FFCP PHASE1:Hg19::chr11:66673490..66673527,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:66673490..66673527,- | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_at_chr11:66673490..66673527,- | |description=CAGE_peak_at_chr11:66673490..66673527,- | ||
|id=chr11:66673490..66673527,- | |id=chr11:66673490..66673527,- | ||
|ontology_enrichment_celltype=CL:0002076!1.10e-12!43;CL:0000223!1.51e-12!59;CL:0000066!2.33e-09!254;CL:0002368!1.86e-08!13;CL:0002159!3.79e-07!13;CL:0000220!5.87e-07!246 | |ontology_enrichment_celltype=CL:0002076!1.10e-12!43;CL:0000223!1.51e-12!59;CL:0000066!2.33e-09!254;CL:0002368!1.86e-08!13;CL:0002159!3.79e-07!13;CL:0000220!5.87e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.10e-16;42!CL:0002368;1.30e-15;13!CL:0002159;1.31e-14;14!CL:0002202;6.46e-10;9!CL:0002632;6.46e-10;9!CL:0000244;3.16e-08;4!CL:0000731;3.16e-08;4!CL:0002077;2.62e-07;34!CL:0000362;3.12e-07;9!CL:0002328;5.52e-07;3!CL:0000307;6.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.70e-20,58;CL:0002076,3.44e-20,42;CL:0002368,1.94e-15,13;CL:0002159,1.45e-14,14;CL:0000066,3.31e-13,253;CL:0002202,8.65e-10,9;CL:0002632,8.65e-10,9;CL:0002077,1.81e-08,34;CL:0002321,1.96e-08,250;CL:0000244,3.26e-08,4;CL:0000731,3.26e-08,4;CL:0000362,3.39e-07,9;CL:0002328,5.54e-07,3;CL:0000068,7.05e-07,3;CL:0000069,7.05e-07,3;CL:0000307,7.05e-07,3;CL:0000377,7.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.80e-12;58!CL:0000377;6.90e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.00e-12!169;UBERON:0000925!7.00e-12!169;UBERON:0006595!7.00e-12!169;UBERON:0003102!1.35e-08!95;UBERON:0001007!1.83e-08!155;UBERON:0001555!1.83e-08!155;UBERON:0007026!1.83e-08!155;UBERON:0000475!2.82e-08!365;UBERON:0002100!4.56e-08!216;UBERON:0000161!5.42e-08!35;UBERON:0001004!6.97e-08!72;UBERON:0000165!8.39e-08!28;UBERON:0000930!8.39e-08!28;UBERON:0007196!9.45e-07!14;UBERON:0001558!9.45e-07!14;UBERON:0003104!9.59e-07!238;UBERON:0009142!9.59e-07!238 | |ontology_enrichment_uberon=UBERON:0004119!7.00e-12!169;UBERON:0000925!7.00e-12!169;UBERON:0006595!7.00e-12!169;UBERON:0003102!1.35e-08!95;UBERON:0001007!1.83e-08!155;UBERON:0001555!1.83e-08!155;UBERON:0007026!1.83e-08!155;UBERON:0000475!2.82e-08!365;UBERON:0002100!4.56e-08!216;UBERON:0000161!5.42e-08!35;UBERON:0001004!6.97e-08!72;UBERON:0000165!8.39e-08!28;UBERON:0000930!8.39e-08!28;UBERON:0007196!9.45e-07!14;UBERON:0001558!9.45e-07!14;UBERON:0003104!9.59e-07!238;UBERON:0009142!9.59e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0003729;1.17e-11;13!UBERON:0000344;1.59e-09;20!UBERON:0000486;7.40e-09;12!UBERON:0000165;1.48e-08;28!UBERON:0000161;1.51e-08;19!UBERON:0000166;1.51e-08;19!UBERON:0007196;1.51e-08;15!UBERON:0001558;1.51e-08;15!UBERON:0011135;2.57e-08;5!UBERON:0002216;2.57e-08;5!UBERON:0011134;2.57e-08;5!UBERON:0002209;2.57e-08;5!UBERON:0002213;2.57e-08;5!UBERON:0007844;2.57e-08;5!UBERON:0011138;2.57e-08;5!UBERON:0001130;2.57e-08;5!UBERON:0001066;2.57e-08;5!UBERON:0001468;2.57e-08;5!UBERON:0001828;1.90e-07;8!UBERON:0000075;5.13e-07;16!UBERON:0004815;5.52e-07;3!UBERON:0002031;5.52e-07;3!UBERON:0004905;8.43e-07;8!UBERON:0000982;8.43e-07;8!UBERON:0004770;8.43e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,1.31e-11