FFCP PHASE1:Hg19::chr12:58934549..58934562,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:58934549..58934562,+ | |||
|coexpression_cluster_id=C181 | |coexpression_cluster_id=C181 | ||
|description=CAGE_peak_at_chr12:58934549..58934562,+ | |description=CAGE_peak_at_chr12:58934549..58934562,+ | ||
|id=chr12:58934549..58934562,+ | |id=chr12:58934549..58934562,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.34e-15!23;CL:0000055!7.36e-13!180;CL:0000057!6.08e-12!75 | |ontology_enrichment_celltype=CL:0002620!2.34e-15!23;CL:0000055!7.36e-13!180;CL:0000057!6.08e-12!75 | ||
|ontology_enrichment_celltype_v019=CL:0002561;6.48e-18;2!CL:0002564;2.74e-12;3!CL:0002559;5.73e-08;5!CL:0002569;8.72e-07;6!CL:0000138;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,6.48e-18,2;CL:0002564,2.31e-12,3;CL:0002559,5.73e-08,5;CL:0002569,8.48e-07,6;CL:0000058,9.49e-07,6;CL:0000138,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.12e-07!5;DOID:450!1.12e-07!5;DOID:66!1.12e-07!5;DOID:423!1.12e-07!5;DOID:0080000!1.12e-07!5;DOID:11722!1.12e-07!5 | |ontology_enrichment_disease=DOID:17!1.12e-07!5;DOID:450!1.12e-07!5;DOID:66!1.12e-07!5;DOID:423!1.12e-07!5;DOID:0080000!1.12e-07!5;DOID:11722!1.12e-07!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!4.38e-10!40;UBERON:0002199!1.63e-08!45;UBERON:0002416!1.63e-08!45 | |ontology_enrichment_uberon=UBERON:0002097!4.38e-10!40;UBERON:0002199!1.63e-08!45;UBERON:0002416!1.63e-08!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;6.48e-18;2!UBERON:0005942;6.48e-18;2!UBERON:0005932;6.48e-18;2!UBERON:0002242;2.74e-12;3!UBERON:0002073;5.73e-08;5!UBERON:0011135;6.78e-08;5!UBERON:0002216;6.78e-08;5!UBERON:0011134;6.78e-08;5!UBERON:0002209;6.78e-08;5!UBERON:0002213;6.78e-08;5!UBERON:0007844;6.78e-08;5!UBERON:0011138;6.78e-08;5!UBERON:0001130;6.78e-08;5!UBERON:0001066;6.78e-08;5!UBERON:0001468;6.78e-08;5!UBERON:0003422;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,6.48e-18,2;UBERON:0005942,6.48e-18,2;UBERON:0005932,6.48e-18,2;UBERON:0002242,2.31e-12,3;UBERON:0003068,2.31e-12,3;UBERON:0002328,2.31e-12,3;UBERON:0004880,2.31e-12,3;UBERON:0002073,5.73e-08,5;UBERON:0005086,5.73e-08,5;UBERON:0011135,6.13e-08,5;UBERON:0002216,6.13e-08,5;UBERON:0011134,6.13e-08,5;UBERON:0002209,6.13e-08,5;UBERON:0002213,6.13e-08,5;UBERON:0005856,6.13e-08,5;UBERON:0005866,6.13e-08,5;UBERON:0005863,6.13e-08,5;UBERON:0007844,6.13e-08,5;UBERON:0011138,6.13e-08,5;UBERON:0001130,6.13e-08,5;UBERON:0001066,6.13e-08,5;UBERON:0001468,6.13e-08,5;UBERON:0003422,8.48e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.990130823680373,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0.309977343527296,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.640672166455702,0.847727604638247,0,0.618315175430633,0.257640540045629,0.37223371266318,0,0,0.252433774244115,1.01254888506529,0.484938170456436,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,1.50051156317903,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0.732219924186332,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,10.3936693289107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.990130823680373,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0.309977343527296,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.640672166455702,0.847727604638247,0,0.618315175430633,0.257640540045629,0.37223371266318,0,0,0.252433774244115,1.01254888506529,0.484938170456436,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,1.50051156317903,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0.732219924186332,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,10.3936693289107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:58934549..58934562,+ | |short_description=p@chr12:58934549..58934562,+ | ||
}} | }} |
Latest revision as of 11:01, 24 July 2015
Short description: | p@chr12:58934549..58934562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:58934549..58934562, + |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 6.48e-18 | 2 |
nucleus pulposus cell of intervertebral disc | 2.31e-12 | 3 |
hair follicle cell | 5.73e-08 | 5 |
mesenchymal stem cell of umbilical cord | 8.48e-07 | 6 |
chondroblast | 9.49e-07 | 6 |
chondrocyte | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 6.48e-18 | 2 |
hair outer root sheath | 6.48e-18 | 2 |
bulb of hair follicle | 6.48e-18 | 2 |
nucleus pulposus | 2.31e-12 | 3 |
axial mesoderm | 2.31e-12 | 3 |
notochord | 2.31e-12 | 3 |
chordamesoderm | 2.31e-12 | 3 |
hair follicle | 5.73e-08 | 5 |
hair follicle placode | 5.73e-08 | 5 |
intervertebral cartilage | 6.13e-08 | 5 |
symphysis | 6.13e-08 | 5 |
nonsynovial joint | 6.13e-08 | 5 |
fibrous joint | 6.13e-08 | 5 |
cartilaginous joint | 6.13e-08 | 5 |
developing mesenchymal condensation | 6.13e-08 | 5 |
pre-cartilage condensation | 6.13e-08 | 5 |
cartilaginous condensation | 6.13e-08 | 5 |
cartilage element | 6.13e-08 | 5 |
post-cranial axial skeletal system | 6.13e-08 | 5 |
vertebral column | 6.13e-08 | 5 |
intervertebral disk | 6.13e-08 | 5 |
intervertebral joint | 6.13e-08 | 5 |
mesenchyme of umbilical cord | 8.48e-07 | 6 |