FFCP PHASE1:Hg19::chr12:71003739..71003750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5787 | |EntrezGene=5787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9665 | |HGNC=9665 | ||
|TSSclassifier=strong | |||
|UniProt=P23467,B7ZKS8,F5H3G6 | |UniProt=P23467,B7ZKS8,F5H3G6 | ||
|association_with_transcript=-115bp_to_ENST00000261266,NM_001206971,NM_001206972,NM_002837,uc001swb.3,uc010sto.1,uc010stp.1_5end | |association_with_transcript=-115bp_to_ENST00000261266,NM_001206971,NM_001206972,NM_002837,uc001swb.3,uc010sto.1,uc010stp.1_5end | ||
|cluster_id=chr12:71003739..71003750,- | |||
|coexpression_cluster_id=C2237 | |coexpression_cluster_id=C2237 | ||
|description=CAGE_peak_8_at_PTPRB_5end | |description=CAGE_peak_8_at_PTPRB_5end | ||
|id=chr12:71003739..71003750,- | |id=chr12:71003739..71003750,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.67e-10;4!UBERON:0007284;8.67e-10;4!UBERON:0004872;3.64e-09;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;7.77e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.96e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-46!115;UBERON:0000025!6.31e-19!194;UBERON:0000477!1.54e-18!286;UBERON:0004111!6.41e-18!241;UBERON:0001049!2.83e-16!57;UBERON:0005068!2.83e-16!57;UBERON:0006241!2.83e-16!57;UBERON:0007135!2.83e-16!57;UBERON:0003075!5.62e-16!86;UBERON:0007284!5.62e-16!86;UBERON:0002346!1.35e-14!90;UBERON:0004872!2.08e-14!84;UBERON:0001981!1.49e-12!60;UBERON:0007500!1.49e-12!60;UBERON:0004537!1.49e-12!60;UBERON:0006965!1.49e-12!60;UBERON:0002616!2.59e-12!59;UBERON:0000055!3.65e-12!69;UBERON:0001017!8.86e-12!82;UBERON:0005743!1.40e-11!86;UBERON:0000955!1.83e-11!69;UBERON:0006238!1.83e-11!69;UBERON:0003080!1.92e-11!42;UBERON:0000073!2.36e-11!94;UBERON:0001016!2.36e-11!94;UBERON:0002049!2.85e-11!79;UBERON:0007798!2.85e-11!79;UBERON:0000483!5.29e-11!309;UBERON:0001893!5.30e-11!34;UBERON:0000119!1.24e-10!312;UBERON:0002780!1.27e-10!41;UBERON:0001890!1.27e-10!41;UBERON:0006240!1.27e-10!41;UBERON:0002020!1.69e-10!34;UBERON:0003528!1.69e-10!34;UBERON:0002791!2.67e-10!33;UBERON:0001009!3.16e-10!113;UBERON:0001869!9.22e-10!32;UBERON:0003056!6.93e-09!61;UBERON:0000153!9.19e-09!129;UBERON:0007811!9.19e-09!129;UBERON:0004535!1.28e-08!110;UBERON:0001637!1.35e-08!42;UBERON:0003509!1.35e-08!42;UBERON:0004572!1.35e-08!42;UBERON:0000468!1.88e-08!659;UBERON:0002619!4.02e-08!22;UBERON:0001950!5.40e-08!20;UBERON:0004573!9.89e-08!33;UBERON:0004571!9.89e-08!33;UBERON:0000033!1.05e-07!123;UBERON:0000467!1.14e-07!625;UBERON:0000481!1.35e-07!347;UBERON:0000480!1.37e-07!626;UBERON:0003914!2.46e-07!118;UBERON:0007100!8.76e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!2.47e-46!115;UBERON:0000025!6.31e-19!194;UBERON:0000477!1.54e-18!286;UBERON:0004111!6.41e-18!241;UBERON:0001049!2.83e-16!57;UBERON:0005068!2.83e-16!57;UBERON:0006241!2.83e-16!57;UBERON:0007135!2.83e-16!57;UBERON:0003075!5.62e-16!86;UBERON:0007284!5.62e-16!86;UBERON:0002346!1.35e-14!90;UBERON:0004872!2.08e-14!84;UBERON:0001981!1.49e-12!60;UBERON:0007500!1.49e-12!60;UBERON:0004537!1.49e-12!60;UBERON:0006965!1.49e-12!60;UBERON:0002616!2.59e-12!59;UBERON:0000055!3.65e-12!69;UBERON:0001017!8.86e-12!82;UBERON:0005743!1.40e-11!86;UBERON:0000955!1.83e-11!69;UBERON:0006238!1.83e-11!69;UBERON:0003080!1.92e-11!42;UBERON:0000073!2.36e-11!94;UBERON:0001016!2.36e-11!94;UBERON:0002049!2.85e-11!79;UBERON:0007798!2.85e-11!79;UBERON:0000483!5.29e-11!309;UBERON:0001893!5.30e-11!34;UBERON:0000119!1.24e-10!312;UBERON:0002780!1.27e-10!41;UBERON:0001890!1.27e-10!41;UBERON:0006240!1.27e-10!41;UBERON:0002020!1.69e-10!34;UBERON:0003528!1.69e-10!34;UBERON:0002791!2.67e-10!33;UBERON:0001009!3.16e-10!113;UBERON:0001869!9.22e-10!32;UBERON:0003056!6.93e-09!61;UBERON:0000153!9.19e-09!129;UBERON:0007811!9.19e-09!129;UBERON:0004535!1.28e-08!110;UBERON:0001637!1.35e-08!42;UBERON:0003509!1.35e-08!42;UBERON:0004572!1.35e-08!42;UBERON:0000468!1.88e-08!659;UBERON:0002619!4.02e-08!22;UBERON:0001950!5.40e-08!20;UBERON:0004573!9.89e-08!33;UBERON:0004571!9.89e-08!33;UBERON:0000033!1.05e-07!123;UBERON:0000467!1.14e-07!625;UBERON:0000481!1.35e-07!347;UBERON:0000480!1.37e-07!626;UBERON:0003914!2.46e-07!118;UBERON:0007100!8.76e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.65e-13;3!UBERON:0000946;6.65e-13;3!UBERON:0004151;2.08e-12;3!UBERON:0007100;1.99e-11;25!UBERON:0002133;2.45e-09;2!UBERON:0002081;7.77e-09;2!UBERON:0007023;1.99e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-24,114;UBERON:0003978,2.65e-13,3;UBERON:0009751,2.65e-13,3;UBERON:0000946,2.65e-13,3;UBERON:0002523,2.65e-13,3;UBERON:0005983,2.65e-13,3;UBERON:0002165,2.65e-13,3;UBERON:0002062,2.65e-13,3;UBERON:0007280,2.65e-13