FFCP PHASE1:Hg19::chr14:105217167..105217171,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:105217167..105217171,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr14:105217167..105217171,- | |description=CAGE_peak_at_chr14:105217167..105217171,- | ||
|id=chr14:105217167..105217171,- | |id=chr14:105217167..105217171,- | ||
|ontology_enrichment_celltype=CL:0002150!2.57e-10!3;CL:0000861!2.57e-10!3;CL:0000817!2.86e-09!3 | |ontology_enrichment_celltype=CL:0002150!2.57e-10!3;CL:0000861!2.57e-10!3;CL:0000817!2.86e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.05e-34;1!CL:0000911;3.05e-34;1!CL:0000814;3.05e-34;1!CL:0001014;1.07e-17;2!CL:0001016;1.07e-17;2!CL:0000453;7.01e-08;5!CL:0000840;8.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.61e-34,1;CL:0000914,3.61e-34,1;CL:0000911,3.61e-34,1;CL:0000814,3.61e-34,1;CL:0002042,3.61e-34,1;CL:0002039,3.61e-34,1;CL:0002040,3.61e-34,1;CL:0002041,3.61e-34,1;CL:0000893,7.67e-18,2;CL:0002489,7.67e-18,2;CL:0000809,7.67e-18,2;CL:0000808,7.67e-18,2;CL:0000894,7.67e-18,2;CL:0000806,7.67e-18,2;CL:0000807,7.67e-18,2;CL:0000805,7.67e-18,2;CL:0002425,7.67e-18,2;CL:0001014,9.07e-18,2;CL:0001016,9.07e-18,2;CL:0000453,6.55e-08,5;CL:0000840,8.48e-07,5;CL:0001029,8.48e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002425;7.05e-18;2 | |||
|ontology_enrichment_disease=DOID:2531!2.14e-17!51;DOID:0060083!2.14e-17!51;DOID:162!6.96e-16!235;DOID:14566!2.61e-15!239;DOID:0050686!9.26e-14!137;DOID:1036!1.45e-12!8;DOID:1240!2.59e-11!39;DOID:0060058!1.53e-09!10;DOID:305!2.94e-07!106 | |ontology_enrichment_disease=DOID:2531!2.14e-17!51;DOID:0060083!2.14e-17!51;DOID:162!6.96e-16!235;DOID:14566!2.61e-15!239;DOID:0050686!9.26e-14!137;DOID:1036!1.45e-12!8;DOID:1240!2.59e-11!39;DOID:0060058!1.53e-09!10;DOID:305!2.94e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.32e-09,4;UBERON:0005058,1.32e-09,4;UBERON:0009113,1.32e-09,4;UBERON:0003295,1.32e-09,4;UBERON:0005562,1.32e-09,4;UBERON:0003351,8.02e-07,6 | |||
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| ||
|short_description=p@chr14:105217167..105217171,- | |short_description=p@chr14:105217167..105217171,- | ||
}} | }} |
Latest revision as of 18:27, 24 July 2015
Short description: | p@chr14:105217167..105217171, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105217167..105217171, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.61e-34 | 1 |
immature NK T cell | 3.61e-34 | 1 |
effector T cell | 3.61e-34 | 1 |
mature NK T cell | 3.61e-34 | 1 |
immature NK T cell stage IV | 3.61e-34 | 1 |
immature NK T cell stage I | 3.61e-34 | 1 |
immature NK T cell stage II | 3.61e-34 | 1 |
immature NK T cell stage III | 3.61e-34 | 1 |
thymocyte | 7.67e-18 | 2 |
double negative thymocyte | 7.67e-18 | 2 |
double-positive, alpha-beta thymocyte | 7.67e-18 | 2 |
DN4 thymocyte | 7.67e-18 | 2 |
DN1 thymic pro-T cell | 7.67e-18 | 2 |
DN2 thymocyte | 7.67e-18 | 2 |
DN3 thymocyte | 7.67e-18 | 2 |
immature single positive thymocyte | 7.67e-18 | 2 |
early T lineage precursor | 7.67e-18 | 2 |
CD1a-positive Langerhans cell | 9.07e-18 | 2 |
immature CD1a-positive Langerhans cell | 9.07e-18 | 2 |
Langerhans cell | 6.55e-08 | 5 |
immature conventional dendritic cell | 8.48e-07 | 5 |
common dendritic progenitor | 8.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.32e-09 | 4 |
hemolymphoid system gland | 1.32e-09 | 4 |
thymic region | 1.32e-09 | 4 |
pharyngeal gland | 1.32e-09 | 4 |
thymus primordium | 1.32e-09 | 4 |
pharyngeal epithelium | 8.02e-07 | 6 |