884!2064$GO:0006839!mitochondrial transport!0.043793229394858!10948$GO:0005770!late endosome!0.0446891448334533!10948$GO:0032943!mononuclear cell proliferation!0.0446891448334533!2064$GO:0019748!secondary metabolic process!0.0446891448334533!5919$GO:0046651!lymphocyte proliferation!0.0446891448334533!2064$GO:0007411!axon guidance!0.0463340700446233!2064$GO:0007059!chromosome segregation!0.0470624258525105!3619$GO:0050863!regulation of T cell activation!0.0470624258525105!2064$GO:0006629!lipid metabolic process!0.0480588986131011!5919;10948$GO:0030098!lymphocyte differentiation!0.0492722668622572!2064$GO:0043406!positive regulation of MAP kinase activity!0.0497624591336918!2064$GO:0007519!skeletal muscle 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894421,0.962266,0.641475,0.607287,0.878949,0.639657,0.835924,0.527042,0.520364,0.764606,0.908995,0.441869,0.624512,0.559017,0.842348,0.359055,0.307382,0.205617,0.527024,0.82558,0.465214,0.422413,0.928436,0.459206,0.738258,0.588303,0.349767,0.80062,0.759718,0.330022,0.697707,0.853655,0.5137|tfbs_overrepresentation_for_novel_motifs=0.256579,0.21594,0.247245,0.880383,0.435938,0.446495,0.193858,0.970994,1.32584,0.00800657,0.127781,0.635883,0.00986189,0.18622,0.195296,0.484254,0.359143,0.923327,0.154232,0.463347,0.528893,0.251892,0.14085,0.745682,0.306895,0.239737,0.632588,0.139567,0.200446,0.812047,0.745424,0.389116,0.260815,0.487921,0.0408246,0.122538,0.0397666,0.146177,0.896247,0.34286,0.64612,0.106777,0.861772,0.752965,0.098883,0.0845678,0.194588,0.12165,0.785555,0.200595,0.250009,0.202536,0.232405,0.453481,0.587358,0.188158,0.452131,0.965707,0.195328,0.166299,0.423157,0.570756,0.391942,0.336984,0.208359,1.50959,0.667509,1.01514,0.380596,0.859886,0.0999006,0.0851645,0.11799,0.585564,0.268256,0.650602,0.372449,0.323653,0.37794,0.620862,0.1613,0.336133,0.599262,0.40535,0.539768,3.60514e-05,0.00141773,0.0846612,0.269174,1.11136,0.753896,0.516018,0.402998,0.509424,0.764896,0.125834,0.15207,0.438691,0.272612,0.46301,0.13295,0.398316,0.433978,0.362101,0.301097,0.394926,0.349366,0.541302,0.0917674,0.0472968,0.261459,0.431643,0.516221,0.133204,0.70928,0.353647,0.00350216,0.1149,0.308176,0.279389,0.578146,0.267369,0.143829,0.215895,0.812657,0.866303,0.189628,0.407146,0.616494,1.26128,0.516623,0.752499,0.629526,1.15145,0.765929,0.31363,0.112299,0.432429,0.726382,1.55835,1.16239,0.691851,1.06196,0.43571,0.302448,0.486671,0.289694,1.40098,0.342157,0.110545,0.100722,0.0402951,0.516957,0.188592,0.569975,0.888975,0.257209,0.181063,0.0919218,0.268897,0.690731,0.500787,0.983923,0.273059,0.314905,0.207576,0.24603,0.563058,0.0152141|tfbs_overrepresentation_jaspar=MA0003.1;0.0017346,MA0004.1;0.130779,MA0006.1;0.0525289,MA0007.1;0.120068,MA0009.1;0.480543,MA0014.1;0.0210893,MA0017.1;0.0687354,MA0019.1;0.227177,MA0024.1;0.391254,MA0025.1;0.599238,MA0027.1;2.03861,MA0028.1;0.0589063,MA0029.1;0.407394,MA0030.1;0.397801,MA0031.1;0.912186,MA0038.1;1.08158,MA0040.1;1.06051,MA0041.1;0.141769,MA0042.1;1.84685,MA0043.1;0.480818,MA0046.1;0.47108,MA0048.1;0.128228,MA0050.1;0.390696,MA0051.1;0.192868,MA0052.1;1.87776,MA0055.1;1.00704,MA0056.1;0,MA0057.1;0.118248,MA0058.1;0.0802423,MA0059.1;0.0796335,MA0060.1;1.