FFCP PHASE1:Hg19::chr14:22925600..22925628,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc001wdz.3,uc010tms.1_5end | |association_with_transcript=36bp_to_uc001wdz.3,uc010tms.1_5end | ||
|cluster_id=chr14:22925600..22925628,+ | |||
|coexpression_cluster_id=C3411 | |coexpression_cluster_id=C3411 | ||
|description=CAGE_peak_1_at_uc001wdz.3_5end,CAGE_peak_1_at_uc010tms.1_5end | |description=CAGE_peak_1_at_uc001wdz.3_5end,CAGE_peak_1_at_uc010tms.1_5end | ||
|id=chr14:22925600..22925628,+ | |id=chr14:22925600..22925628,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.17e-13!18;CL:0000789!7.17e-13!18;CL:0002420!7.17e-13!18;CL:0002419!7.17e-13!18;CL:0000790!7.17e-13!18;CL:0000625!4.30e-09!11;CL:0000084!1.62e-08!25;CL:0000827!1.62e-08!25;CL:0000623!4.07e-08!3;CL:0000825!4.07e-08!3;CL:0000898!2.54e-07!3;CL:0000037!3.56e-07!172;CL:0000566!3.56e-07!172;CL:0000842!3.96e-07!3 | |ontology_enrichment_celltype=CL:0000791!7.17e-13!18;CL:0000789!7.17e-13!18;CL:0002420!7.17e-13!18;CL:0002419!7.17e-13!18;CL:0000790!7.17e-13!18;CL:0000625!4.30e-09!11;CL:0000084!1.62e-08!25;CL:0000827!1.62e-08!25;CL:0000623!4.07e-08!3;CL:0000825!4.07e-08!3;CL:0000898!2.54e-07!3;CL:0000037!3.56e-07!172;CL:0000566!3.56e-07!172;CL:0000842!3.96e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.60e-21;3!CL:0002127;1.90e-08;1!CL:0000911;1.90e-08;1!CL:0000814;1.90e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.57e-21,3;CL:0000825,2.57e-21,3;CL:0002127,1.91e-08,1;CL:0000914,1.91e-08,1;CL:0000911,1.91e-08,1;CL:0000814,1.91e-08,1;CL:0002042,1.91e-08,1;CL:0002039,1.91e-08,1;CL:0002040,1.91e-08,1;CL:0002041,1.91e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!7.49e-09!8 | |ontology_enrichment_disease=DOID:1036!7.49e-09!8 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.36e-16!15;UBERON:0000179!2.36e-16!15;UBERON:0000463!2.36e-16!15;UBERON:0004177!2.23e-11!7;UBERON:0007023!1.19e-10!115;UBERON:0002370!5.32e-10!4;UBERON:0005058!5.32e-10!4;UBERON:0009113!5.32e-10!4;UBERON:0003295!5.32e-10!4;UBERON:0005562!5.32e-10!4 | |ontology_enrichment_uberon=UBERON:0000178!2.36e-16!15;UBERON:0000179!2.36e-16!15;UBERON:0000463!2.36e-16!15;UBERON:0004177!2.23e-11!7;UBERON:0007023!1.19e-10!115;UBERON:0002370!5.32e-10!4;UBERON:0005058!5.32e-10!4;UBERON:0009113!5.32e-10!4;UBERON:0003295!5.32e-10!4;UBERON:0005562!5.32e-10!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.99e-21;15!UBERON:0000179;2.99e-21;15!UBERON:0000463;2.99e-21;15!UBERON:0002370;1.42e-14;2!UBERON:0005058;1.42e-14;2!UBERON:0009113;1.42e-14;2!UBERON:0002390;2.51e-14;32!UBERON:0002193;3.58e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.73e-21,15;UBERON:0000179,2.73e-21,15;UBERON:0000463,2.73e-21,15;UBERON:0002370,3.02e-16,4;UBERON:0005058,3.02e-16,4;UBERON:0009113,3.02e-16,4;UBERON:0003295,3.02e-16,4;UBERON:0005562,3.02e-16,4;UBERON:0003351,5.28e-11,6;UBERON:0004177,1.69e-09,7;UBERON:0005057,1.69e-09,7;UBERON:0002390,1.46e-07,98;UBERON:0003061,1.46e-07,98;UBERON:0000974,8.91e-07,10;UBERON:0003408,8.91e-07,10;UBERON:0001042,8.91e-07,10;UBERON:0009145,8.91e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,1.33749196312542,0.977766799900771,0,0,1.22551502573691,0.883817722424512,0,1.08321545506006,0.640456598628376,0.130059347559878,0.328875809207352,0.552700035571697,0.289803085735052,0.444859689486181,0.802622484269139,1.04535523804977,0.113309342697566,0.766440987203842,1.37450978193052,1.26509846009751,1.27426165729639,2.60433381542567,2.85135613334512,0.752875595388864,0.511946444617674,0,0.947109008176