FFCP PHASE1:Hg19::chr12:56121612..56121634,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=967 | |EntrezGene=967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1692 | |HGNC=1692 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZE2 | |UniProt=F8VZE2 | ||
|association_with_transcript=-13bp_to_ENST00000550776_5end | |association_with_transcript=-13bp_to_ENST00000550776_5end | ||
|cluster_id=chr12:56121612..56121634,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_19_at_CD63_5end | |description=CAGE_peak_19_at_CD63_5end | ||
|id=chr12:56121612..56121634,- | |id=chr12:56121612..56121634,- | ||
|ontology_enrichment_celltype=CL:0000055!5.02e-12!180;CL:0000148!2.50e-09!10;CL:0000541!2.50e-09!10;CL:0000147!6.62e-09!14;CL:0000325!1.22e-07!39;CL:0000710!4.35e-07!20;CL:0000144!6.88e-07!625 | |ontology_enrichment_celltype=CL:0000055!5.02e-12!180;CL:0000148!2.50e-09!10;CL:0000541!2.50e-09!10;CL:0000147!6.62e-09!14;CL:0000325!1.22e-07!39;CL:0000710!4.35e-07!20;CL:0000144!6.88e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.42e-23;10!CL:0000147;4.98e-21;14!CL:0002567;1.41e-15;3!CL:0000710;3.65e-11;20!CL:0002600;8.39e-10;2!CL:0000075;5.26e-08;27!CL:0002540;1.35e-07;6!CL:0002521;3.88e-07;3!CL:0002573;5.27e-07;2!CL:0002590;8.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.43e-23,10;CL:0000541,2.43e-23,10;CL:0000147,4.75e-21,14;CL:0000333,6.16e-16,41;CL:0002567,1.45e-15,3;CL:0000710,3.66e-11,20;CL:0000133,2.10e-10,59;CL:0002600,5.84e-10,2;CL:0000221,4.25e-08,72;CL:0000075,5.27e-08,27;CL:0002540,1.42e-07,6;CL:0002521,3.66e-07,3;CL:0002573,4.53e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.10e-07!14 | |ontology_enrichment_disease=DOID:2394!7.10e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.75e-15;3!DOID:127;3.75e-15;3!DOID:0060072;1.75e-11;4!DOID:1909;3.93e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.76e-15,3;DOID:127,3.76e-15,3;DOID:0060072,1.76e-11,4;DOID:1909,3.94e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004290!5.36e-08!70;UBERON:0000486!1.14e-07!82;UBERON:0000914!7.35e-07!83;UBERON:0002329!7.35e-07!83;UBERON:0003077!7.35e-07!83;UBERON:0003059!7.35e-07!83;UBERON:0007282!7.35e-07!83;UBERON:0009618!7.35e-07!83;UBERON:0007285!7.35e-07!83 | |ontology_enrichment_uberon=UBERON:0004290!5.36e-08!70;UBERON:0000486!1.14e-07!82;UBERON:0000914!7.35e-07!83;UBERON:0002329!7.35e-07!83;UBERON:0003077!7.35e-07!83;UBERON:0003059!7.35e-07!83;UBERON:0007282!7.35e-07!83;UBERON:0009618!7.35e-07!83;UBERON:0007285!7.35e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.66e-07,3 | |||
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| ||
|short_description=p19@CD63 | |short_description=p19@CD63 | ||
}} | }} |
Latest revision as of 08:13, 19 September 2015
Short description: | p19@CD63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CD63_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -13bp_to_ENST00000550776_5end |
EntrezGene: | CD63 |
HGNC: | 1692 |
UniProt: | F8VZE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.43e-23 | 10 |
melanoblast | 2.43e-23 | 10 |
pigment cell | 4.75e-21 | 14 |
migratory neural crest cell | 6.16e-16 | 41 |
light melanocyte | 1.45e-15 | 3 |
neurecto-epithelial cell | 3.66e-11 | 20 |
neurectodermal cell | 2.10e-10 | 59 |
smooth muscle cell of trachea | 5.84e-10 | 2 |
ectodermal cell | 4.25e-08 | 72 |
columnar/cuboidal epithelial cell | 5.27e-08 | 27 |
mesenchymal stem cell of the bone marrow | 1.42e-07 | 6 |
subcutaneous fat cell | 3.66e-07 | 3 |
Schwann cell | 4.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.76e-15 | 3 |
leiomyoma | 3.76e-15 | 3 |
benign neoplasm | 1.76e-11 | 4 |
melanoma | 3.94e-11 | 2 |