32836,MA0061.1;0.15842,MA0063.1;0,MA0066.1;0.196017,MA0067.1;0.769322,MA0068.1;0.223662,MA0069.1;0.467738,MA0070.1;0.458064,MA0071.1;0.50749,MA0072.1;0.454189,MA0073.1;0.0561749,MA0074.1;0.561594,MA0076.1;0.0879186,MA0077.1;0.44756,MA0078.1;1.34069,MA0081.1;0.27336,MA0083.1;0.487092,MA0084.1;0.947429,MA0087.1;0.452083,MA0088.1;0.0453304,MA0089.1;0,MA0090.1;0.315775,MA0091.1;0.819573,MA0092.1;0.110943,MA0093.1;0.053707,MA0095.1;0,MA0098.1;0,MA0100.1;0.205224,MA0101.1;0.202181,MA0103.1;0.411939,MA0105.1;0.191442,MA0106.1;0.637762,MA0107.1;0.122976,MA0108.2;0.906703,MA0109.1;0,MA0111.1;0.102187,MA0113.1;0.236174,MA0114.1;0.118114,MA0115.1;0.697973,MA0116.1;0.872733,MA0117.1;0.513502,MA0119.1;0.537943,MA0122.1;0.53644,MA0124.1;0.659634,MA0125.1;1.42551,MA0130.1;0,MA0131.1;0.277285,MA0132.1;0,MA0133.1;0,MA0135.1;0.507125,MA0136.1;0.200538,MA0139.1;0.140093,MA0140.1;0.168354,MA0141.1;0.571374,MA0142.1;0.319458,MA0143.1;0.236302,MA0144.1;0.774342,MA0145.1;0.723202,MA0146.1;0.0288589,MA0147.1;0.031895,MA0148.1;0.876759,MA0149.1;0.162171,MA0062.2;0.0113502,MA0035.2;0.50217,MA0039.2;0.199497,MA0138.2;0.264522,MA0002.2;1.24813,MA0137.2;0.481909,MA0104.2;0.0784157,MA0047.2;0.617535,MA0112.2;0.477898,MA0065.2;1.26865,MA0150.1;0.307678,MA0151.1;0,MA0152.1;0.988857,MA0153.1;0.567879,MA0154.1;0.31593,MA0155.1;0.177814,MA0156.1;0.0625308,MA0157.1;0.807311,MA0158.1;0,MA0159.1;0.0320844,MA0160.1;0.916248,MA0161.1;0,MA0162.1;0.0253003,MA0163.1;0.00125667,MA0164.1;1.27209,MA0080.2;0.19841,MA0018.2;0.225392,MA0099.2;0.989801,MA0079.2;8.48191e-05,MA0102.2;0.983247,MA0258.1;1.07678,MA0259.1;0.0344451,MA0442.1;0}} 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Latest revision as of 11:22, 17 September 2013
Full id: C412_serous_breast_papillotubular_ductus_seminal_kidney_clear
Phase1 CAGE Peaks
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
GO ID | GO name | FDR corrected p-value |
---|---|---|
GO:0033087 | negative regulation of immature T cell proliferation | 0.00747674555516307 |
GO:0033080 | immature T cell proliferation in the thymus | 0.00747674555516307 |
GO:0033079 | immature T cell proliferation | 0.00747674555516307 |
GO:0033083 | regulation of immature T cell proliferation | 0.00747674555516307 |
GO:0033088 | negative regulation of immature T cell proliferation in the thymus | 0.00747674555516307 |
GO:0033084 | regulation of immature T cell proliferation in the thymus | 0.00747674555516307 |
GO:0005006 | epidermal growth factor receptor activity | 0.0168202015612282 |
GO:0005721 | centric heterochromatin | 0.0168202015612282 |
GO:0043125 | ErbB-3 class receptor binding | 0.0199335866525098 |
GO:0008045 | motor axon guidance | 0.0224236346827391 |
GO:0033077 | T cell differentiation in the thymus | 0.0313723029195121 |
GO:0007528 | neuromuscular junction development | 0.0313723029195121 |
GO:0016101 | diterpenoid metabolic process | 0.0313723029195121 |
GO:0017127 | cholesterol transporter activity | 0.0313723029195121 |
GO:0001523 | retinoid metabolic process | 0.0313723029195121 |
GO:0006700 | C21-steroid hormone biosynthetic process | 0.0313723029195121 |
GO:0004716 | receptor signaling protein tyrosine kinase activity | 0.0313723029195121 |