,3;UBERON:0004151,6.48e-13,3;UBERON:0007100,9.04e-11,27;UBERON:0004797,1.59e-09,7;UBERON:0002133,1.97e-09,2;UBERON:0002081,5.26e-09,2;UBERON:0010227,5.26e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0,0.351339142772504,1.57174890597255,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,0.516833518338658,0.71153252537342,1.00416183829401,0,0,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0.337834441449967,0,0.949265659568129,0,0,0,0,0.496971951695318,0.379891534993739,1.05927344650575,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.561320188866147,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0.616067160352178,2.66153015158511,0.869932992075073,0.55597265731176,0.858749320451947,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,1.38141957765574,0,0.102268682502155,0,0.622079175323615,0.449341755736634,0,0,0.394573622547734,0,0,0,0.649376687132959,0,0,0,2.17499872630438,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.663475559587348,0.591095237907095,1.97446857438575,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0.816164040795739,0,0,0,0.884575645033392,1.22206028986725,0,0,0,0.67401132980677,0.802577647298789,0.702793337176017,0,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.04836000945218,2.40780445460263,0,0.0730893170861856,0,0.290967049465258,0.353024506766001,0.225980740780532,0,0,0.696418755514666,0,0,1.49417096317547,0,0.288180834308212,0,0,0,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0.429765441419957,0,4.46851842035607,1.83328339209347,1.43574604915363,1.39775300349294,1.71690419254628,3.12440040418622,1.2764859772478,0.360299883542404,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,1.15424157650247,0,1.65491985328316,0.314727528809989,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0.340776043570843,0,0.732761168390412,0,0.129282956361551,0.26446520348538,0,0,3.09683496446315,6.9169894243853,7.45630299624952,0,0,0,0,0,1.0027595760908,0.919036730290385,0,0,0,0.366078794705889,0.500763722825999,0,0.776503360757966,1.4903136705932,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.295710299979268,0.796483835818512,0,0,0,1.06336685823198,0,0.150257608997218,1.14241563650639,0,0.181848659202559,0.644463342254931,3.24823631914946,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0.706756583783524,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,1.41696576325585,0.319267718114302,0.615349092722265,0.252071696221718,0.899044282034833,0.968853873791107,2.85538840518309,0.0981477185010256,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.742913430802341,0,0.620060389503552,1.01465296310251,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.227662191351298,1.5966426629275,0,0,1.4953341254903,0.920818829879887,0,0,0.313972371402056,0.157115589916002,0,0,0,0,2.21577286947635,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0.098150233615243,0,1.29485767437579,0.718639647993729,0,0.485710993059139,0.467878926924211,0,0,0,0,0,0.231522474323834,0,0.940634592723046,0.245148321753905,0,0.981542335574726,0.297046400327086,0.4226557275834,0.509781344063451,0.657887425858975,1.80482086326016,0,0,0,0,0,0.917458566809082,0.430018749454354,0,1.08786384305464,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0.20686599172379,0.852935927603924,0.714193294391221,0.0645889098360061,0.372448285775147,0.33639558774184,0.509177266225319,0.606351566874658,0.870866991587845,1.36893320434112,0.134704106029175,0.358611026963382,0.665320713092027,0,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| ||
|short_description=p8@PTPRB | |short_description=p8@PTPRB | ||
}} | }} |
Latest revision as of 15:54, 24 September 2015
Short description: | p8@PTPRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PTPRB_5end |
Coexpression cluster: | C2237_lung_heart_adipose_breast_left_MCF7_retina |
Association with transcript: | -115bp_to_ENST00000261266, NM_001206971, NM_001206972, NM_002837, uc001swb.3, uc010sto.1, uc010stp.1_5end |
EntrezGene: | PTPRB |
HGNC: | 9665 |
UniProt: | P23467B7ZKS8F5H3G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-24 | 114 |
valve | 2.65e-13 | 3 |
cardiac mesenchyme | 2.65e-13 | 3 |
cardial valve | 2.65e-13 | 3 |
tunica intima | 2.65e-13 | 3 |
heart layer | 2.65e-13 | 3 |
endocardium | 2.65e-13 | 3 |
endocardial cushion | 2.65e-13 | 3 |
presumptive endocardium | 2.65e-13 | 3 |
cardiac chamber | 6.48e-13 | 3 |
primary circulatory organ | 9.04e-11 | 27 |
blood vessel layer | 1.59e-09 | 7 |
atrioventricular valve | 1.97e-09 | 2 |
cardiac atrium | 5.26e-09 | 2 |
future cardiac atrium | 5.26e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.96e-09 | 2 |