FFCP PHASE1:Hg19::chr10:131344593..131344605,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:131344593..131344605,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr10:131344593..131344605,+ | |description=CAGE_peak_at_chr10:131344593..131344605,+ | ||
|id=chr10:131344593..131344605,+ | |id=chr10:131344593..131344605,+ | ||
|ontology_enrichment_celltype=CL:0000349!1.04e-54!3;CL:0002577!1.04e-54!3;CL:0002536!5.69e-37!2;CL:0000810!3.91e-19!1;CL:0000895!3.91e-19!1;CL:0002436!3.91e-19!1;CL:0002427!3.91e-19!1;CL:0002428!3.91e-19!1;CL:0002429!3.91e-19!1;CL:0002433!3.91e-19!1;CL:0002431!3.91e-19!1;CL:0002432!3.91e-19!1;CL:0002537!1.05e-15!5;CL:0000893!2.99e-10!2;CL:0002489!2.99e-10!2;CL:0000809!2.99e-10!2;CL:0000808!2.99e-10!2;CL:0000894!2.99e-10!2;CL:0000806!2.99e-10!2;CL:0000807!2.99e-10!2;CL:0000805!2.99e-10!2;CL:0002425!2.99e-10!2;CL:0002541!2.79e-07!3;CL:0000898!2.97e-07!3 | |ontology_enrichment_celltype=CL:0000349!1.04e-54!3;CL:0002577!1.04e-54!3;CL:0002536!5.69e-37!2;CL:0000810!3.91e-19!1;CL:0000895!3.91e-19!1;CL:0002436!3.91e-19!1;CL:0002427!3.91e-19!1;CL:0002428!3.91e-19!1;CL:0002429!3.91e-19!1;CL:0002433!3.91e-19!1;CL:0002431!3.91e-19!1;CL:0002432!3.91e-19!1;CL:0002537!1.05e-15!5;CL:0000893!2.99e-10!2;CL:0002489!2.99e-10!2;CL:0000809!2.99e-10!2;CL:0000808!2.99e-10!2;CL:0000894!2.99e-10!2;CL:0000806!2.99e-10!2;CL:0000807!2.99e-10!2;CL:0000805!2.99e-10!2;CL:0002425!2.99e-10!2;CL:0002541!2.79e-07!3;CL:0000898!2.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;2.27e-84;3!CL:0000349;1.97e-72;19!CL:0002536;1.13e-56;2!CL:0002537;8.09e-24;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.27e-84,3;CL:0000349,1.97e-72,19;CL:0002536,1.13e-56,2;CL:0002537,8.09e-24,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.39e-103!14;UBERON:0000158!3.39e-103!14;UBERON:0001987!6.70e-72!4;UBERON:0004340!6.70e-72!4;UBERON:0003124!6.58e-64!7;UBERON:0000478!3.94e-60!24;UBERON:0000305!7.97e-42!7;UBERON:0004871!1.14e-36!8;UBERON:0004923!3.98e-25!57;UBERON:0000995!4.16e-14!21;UBERON:0005795!1.75e-13!22;UBERON:0003975!1.75e-13!22;UBERON:0004175!6.57e-12!25;UBERON:0003134!3.81e-08!37;UBERON:0000474!3.81e-08!37;UBERON:0000064!1.52e-07!219;UBERON:0003100!2.24e-07!41;UBERON:0000476!2.79e-07!3;UBERON:0000920!2.79e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!3.39e-103!14;UBERON:0000158!3.39e-103!14;UBERON:0001987!6.70e-72!4;UBERON:0004340!6.70e-72!4;UBERON:0003124!6.58e-64!7;UBERON:0000478!3.94e-60!24;UBERON:0000305!7.97e-42!7;UBERON:0004871!1.14e-36!8;UBERON:0004923!3.98e-25!57;UBERON:0000995!4.16e-14!21;UBERON:0005795!1.75e-13!22;UBERON:0003975!1.75e-13!22;UBERON:0004175!6.57e-12!25;UBERON:0003134!3.81e-08!37;UBERON:0000474!3.81e-08!37;UBERON:0000064!1.52e-07!219;UBERON:0003100!2.24e-07!41;UBERON:0000476!2.79e-07!3;UBERON:0000920!2.79e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.12e-64;7!UBERON:0001987;1.46e-63;4!UBERON:0000478;1.82e-57;24!UBERON:0005631;1.57e-45;10!UBERON:0000158;1.57e-45;10!UBERON:0000077;3.93e-10;27!UBERON:0004923;2.52e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.60e-98,14;UBERON:0000158,4.60e-98,14;UBERON:0000305,1.12e-64,7;UBERON:0001987,1.46e-63,4;UBERON:0004340,1.46e-63,4;UBERON:0000478,1.82e-57,24;UBERON:0004871,1.06e-56,8;UBERON:0003124,9.10e-37,7;UBERON:0004923,3.53e-21,66;UBERON:0000995,8.05e-13,21;UBERON:0005795,2.85e-12,22;UBERON:0003975,2.85e-12,22;UBERON:0004175,6.93e-11,25;UBERON:0000077,1.76e-09,29;UBERON:0003134,1.43e-07,37;UBERON:0000474,1.43e-07,37;UBERON:0003081,5.76e-07,203;UBERON:0003100,6.81e-07,41 | |||
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|short_description=p@chr10:131344593..131344605,+ | |short_description=p@chr10:131344593..131344605,+ | ||
}} | }} |
Latest revision as of 11:40, 23 July 2015
Short description: | p@chr10:131344593..131344605, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:131344593..131344605, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.27e-84 | 3 |
extraembryonic cell | 1.97e-72 | 19 |
amniotic epithelial cell | 1.13e-56 | 2 |
amnion mesenchymal stem cell | 8.09e-24 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.60e-98 | 14 |
membranous layer | 4.60e-98 | 14 |
amnion | 1.12e-64 | 7 |
placenta | 1.46e-63 | 4 |
allantois | 1.46e-63 | 4 |
extraembryonic structure | 1.82e-57 | 24 |
somatic layer of lateral plate mesoderm | 1.06e-56 | 8 |
chorion | 9.10e-37 | 7 |
organ component layer | 3.53e-21 | 66 |
uterus | 8.05e-13 | 21 |
embryonic uterus | 2.85e-12 | 22 |
internal female genitalia | 2.85e-12 | 22 |
internal genitalia | 6.93e-11 | 25 |
mixed endoderm/mesoderm-derived structure | 1.76e-09 | 29 |
female reproductive organ | 1.43e-07 | 37 |
female reproductive system | 1.43e-07 | 37 |
lateral plate mesoderm | 5.76e-07 | 203 |
female organism | 6.81e-07 | 41 |