FFCP PHASE1:Hg19::chr12:3982744..3982748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:3982744..3982748,+ | |||
|coexpression_cluster_id=C616 | |coexpression_cluster_id=C616 | ||
|description=CAGE_peak_at_chr12:3982744..3982748,+ | |description=CAGE_peak_at_chr12:3982744..3982748,+ | ||
|id=chr12:3982744..3982748,+ | |id=chr12:3982744..3982748,+ | ||
|ontology_enrichment_celltype=CL:0002087!6.25e-45!119;CL:0000738!6.96e-44!140;CL:0002057!7.83e-42!42;CL:0000037!7.30e-41!172;CL:0000566!7.30e-41!172;CL:0002031!9.65e-41!124;CL:0000988!4.99e-39!182;CL:0000860!2.23e-38!45;CL:0002032!2.79e-34!165;CL:0000837!2.79e-34!165;CL:0002194!8.96e-26!63;CL:0000576!8.96e-26!63;CL:0000040!8.96e-26!63;CL:0000559!8.96e-26!63;CL:0000839!1.46e-25!70;CL:0000557!4.60e-25!71;CL:0002009!1.07e-24!65;CL:0000766!2.79e-24!76;CL:0000763!1.18e-18!112;CL:0000049!1.18e-18!112;CL:0000838!2.49e-15!52;CL:0000542!6.43e-15!53;CL:0000051!6.43e-15!53;CL:0000134!1.84e-13!358;CL:0000084!3.54e-13!25;CL:0000827!3.54e-13!25;CL:0002320!7.56e-13!365;CL:0000219!2.90e-11!390;CL:0000791!2.03e-10!18;CL:0000789!2.03e-10!18;CL:0002420!2.03e-10!18;CL:0002419!2.03e-10!18;CL:0000790!2.03e-10!18;CL:0000048!3.84e-09!430;CL:0000723!9.06e-09!436;CL:0000034!2.73e-08!444;CL:0000623!4.30e-08!3;CL:0000825!4.30e-08!3 | |ontology_enrichment_celltype=CL:0002087!6.25e-45!119;CL:0000738!6.96e-44!140;CL:0002057!7.83e-42!42;CL:0000037!7.30e-41!172;CL:0000566!7.30e-41!172;CL:0002031!9.65e-41!124;CL:0000988!4.99e-39!182;CL:0000860!2.23e-38!45;CL:0002032!2.79e-34!165;CL:0000837!2.79e-34!165;CL:0002194!8.96e-26!63;CL:0000576!8.96e-26!63;CL:0000040!8.96e-26!63;CL:0000559!8.96e-26!63;CL:0000839!1.46e-25!70;CL:0000557!4.60e-25!71;CL:0002009!1.07e-24!65;CL:0000766!2.79e-24!76;CL:0000763!1.18e-18!112;CL:0000049!1.18e-18!112;CL:0000838!2.49e-15!52;CL:0000542!6.43e-15!53;CL:0000051!6.43e-15!53;CL:0000134!1.84e-13!358;CL:0000084!3.54e-13!25;CL:0000827!3.54e-13!25;CL:0002320!7.56e-13!365;CL:0000219!2.90e-11!390;CL:0000791!2.03e-10!18;CL:0000789!2.03e-10!18;CL:0002420!2.03e-10!18;CL:0002419!2.03e-10!18;CL:0000790!2.03e-10!18;CL:0000048!3.84e-09!430;CL:0000723!9.06e-09!436;CL:0000034!2.73e-08!444;CL:0000623!4.30e-08!3;CL:0000825!4.30e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.61e-37;33!CL:0002057;9.61e-37;33!CL:0000623;1.35e-30;3!CL:0000473;8.25e-23;39!CL:0000234;8.25e-23;39!CL:0000576;2.02e-20;48!CL:0000766;7.48e-10;69!CL:0002087;2.57e-09;104!CL:0000624;1.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.13e-32,42;CL:0002057,2.13e-32,42;CL:0000623,4.44e-31,3;CL:0000825,4.44e-31,3;CL:0000473,3.90e-28,48;CL:0000234,3.90e-28,48;CL:0002087,2.18e-25,115;CL:0002031,3.10e-24,120;CL:0002194,3.69e-22,59;CL:0000576,3.69e-22,59;CL:0000040,3.69e-22,59;CL:0000559,3.69e-22,59;CL:0002009,2.18e-21,61;CL:0000738,4.13e-21,136;CL:0000839,1.17e-19,66;CL:0000557,2.41e-19,67;CL:0000766,6.76e-18,72;CL:0002032,1.86e-17,161;CL:0000837,1.86e-17,161;CL:0000037,1.26e-16,168;CL:0000988,1.18e-15,177;CL:0000763,