GO:0015248 | sterol transporter activity | 0.0313723029195121 |
GO:0030879 | mammary gland development | 0.0313723029195121 |
GO:0006721 | terpenoid metabolic process | 0.0313723029195121 |
GO:0008207 | C21-steroid hormone metabolic process | 0.0346241181710792 |
GO:0015485 | cholesterol binding | 0.0346241181710792 |
GO:0050679 | positive regulation of epithelial cell proliferation | 0.035064301385311 |
GO:0000792 | heterochromatin | 0.0373314928407595 |
GO:0008289 | lipid binding | 0.0413396373469942 |
GO:0007422 | peripheral nervous system development | 0.0413396373469942 |
GO:0042552 | myelination | 0.0417436404705552 |
GO:0032934 | sterol binding | 0.0417436404705552 |
GO:0031902 | late endosome membrane | 0.0417436404705552 |
GO:0050678 | regulation of epithelial cell proliferation | 0.0417436404705552 |
GO:0007272 | ensheathment of neurons | 0.0417436404705552 |
GO:0008366 | axon ensheathment | 0.0417436404705552 |
GO:0050673 | epithelial cell proliferation | 0.0417436404705552 |
GO:0042129 | regulation of T cell proliferation | 0.0417436404705552 |
GO:0000910 | cytokinesis | 0.0417436404705552 |
GO:0045765 | regulation of angiogenesis | 0.0417436404705552 |
GO:0042098 | T cell proliferation | 0.0417436404705552 |
GO:0050808 | synapse organization and biogenesis | 0.0417436404705552 |
GO:0001508 | regulation of action potential | 0.0417436404705552 |
GO:0044255 | cellular lipid metabolic process | 0.0417436404705552 |
GO:0030217 | T cell differentiation | 0.0417436404705552 |
GO:0048741 | skeletal muscle fiber development | 0.0417436404705552 |
GO:0050670 | regulation of lymphocyte proliferation | 0.0417436404705552 |
GO:0032944 | regulation of mononuclear cell proliferation | 0.0417436404705552 |
GO:0048747 | muscle fiber development | 0.0417436404705552 |
GO:0042446 | hormone biosynthetic process | 0.0418053836348106 |
GO:0006720 | isoprenoid metabolic process | 0.0428126721177308 |
GO:0048732 | gland development | 0.0428491605705884 |
GO:0006839 | mitochondrial transport | 0.043793229394858 |
GO:0005770 | late endosome | 0.0446891448334533 |
GO:0032943 | mononuclear cell proliferation | 0.0446891448334533 |
GO:0019748 | secondary metabolic process | 0.0446891448334533 |
GO:0046651 | lymphocyte proliferation | 0.0446891448334533 |
GO:0007411 | axon guidance | 0.0463340700446233 |
GO:0007059 | chromosome segregation | 0.0470624258525105 |
GO:0050863 | regulation of T cell activation | 0.0470624258525105 |
GO:0006629 | lipid metabolic process | 0.0480588986131011 |
GO:0030098 | lymphocyte differentiation | 0.0492722668622572 |
GO:0043406 | positive regulation of MAP kinase activity | 0.0497624591336918 |
GO:0007519 | skeletal muscle development | 0.0497624591336918 |
GO:0016324 | apical plasma membrane | 0.0497624591336918 |
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.83e-66 | 6 |
stromal cell of endometrium | 2.83e-66 | 6 |
stromal cell | 2.22e-15 | 28 |
endo-epithelial cell | 1.07e-10 | 42 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
uterus | 4.86e-20 | 21 |
embryonic uterus | 3.41e-19 | 22 |
internal female genitalia | 3.41e-19 | 22 |
internal genitalia | 4.64e-17 | 25 |
