FFCP PHASE1:Hg19::chr13:37633604..37633625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55578 | |EntrezGene=55578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20596 | |HGNC=20596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488590_5end | |association_with_transcript=0bp_to_ENST00000488590_5end | ||
|cluster_id=chr13:37633604..37633625,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_FAM48A_5end | |description=CAGE_peak_2_at_FAM48A_5end | ||
|id=chr13:37633604..37633625,- | |id=chr13:37633604..37633625,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.16e-11;5!CL:0000771;1.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.29e-11,5;CL:0002028,5.29e-11,5;CL:0000771,1.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.81e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.90e-12;10!UBERON:0000178;4.94e-08;15!UBERON:0000179;4.94e-08;15!UBERON:0000463;4.94e-08;15!UBERON:0001905;1.81e-07;2!UBERON:0001873;1.81e-07;2!UBERON:0002757;1.81e-07;2!UBERON:0010134;1.81e-07;2!UBERON:0005408;1.81e-07;2!UBERON:0001899;1.81e-07;2!UBERON:0000473;2.45e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.00e-12,10;UBERON:0000358,7.00e-12,10;UBERON:0000307,7.00e-12,10;UBERON:0000091,7.00e-12,10;UBERON:0000087,7.00e-12,10;UBERON:0007010,7.00e-12,10;UBERON:0007806,7.00e-12,10;UBERON:0008780,7.00e-12,10;UBERON:0005728,7.00e-12,10;UBERON:0000178,4.22e-08,15;UBERON:0000179,4.22e-08,15;UBERON:0000463,4.22e-08,15;UBERON:0001873,1.45e-07,2;UBERON:0010122,1.45e-07,2;UBERON:0000473,2.37e-07,8;UBERON:0001905,2.40e-07,2;UBERON:0002757,2.40e-07,2;UBERON:0010134,2.40e-07,2;UBERON:0005408,2.40e-07,2;UBERON:0001899,2.40e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0.328402357799783,0.157421562627358,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0.154934401160603,0.284338464974843,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0,0,0,1.32171328579026,0,0.263384084775077,0.590129310341499,0,0,0.167186495390678,0,0,0,0.445641827540694,0.589211814949674,0,0.270803863765016,0,0,0,0,0.579606171470105,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0,0.255973222308837,0,0.236777252044017,0.821127996921047,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,2.81605012320082,0,0.741568885568859,0,0,0.531831842075461,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,1.05927344650575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.358779271377724,0,0,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.389748020644795,0,0.0920498986422993,0,0,0.503760491138201,0.169560592310488,0,0,0,0.365921118388786,0.795178609928912,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0.283550194484773,0.358234090811393,0,0,6.40462209264727,0.44024217006613,1.24396869324463,0.576479813667846,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0.473107245101804,0,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.120859449591622,0.601519410909855,0.0920809889358963,0.114814448164607,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0.671624264166535,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0.178064071293475,0.495854746082934,0,0.765676274967505,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.320472213382419,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0.383010740264733,0.423347165447766,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0,0.296964680832639,0.614321404198464,0,0.703347082052564,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,1.04171104434093,0.61221999997337,0,0.341380344856499,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0.221158519862449,0,0.658156191461918,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,2.37216902944498,1.85345908419754,1.35748534357092,0.539209063845416,0,0,0,0,0,0.789168805698781,0,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0.853828638089378,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.379864775735272,0.782205530939212,0.160317640503067,0,0.19980960958213,0.144090417154106,0.343609788497747,0.171594997861965,0,0.372757606696298,0,0.271808412147228,0.104602846312333,0,0.288950589901519,0.600420288709789,0.273810757783986,0,0,1.05154941711726,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0.472699093843342,0.247247575143499,0.13480708770837,0.0984274815147488,0.084673332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| ||
|short_description=p2@FAM48A | |short_description=p2@FAM48A | ||
}} | }} |
Latest revision as of 06:32, 17 September 2015
Short description: | p2@FAM48A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM48A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000488590_5end |
EntrezGene: | FAM48A |
HGNC: | 20596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.29e-11 | 5 |
basophil mast progenitor cell | 5.29e-11 | 5 |
eosinophil | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.00e-12 | 10 |
blastocyst | 7.00e-12 | 10 |
blastula | 7.00e-12 | 10 |
bilaminar disc | 7.00e-12 | 10 |
inner cell mass | 7.00e-12 | 10 |
cleaving embryo | 7.00e-12 | 10 |
connecting stalk | 7.00e-12 | 10 |
inner cell mass derived epiblast | 7.00e-12 | 10 |
extraembryonic mesoderm | 7.00e-12 | 10 |
blood | 4.22e-08 | 15 |
haemolymphatic fluid | 4.22e-08 | 15 |
organism substance | 4.22e-08 | 15 |
caudate nucleus | 1.45e-07 | 2 |
future caudate nucleus | 1.45e-07 | 2 |
testis | 2.37e-07 | 8 |
pineal body | 2.40e-07 | 2 |
regional part of epithalamus | 2.40e-07 | 2 |
secretory circumventricular organ | 2.40e-07 | 2 |
circumventricular organ | 2.40e-07 | 2 |
epithalamus | 2.40e-07 | 2 |