067,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.41515209545629,8.27529192848094,1.50939302401662,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,3.0585488285695,2.27858874869665,1.66762242820452,0.411362273086194,1.29694662238543,3.24018862342869,0.79312517629427,0,0,0,0,0,0,0,0,10.5327953572802,0.846694330895531,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,11.8230228551676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,1.06606955203727,0,0.627921025580099,0.997270091400938,0.225595660617181,0.19606253431774,0,0.189753732724185,1.74830236878417,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,1.74847648403166,0,0,0,0,0,0,0,0.563903507879121,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,4.65040150819244,1.67601728598816,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,1.33749196312542,0.977766799900771,0,0,1.22551502573691,0.883817722424512,0,1.08321545506006,0.640456598628376,0.130059347559878,0.328875809207352,0.552700035571697,0.289803085735052,0.444859689486181,0.802622484269139,1.04535523804977,0.113309342697566,0.766440987203842,1.37450978193052,1.26509846009751,1.27426165729639,2.60433381542567,2.85135613334512,0.752875595388864,0.511946444617674,0,0.947109008176067,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.41515209545629,8.27529192848094,1.50939302401662,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,3.0585488285695,2.27858874869665,1.66762242820452,0.411362273086194,1.29694662238543,3.24018862342869,0.79312517629427,0,0,0,0,0,0,0,0,10.5327953572802,0.846694330895531,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,11.8230228551676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,1.06606955203727,0,0.627921025580099,0.997270091400938,0.225595660617181,0.19606253431774,0,0.189753732724185,1.74830236878417,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,1.74847648403166,0,0,0,0,0,0,0,0.563903507879121,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,4.65040150819244,1.67601728598816,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p1@uc001wdz.3,p1@uc010tms.1 | |short_description=p1@uc001wdz.3,p1@uc010tms.1 | ||
}} | }} |
Latest revision as of 19:12, 24 July 2015
Short description: | p1@uc001wdz.3, p1@uc010tms.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wdz.3_5end, CAGE_peak_1_at_uc010tms.1_5end |
Coexpression cluster: | C3411_NK_anaplastic_acute_thymus_Natural_Whole_CD8 |
Association with transcript: | 36bp_to_uc001wdz.3, uc010tms.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.57e-21 | 3 |
pro-NK cell | 2.57e-21 | 3 |
innate effector T cell | 1.91e-08 | 1 |
immature NK T cell | 1.91e-08 | 1 |
effector T cell | 1.91e-08 | 1 |
mature NK T cell | 1.91e-08 | 1 |
immature NK T cell stage IV | 1.91e-08 | 1 |
immature NK T cell stage I | 1.91e-08 | 1 |
immature NK T cell stage II | 1.91e-08 | 1 |
immature NK T cell stage III | 1.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.73e-21 | 15 |
haemolymphatic fluid | 2.73e-21 | 15 |
organism substance | 2.73e-21 | 15 |
thymus | 3.02e-16 | 4 |
hemolymphoid system gland | 3.02e-16 | 4 |
thymic region | 3.02e-16 | 4 |
pharyngeal gland | 3.02e-16 | 4 |
thymus primordium | 3.02e-16 | 4 |
pharyngeal epithelium | 5.28e-11 | 6 |
hemopoietic organ | 1.69e-09 | 7 |
immune organ | 1.69e-09 | 7 |
hematopoietic system | 1.46e-07 | 98 |
blood island | 1.46e-07 | 98 |
neck | 8.91e-07 | 10 |
gland of gut | 8.91e-07 | 10 |
chordate pharynx | 8.91e-07 | 10 |
pharyngeal region of foregut | 8.91e-07 | 10 |