2.21e-11,108;CL:0000049,2.21e-11,108;CL:0000624,1.63e-07,6;CL:0000134,1.77e-07,354;CL:0002320,2.82e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.49e-29!102;UBERON:0003061!5.49e-29!102;UBERON:0002193!3.00e-25!112;UBERON:0002371!2.27e-24!80;UBERON:0001474!6.03e-22!86;UBERON:0002405!3.28e-19!115;UBERON:0004765!2.61e-18!101;UBERON:0001434!2.61e-18!101;UBERON:0002384!5.13e-12!375;UBERON:0003081!7.02e-10!216;UBERON:0002204!2.01e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!5.49e-29!102;UBERON:0003061!5.49e-29!102;UBERON:0002193!3.00e-25!112;UBERON:0002371!2.27e-24!80;UBERON:0001474!6.03e-22!86;UBERON:0002405!3.28e-19!115;UBERON:0004765!2.61e-18!101;UBERON:0001434!2.61e-18!101;UBERON:0002384!5.13e-12!375;UBERON:0003081!7.02e-10!216;UBERON:0002204!2.01e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.53e-20,76;UBERON:0001474,2.49e-18,82;UBERON:0004765,1.52e-16,90;UBERON:0002405,5.93e-16,93;UBERON:0002390,4.78e-15,98;UBERON:0003061,4.78e-15,98;UBERON:0001434,1.04e-14,100;UBERON:0002193,1.76e-13,108;UBERON:0002204,4.99e-08,167;UBERON:0002384,5.30e-07,371 | |||
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| ||
|short_description=p@chr12:3982744..3982748,+ | |short_description=p@chr12:3982744..3982748,+ | ||
}} | }} |
Latest revision as of 08:19, 24 July 2015
Short description: | p@chr12:3982744..3982748, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:3982744..3982748, + |
Coexpression cluster: | C616_CD14_Natural_CD8_Basophils_Mast_Eosinophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.13e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.13e-32 | 42 |
natural killer cell | 4.44e-31 | 3 |
pro-NK cell | 4.44e-31 | 3 |
defensive cell | 3.90e-28 | 48 |
phagocyte | 3.90e-28 | 48 |
nongranular leukocyte | 2.18e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 3.10e-24 | 120 |
monopoietic cell | 3.69e-22 | 59 |
monocyte | 3.69e-22 | 59 |
monoblast | 3.69e-22 | 59 |
promonocyte | 3.69e-22 | 59 |
macrophage dendritic cell progenitor | 2.18e-21 | 61 |
leukocyte | 4.13e-21 | 136 |
myeloid lineage restricted progenitor cell | 1.17e-19 | 66 |
granulocyte monocyte progenitor cell | 2.41e-19 | 67 |
myeloid leukocyte | 6.76e-18 | 72 |
hematopoietic oligopotent progenitor cell | 1.86e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-17 | 161 |
hematopoietic stem cell | 1.26e-16 | 168 |
hematopoietic cell | 1.18e-15 | 177 |
myeloid cell | 2.21e-11 | 108 |
common myeloid progenitor | 2.21e-11 | 108 |
CD4-positive, alpha-beta T cell | 1.63e-07 | 6 |
mesenchymal cell | 1.77e-07 | 354 |
connective tissue cell | 2.82e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.53e-20 | 76 |
bone element | 2.49e-18 | 82 |
skeletal element | 1.52e-16 | 90 |
immune system | 5.93e-16 | 93 |
hematopoietic system | 4.78e-15 | 98 |
blood island | 4.78e-15 | 98 |
skeletal system | 1.04e-14 | 100 |
hemolymphoid system | 1.76e-13 | 108 |
musculoskeletal system | 4.99e-08 | 167 |
connective tissue | 5.30e-07 | 371 |