FFCP PHASE1:Hg19::chr12:130529575..130529613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000538806_5end | |association_with_transcript=0bp_to_ENST00000538806_5end | ||
|cluster_id=chr12:130529575..130529613,- | |||
|coexpression_cluster_id=C321 | |coexpression_cluster_id=C321 | ||
|description=CAGE_peak_1_at_ENST00000538806_5end | |description=CAGE_peak_1_at_ENST00000538806_5end | ||
|id=chr12:130529575..130529613,- | |id=chr12:130529575..130529613,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;3.26e-12;1!CL:0002535;5.73e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.20e-12,1;CL:0002535,5.73e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.58e-33;3!UBERON:0005425;3.26e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;7.03e-13;1!DOID:1357;7.03e-13;1!DOID:4362;4.55e-10;5!DOID:0050615;7.46e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.03e-13,1;DOID:1357,7.03e-13,1;DOID:4362,4.55e-10,5;DOID:0050615,6.95e-07,16 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004732;1.01e-29;13!UBERON:0004733;1.27e-22;12!UBERON:0002028;1.27e-22;12!UBERON:0002680;1.18e-19;9!UBERON:0001895;1.18e-19;9!UBERON:0002037;5.15e-17;6!UBERON:0001764;7.03e-13;1!UBERON:0001825;7.03e-13;1!UBERON:0000941;3.26e-12;1!UBERON:0001785;3.26e-12;1!UBERON:0002464;3.26e-12;1!UBERON:0004904;3.26e-12;1!UBERON:0001021;3.26e-12;1!UBERON:0000002;1.55e-08;6!UBERON:0001560;1.55e-08;6!UBERON:0002298;3.50e-08;6!UBERON:0006955;5.73e-07;2!UBERON:0004801;5.73e-07;2!UBERON:0000073;9.62e-07;53!UBERON:0002616;9.62e-07;53!UBERON:0003714;9.81e-07;2!UBERON:0005162;9.81e-07;2!UBERON:0000122;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004732,9.90e-30,13;UBERON:0003076,8.16e-26,15;UBERON:0003057,8.16e-26,15;UBERON:0004733,1.33e-22,12;UBERON:0002028,1.33e-22,12;UBERON:0007277,1.33e-22,12;UBERON:0002680,1.04e-19,9;UBERON:0001895,1.04e-19,9;UBERON:0010092,1.04e-19,9;UBERON:0002037,4.62e-17,6;UBERON:0006215,4.62e-17,6;UBERON:0001764,7.03e-13,1;UBERON:0001825,7.03e-13,1;UBERON:0000941,2.75e-12,1;UBERON:0001785,2.75e-12,1;UBERON:0002464,2.75e-12,1;UBERON:0004904,2.75e-12,1;UBERON:0001021,2.75e-12,1;UBERON:0003902,2.75e-12,1;UBERON:0005425,2.75e-12,1;UBERON:0001049,2.39e-11,56;UBERON:0005068,2.39e-11,56;UBERON:0006241,2.39e-11,56;UBERON:0007135,2.39e-11,56;UBERON:0003075,1.62e-09,82;UBERON:0007284,1.62e-09,82;UBERON:0000073,3.15e-09,53;UBERON:0002616,3.15e-09,53;UBERON:0002346,5.00e-09,86;UBERON:0000002,1.55e-08,6;UBERON:0001560,1.55e-08,6;UBERON:0001016,1.78e-08,89;UBERON:0002298,3.90e-08,6;UBERON:0001017,1.63e-07,81;UBERON:0010371,2.76e-07,104;UBERON:0000955,5.72e-07,68;UBERON:0006238,5.72e-07,68;UBERON:0006955,5.73e-07,2;UBERON:0004801,5.73e-07,2;UBERON:0003714,9.02e-07,2;UBERON:0005162,9.02e-07,2;UBERON:0000122,9.02e-07,2 | |||
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|short_description=p1@ENST00000538806 | |short_description=p1@ENST00000538806 | ||
}} | }} |
Latest revision as of 06:43, 24 July 2015
Short description: | p1@ENST00000538806 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000538806_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | 0bp_to_ENST00000538806_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.20e-12 | 1 |
epithelial cell of cervix | 5.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.03e-13 | 1 |
maxillary sinus cancer | 7.03e-13 | 1 |
cervical cancer | 4.55e-10 | 5 |
respiratory system cancer | 6.95e-07 | 16 |