female reproductive organ | 5.76e-12 | 37 |
female reproductive system | 5.76e-12 | 37 |
female organism | 6.32e-11 | 41 |
reproductive organ | 1.62e-09 | 48 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.83e-66 | 6 |
adenocarcinoma | 4.64e-17 | 25 |
female reproductive organ cancer | 6.71e-16 | 27 |
reproductive organ cancer | 6.74e-15 | 29 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.0017346 |
MA0004.1 | 0.130779 |
MA0006.1 | 0.0525289 |
MA0007.1 | 0.120068 |
MA0009.1 | 0.480543 |
MA0014.1 | 0.0210893 |
MA0017.1 | 0.0687354 |
MA0019.1 | 0.227177 |
MA0024.1 | 0.391254 |
MA0025.1 | 0.599238 |
MA0027.1 | 2.03861 |
MA0028.1 | 0.0589063 |
MA0029.1 | 0.407394 |
MA0030.1 | 0.397801 |
MA0031.1 | 0.912186 |
MA0038.1 | 1.08158 |
MA0040.1 | 1.06051 |
MA0041.1 | 0.141769 |
MA0042.1 | 1.84685 |
MA0043.1 | 0.480818 |
MA0046.1 | 0.47108 |
MA0048.1 | 0.128228 |
MA0050.1 | 0.390696 |
MA0051.1 | 0.192868 |
MA0052.1 | 1.87776 |
MA0055.1 | 1.00704 |
MA0056.1 | 0 |
MA0057.1 | 0.118248 |
MA0058.1 | 0.0802423 |
MA0059.1 | 0.0796335 |
MA0060.1 | 1.32836 |
MA0061.1 | 0.15842 |
MA0063.1 | 0 |
MA0066.1 | 0.196017 |
MA0067.1 | 0.769322 |
MA0068.1 | 0.223662 |
MA0069.1 | 0.467738 |
MA0070.1 | 0.458064 |
MA0071.1 | 0.50749 |
MA0072.1 | 0.454189 |
MA0073.1 | 0.0561749 |
MA0074.1 | 0.561594 |
MA0076.1 | 0.0879186 |
MA0077.1 | 0.44756 |
MA0078.1 | 1.34069 |
MA0081.1 | 0.27336 |
MA0083.1 | 0.487092 |
MA0084.1 | 0.947429 |
MA0087.1 | 0.452083 |
MA0088.1 | 0.0453304 |
MA0089.1 | 0 |
MA0090.1 | 0.315775 |
MA0091.1 | 0.819573 |
MA0092.1 | 0.110943 |
MA0093.1 | 0.053707 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.205224 |
MA0101.1 | 0.202181 |
MA0103.1 | 0.411939 |
MA0105.1 | 0.191442 |
MA0106.1 | 0.637762 |
MA0107.1 | 0.122976 |
MA0108.2 | 0.906703 |
MA0109.1 | 0 |
MA0111.1 | 0.102187 |
MA0113.1 | 0.236174 |
MA0114.1 | 0.118114 |
MA0115.1 | 0.697973 |
MA0116.1 | 0.872733 |
MA0117.1 | 0.513502 |
MA0119.1 | 0.537943 |
MA0122.1 | 0.53644 |
MA0124.1 | 0.659634 |
MA0125.1 | 1.42551 |
MA0130.1 | 0 |
MA0131.1 | 0.277285 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 0.507125 |
MA0136.1 | 0.200538 |
MA0139.1 | 0.140093 |
MA0140.1 | 0.168354 |
MA0141.1 | 0.571374 |
MA0142.1 | 0.319458 |
MA0143.1 | 0.236302 |
MA0144.1 | 0.774342 |
MA0145.1 | 0.723202 |
MA0146.1 | 0.0288589 |
MA0147.1 | 0.031895 |
MA0148.1 | 0.876759 |
MA0149.1 | 0.162171 |
MA0062.2 | 0.0113502 |
MA0035.2 | 0.50217 |
MA0039.2 | 0.199497 |
MA0138.2 | 0.264522 |
MA0002.2 | 1.24813 |
MA0137.2 | 0.481909 |
MA0104.2 | 0.0784157 |
MA0047.2 | 0.617535 |
MA0112.2 | 0.477898 |
MA0065.2 | 1.26865 |
MA0150.1 | 0.307678 |
MA0151.1 | 0 |
MA0152.1 | 0.988857 |
MA0153.1 | 0.567879 |
MA0154.1 | 0.31593 |
MA0155.1 | 0.177814 |
MA0156.1 | 0.0625308 |
MA0157.1 | 0.807311 |
MA0158.1 | 0 |
MA0159.1 | 0.0320844 |
MA0160.1 | 0.916248 |
MA0161.1 | 0 |
MA0162.1 | 0.0253003 |
MA0163.1 | 0.00125667 |
MA0164.1 | 1.27209 |
MA0080.2 | 0.19841 |
MA0018.2 | 0.225392 |
MA0099.2 | 0.989801 |
MA0079.2 | 8.48191e-05 |
MA0102.2 | 0.983247 |
MA0258.1 | 1.07678 |
MA0259.1 | 0.0344451 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
No analysis results for this cluster
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.