,13;UBERON:0001004,1.50e-10,74;UBERON:0004119,2.90e-10,160;UBERON:0000925,2.90e-10,160;UBERON:0006595,2.90e-10,160;UBERON:0000344,1.54e-09,20;UBERON:0003102,8.00e-09,99;UBERON:0000166,1.71e-08,22;UBERON:0007196,1.74e-08,15;UBERON:0001558,1.74e-08,15;UBERON:0011135,1.84e-08,5;UBERON:0002216,1.84e-08,5;UBERON:0011134,1.84e-08,5;UBERON:0002209,1.84e-08,5;UBERON:0002213,1.84e-08,5;UBERON:0005856,1.84e-08,5;UBERON:0005866,1.84e-08,5;UBERON:0005863,1.84e-08,5;UBERON:0007844,1.84e-08,5;UBERON:0011138,1.84e-08,5;UBERON:0001130,1.84e-08,5;UBERON:0001066,1.84e-08,5;UBERON:0001468,1.84e-08,5;UBERON:0000165,3.87e-08,29;UBERON:0000930,3.87e-08,29;UBERON:0000161,5.75e-08,36;UBERON:0001828,1.88e-07,8;UBERON:0000075,4.01e-07,16;UBERON:0004815,5.54e-07,3;UBERON:0002031,5.54e-07,3;UBERON:0005178,5.72e-07,34;UBERON:0002224,5.72e-07,34;UBERON:0001007,7.81e-07,145;UBERON:0001555,7.81e-07,145;UBERON:0007026,7.81e-07,145;UBERON:0004905,8.23e-07,8;UBERON:0000982,8.23e-07,8;UBERON:0004770,8.23e-07,8 | |||
|phase1_expression=0,2.78330681058278,0.281908808191942,0,0,0,5.06599756336621,0,0,0,0,0.436882744260345,0,8.04481294240303,17.8954582893075,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,77.2313828562299,68.674949481441,44.3704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,2.53007406669196,0,0.144846518960824,0,2.43317435151318,0,0,0.351339142772504,0,49.5441592077857,19.2807910247903,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,66.7223899778078,1.49091585508596,0,0.132409180813219,2.0078563452417,0.709336764396714,0,0,0,0.311211035399766,0,0.163461903113459,12.4113090668844,21.89468513024,0.234321431833797,0,1.1409436430889,0.298897361103602,0.117434498643765,0,0.140450806702248,2.85815839756851,1.35117749042945,3.09977343527296,0,0,0.910161361938026,0,0.673344455816265,1.62654075833553,0.554128230968366,0.438977620880838,0,0,0,1.07633781413317,0,0,0.600182192168805,0,0,0,0.843881661206331,0,0.757301322732344,0,0,0,0.10075209822764,0,25.5104326175552,30.2748193855826,24.3783906080653,0,0,0,0.10366105501537,0,0,0,0,0,0,2.16563844500876,0,0,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0,0.196221465125346,0,0,0,0.8231480226628,0,10.1404027857465,1.96565443335525,2.36315962672562,0,0,0.343135620597051,56.0823958438077,48.3327539007764,24.5290692684379,25.0914686379615,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,9.3733833986777,17.1341770762837,23.9599914339633,6.08997954379368,12.7878932946143,49.4563656123122,0,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0,0,0.285826432630578,3.47606361470618,1.30788020649984,2.27348686044945,0.129271715757778,3.57656445851882,0,0,0,0.771622122786426,0,1.0656887160644,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,14.5049451107306,1.89885516589815,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0.783204629850962,1.71571711905428,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0.128139149255701,0.511707249066704,0.482561763430822,0,0.462629081407967,0.532685175939381,1.06765302817952,1.55776328755086,1.16210378459959,0,27.2688799612467,2.94659164594868,0.229628896329213,1.0925470080403,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0,21.8220904438545,35.1032532