FFCP PHASE1:Hg19::chr10:3762768..3762779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3762768..3762779,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:3762768..3762779,- | |description=CAGE_peak_at_chr10:3762768..3762779,- | ||
|id=chr10:3762768..3762779,- | |id=chr10:3762768..3762779,- | ||
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|ontology_enrichment_celltype_v019=CL:0000860;3.57e-49;33!CL:0002057;3.57e-49;33!CL:0000473;4.76e-37;39!CL:0000234;4.76e-37;39!CL:0000766;1.57e-26;69!CL:0000576;4.97e-23;48!CL:0000094;2.57e-15;8!CL:0000763;1.25e-13;100!CL:0000097;1.50e-13;5!CL:0000081;3.46e-11;11!CL:0000775;3.53e-11;3!CL:0002087;4.90e-08;104!CL:0000163;9.34e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.58e-50,72;CL:0000860,1.58e-42,42;CL:0002057,1.58e-42,42;CL:0000473,7.61e-37,48;CL:0000234,7.61e-37,48;CL:0000839,1.71e-36,66;CL:0000557,6.60e-36,67;CL:0000763,3.01e-32,108;CL:0000049,3.01e-32,108;CL:0002194,6.97e-29,59;CL:0000576,6.97e-29,59;CL:0000040,6.97e-29,59;CL:0000559,6.97e-29,59;CL:0002009,7.43e-28,61;CL:0000738,7.55e-25,136;CL:0002032,2.15e-20,161;CL:0000837,2.15e-20,161;CL:0000037,2.21e-19,168;CL:0002031,1.20e-18,120;CL:0000988,3.38e-18,177;CL:0000094,1.71e-15,8;CL:0000097,1.50e-13,5;CL:0002028,1.50e-13,5;CL:0002087,1.74e-13,115;CL:0000081,2.58e-11,11;CL:0000775,2.96e-11,3;CL:0000134,5.81e-08,354;CL:0000163,9.34e-08,9;CL:0002320,1.01e-07,361;CL:0000219,7.00e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-30;42!CL:0000049;5.63e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.27e-52!102;UBERON:0003061!4.27e-52!102;UBERON:0002193!2.35e-46!112;UBERON:0002371!4.88e-44!80;UBERON:0001474!3.01e-40!86;UBERON:0004765!9.76e-33!101;UBERON:0001434!9.76e-33!101;UBERON:0002405!1.80e-32!115;UBERON:0003081!2.20e-21!216;UBERON:0002204!9.12e-16!167;UBERON:0002384!5.49e-11!375;UBERON:0000178!1.31e-10!15;UBERON:0000179!1.31e-10!15;UBERON:0000463!1.31e-10!15 | |ontology_enrichment_uberon=UBERON:0002390!4.27e-52!102;UBERON:0003061!4.27e-52!102;UBERON:0002193!2.35e-46!112;UBERON:0002371!4.88e-44!80;UBERON:0001474!3.01e-40!86;UBERON:0004765!9.76e-33!101;UBERON:0001434!9.76e-33!101;UBERON:0002405!1.80e-32!115;UBERON:0003081!2.20e-21!216;UBERON:0002204!9.12e-16!167;UBERON:0002384!5.49e-11!375;UBERON:0000178!1.31e-10!15;UBERON:0000179!1.31e-10!15;UBERON:0000463!1.31e-10!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.29e-32,98;UBERON:0003061,3.29e-32,98;UBERON:0002371,2.63e-31,76;UBERON:0002193,6.67e-29,108;UBERON:0001474,8.60e-29,82;UBERON:0004765,5.92e-26,90;UBERON:0002405,5.15e-25,93;UBERON:0001434,4.88e-23,100;UBERON:0003081,1.30e-13,203;UBERON:0002204,1.96e-12,167;UBERON:0002384,2.13e-07,371;UBERON:0000926,2.36e-07,315;UBERON:0004120,2.36e-07,315;UBERON:0006603,2.36e-07,315 | |||
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| ||
|short_description=p@chr10:3762768..3762779,- | |short_description=p@chr10:3762768..3762779,- | ||
}} | }} |
Latest revision as of 13:29, 23 July 2015
Short description: | p@chr10:3762768..3762779, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3762768..3762779, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.58e-50 | 72 |
classical monocyte | 1.58e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-42 | 42 |
defensive cell | 7.61e-37 | 48 |
phagocyte | 7.61e-37 | 48 |
myeloid lineage restricted progenitor cell | 1.71e-36 | 66 |
granulocyte monocyte progenitor cell | 6.60e-36 | 67 |
myeloid cell | 3.01e-32 | 108 |
common myeloid progenitor | 3.01e-32 | 108 |
monopoietic cell | 6.97e-29 | 59 |
monocyte | 6.97e-29 | 59 |
monoblast | 6.97e-29 | 59 |
promonocyte | 6.97e-29 | 59 |
macrophage dendritic cell progenitor | 7.43e-28 | 61 |
leukocyte | 7.55e-25 | 136 |
hematopoietic oligopotent progenitor cell | 2.15e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-20 | 161 |
hematopoietic stem cell | 2.21e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 1.20e-18 | 120 |
hematopoietic cell | 3.38e-18 | 177 |
granulocyte | 1.71e-15 | 8 |
mast cell | 1.50e-13 | 5 |
basophil mast progenitor cell | 1.50e-13 | 5 |
nongranular leukocyte | 1.74e-13 | 115 |
blood cell | 2.58e-11 | 11 |
neutrophil | 2.96e-11 | 3 |
mesenchymal cell | 5.81e-08 | 354 |
endocrine cell | 9.34e-08 | 9 |
connective tissue cell | 1.01e-07 | 361 |
motile cell | 7.00e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.29e-32 | 98 |
blood island | 3.29e-32 | 98 |
bone marrow | 2.63e-31 | 76 |
hemolymphoid system | 6.67e-29 | 108 |
bone element | 8.60e-29 | 82 |
skeletal element | 5.92e-26 | 90 |
immune system | 5.15e-25 | 93 |
skeletal system | 4.88e-23 | 100 |
lateral plate mesoderm | 1.30e-13 | 203 |
musculoskeletal system | 1.96e-12 | 167 |
connective tissue | 2.13e-07 | 371 |
mesoderm | 2.36e-07 | 315 |
mesoderm-derived structure | 2.36e-07 | 315 |
presumptive mesoderm | 2.36e-07 | 315 |