859721,1.6068392984416,0.193341436584244,1.84858340537573,3.07007349452259,0.689182862422653,1.39646318328756,2.17525040871343,0.511359764496605,0.0890320356467374,9.58652509093673,6.3422722230485,30.2442128612164,2.023155617111,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.74129687641568,0,1.86079184679834,0.316379424718726,0.190630193923825,0.511795582622668,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.353437207037059,0,1.58510321173008,0,0,2.92456187557541,0,0,0.141405431953713,0,0.551365343546124,0,0,3.47265320560013,0.655894752046633,0,2.478587984798,0,0,0,0,0.354761064070598,1.05553817648832,0,0.379473173765715,0,30.2137433958108,69.0411343801861,47.9120333389819,0,31.857397577671,10.1082885400575,37.2481328970808,19.0670422171776,0,0,0,0,0,0,0,0,0,7.69983884210687,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,1.02268682502155,0,0,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0.724999575434793,0.455173793141999,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,3.48559360696508,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,1.39010475182674,0,0,0,2.31694369112849,0.627865836814451,1.19472429772959,0,1.10939738410511,0,20.3824186621905,0.34823682632161,0,0,0.967563312890852,0.65780385377567,0.985385484638511,2.23074737923365,0,0.225980740780532,0,0,0,0.977756913674015,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57566364614447,0.988990300573997,1.61768505250044,0,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0.630445658393585,0,1.6896053843105,12.3708264139663,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0.170388021785422,0.113312091520126,2.19828350517124,7.95041333473328,0.129282956361551,0,0,2.81926008926669,0,0,0,0,0,0,9.57511886655273,0.544017803369474,0.2506898940227,0.306345576763462,1.31149052283922,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0.499921631848426,0.454947352624943,0.285465333544967,15.7628099197775,0,0,0.298509605773748,0.701139929541673,3.88364103051829,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,1.70980920641059,0.147855149989634,1.11507737014592,0,0,3.7323558705677,0,0,0,0,0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| ||
|short_description=p@chr11:66673490..66673527,- | |short_description=p@chr11:66673490..66673527,- | ||
}} | }} |
Latest revision as of 01:24, 24 July 2015
Short description: | p@chr11:66673490..66673527, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66673490..66673527, - |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.70e-20 | 58 |
endo-epithelial cell | 3.44e-20 | 42 |
respiratory epithelial cell | 1.94e-15 | 13 |
general ecto-epithelial cell | 1.45e-14 | 14 |
epithelial cell | 3.31e-13 | 253 |
epithelial cell of tracheobronchial tree | 8.65e-10 | 9 |
epithelial cell of lower respiratory tract | 8.65e-10 | 9 |
ecto-epithelial cell | 1.81e-08 | 34 |
embryonic cell | 1.96e-08 | 250 |
transitional epithelial cell | 3.26e-08 | 4 |
urothelial cell | 3.26e-08 | 4 |
epidermal cell | 3.39e-07 | 9 |
bronchial epithelial cell | 5.54e-07 | 3 |
duct epithelial cell | 7.05e-07 | 3 |
branched duct epithelial cell | 7.05e-07 | 3 |
tracheal epithelial cell | 7.05e-07 | 3 |
tracheoblast | 7.05e-07 | 3 |