FFCP PHASE1:Hg19::chr16:67552347..67552370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:67552347..67552370,+ | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_at_chr16:67552347..67552370,+ | |description=CAGE_peak_at_chr16:67552347..67552370,+ | ||
|id=chr16:67552347..67552370,+ | |id=chr16:67552347..67552370,+ | ||
|ontology_enrichment_celltype=CL:0000239!5.28e-26!3;CL:1000615!5.28e-26!3;CL:0002306!5.28e-26!3;CL:1000507!1.95e-17!12;CL:1000494!1.95e-17!12;CL:1000497!1.67e-16!18;CL:0002518!1.67e-16!18;CL:1000449!4.76e-13!16;CL:0002681!1.13e-10!13;CL:0002584!1.13e-10!13;CL:0000946!1.36e-09!1;CL:0000786!1.36e-09!1;CL:0000980!1.36e-09!1;CL:0000313!1.48e-09!1 | |ontology_enrichment_celltype=CL:0000239!5.28e-26!3;CL:1000615!5.28e-26!3;CL:0002306!5.28e-26!3;CL:1000507!1.95e-17!12;CL:1000494!1.95e-17!12;CL:1000497!1.67e-16!18;CL:0002518!1.67e-16!18;CL:1000449!4.76e-13!16;CL:0002681!1.13e-10!13;CL:0002584!1.13e-10!13;CL:0000946!1.36e-09!1;CL:0000786!1.36e-09!1;CL:0000980!1.36e-09!1;CL:0000313!1.48e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.12e-15;17!CL:0002518;1.12e-15;17!CL:0000650;2.21e-15;2!CL:1000500;2.21e-15;2!CL:1000618;2.21e-15;2!CL:1001318;2.21e-15;2!CL:0002173;2.21e-15;2!CL:1000507;2.98e-12;10!CL:1000494;2.98e-12;10!CL:0000239;1.04e-10;3!CL:1000615;1.04e-10;3!CL:0002306;1.04e-10;3!CL:0002681;2.24e-10;12!CL:0002584;2.24e-10;12!CL:1000449;1.71e-08;15!CL:0000669;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.24e-15,17;CL:0002518,1.24e-15,17;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:1000507,3.34e-12,10;CL:1000494,3.34e-12,10;CL:0000239,1.09e-10,3;CL:1000615,1.09e-10,3;CL:0002306,1.09e-10,3;CL:0002681,2.46e-10,12;CL:0002584,2.46e-10,12;CL:1000449,1.85e-08,15;CL:0000669,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.55e-26;10!UBERON:0007687;2.55e-26;10!UBERON:0003104;2.76e-09;31 | |||
|ontology_enrichment_disease=DOID:9119!1.06e-09!1;DOID:2152!1.48e-09!1 | |ontology_enrichment_disease=DOID:9119!1.06e-09!1;DOID:2152!1.48e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006853!5.28e-26!3;UBERON:0007685!5.28e-26!3;UBERON:0004134!5.28e-26!3;UBERON:0002113!3.60e-19!27;UBERON:0003918!3.60e-19!27;UBERON:0005095!3.60e-19!27;UBERON:0007687!3.60e-19!27;UBERON:0009773!1.95e-17!12;UBERON:0001231!1.95e-17!12;UBERON:0004810!1.95e-17!12;UBERON:0000489!5.15e-16!32;UBERON:0006554!2.85e-14!44;UBERON:0001008!6.33e-14!45;UBERON:0001851!4.41e-13!16;UBERON:0004211!4.76e-13!16;UBERON:0001285!4.76e-13!16;UBERON:0007684!4.76e-13!16;UBERON:0003220!4.76e-13!16;UBERON:0004208!4.76e-13!16;UBERON:0006555!2.84e-12!17;UBERON:0005103!2.84e-12!17;UBERON:0000083!2.84e-12!17;UBERON:0009201!2.84e-12!17;UBERON:0004819!2.84e-12!17;UBERON:0006553!2.84e-12!17;UBERON:0003074!2.84e-12!17;UBERON:0003060!2.84e-12!17;UBERON:0000080!1.39e-11!18;UBERON:0002120!1.39e-11!18;UBERON:0004875!1.39e-11!18;UBERON:0005721!1.39e-11!18;UBERON:0005754!1.39e-11!18;UBERON:0007297!1.39e-11!18;UBERON:0005172!3.42e-11!55;UBERON:0005173!3.42e-11!55;UBERON:0001225!1.13e-10!13;UBERON:0008987!1.13e-10!13;UBERON:0004876!2.08e-10!20;UBERON:0003064!2.70e-10!37;UBERON:0002417!5.83e-10!61;UBERON:0000916!5.83e-10!61;UBERON:0003887!6.64e-10!21;UBERON:0001736!8.91e-10!1;UBERON:0006298!8.91e-10!1;UBERON:0004911!1.48e-09!1;UBERON:0000353!3.41e-08!17;UBERON:0000058!5.79e-08!26;UBERON:0003103!7.41e-07!69 | |ontology_enrichment_uberon=UBERON:0006853!5.28e-26!3;UBERON:0007685!5.28e-26!3;UBERON:0004134!5.28e-26!3;UBERON:0002113!3.60e-19!27;UBERON:0003918!3.60e-19!27;UBERON:0005095!3.60e-19!27;UBERON:0007687!3.60e-19!27;UBERON:0009773!1.95e-17!12;UBERON:0001231!1.95e-17!12;UBERON:0004810!1.95e-17!12;UBERON:0000489!5.15e-16!32;UBERON:0006554!2.85e-14!44;UBERON:0001008!6.33e-14!45;UBERON:0001851!4.41e-13!16;UBERON:0004211!4.76e-13!16;UBERON:0001285!4.76e-13!16;UBERON:0007684!4.76e-13!16;UBERON:0003220!4.76e-13!16;UBERON:0004208!4.76e-13!16;UBERON:0006555!2.84e-12!17;UBERON:0005103!2.84e-12!17;UBERON:0000083!2.84e-12!17;UBERON:0009201!2.84e-12!17;UBERON:0004819!2.84e-12!17;UBERON:0006553!2.84e-12!17;UBERON:0003074!2.84e-12!17;UBERON:0003060!2.84e-12!17;UBERON:0000080!1.39e-11!18;UBERON:0002120!1.39e-11!18;UBERON:0004875!1.39e-11!18;UBERON:0005721!1.39e-11!18;UBERON:0005754!1.39e-11!18;UBERON:0007297!1.39e-11!18;UBERON:0005172!3.42e-11!55;UBERON:0005173!3.42e-11!55;UBERON:0001225!1.13e-10!13;UBERON:0008987!1.13e-10!13;UBERON:0004876!2.08e-10!20;UBERON:0003064!2.70e-10!37;UBERON:0002417!5.83e-10!61;UBERON:0000916!5.83e-10!61;UBERON:0003887!6.64e-10!21;UBERON:0001736!8.91e-10!1;UBERON:0006298!8.91e-10!1;UBERON:0004911!1.48e-09!1;UBERON:0000353!3.41e-08!17;UBERON:0000058!5.79e-08!26;UBERON:0003103!7.41e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;9.15e-30;24!UBERON:0011143;9.15e-30;24!UBERON:0000489;1.00e-24;29!UBERON:0006554;6.43e-24;30!UBERON:0001008;6.43e-24;30!UBERON:0003567;2.21e-15;2!UBERON:0003838;2.21e-15;2!UBERON:0003586;2.21e-15;2!UBERON:0005169;2.21e-15;2!UBERON:0002321;2.21e-15;2!UBERON:0005215;2.21e-15;2!UBERON:0002303;2.21e-15;2!UBERON:0002319;2.21e-15;2!UBERON:0004211;2.98e-12;10!UBERON:0009773;2.98e-12;10!UBERON:0001231;2.98e-12;10!UBERON:0004810;2.98e-12;10!UBERON:0006853;1.04e-10;3!UBERON:0007685;1.04e-10;3!UBERON:0004134;1.04e-10;3!UBERON:0005172;1.08e-10;52!UBERON:0005173;1.08e-10;52!UBERON:0001225;2.24e-10;12!UBERON:0008987;2.24e-10;12!UBERON:0001851;1.71e-08;15!UBERON:0006555;1.71e-08;15!UBERON:0000353;1.71e-08;15!UBERON:0004819;1.71e-08;15!UBERON:0001285;1.71e-08;15!UBERON:0007684;1.71e-08;15!UBERON:0003891;2.35e-08;4!UBERON:0002417;1.61e-07;58!UBERON:0000916;1.61e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.81e-27,26;UBERON:0003918,1.81e-27,26;UBERON:0011143,1.81e-27,26;UBERON:0005095,1.81e-27,26;UBERON:0007687,1.81e-27,26;UBERON:0000489,4.02e-23,31;UBERON:0006554,2.10e-15,47;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0001008,4.32e-15,48;UBERON:0005172,1.86e-13,54;UBERON:0005173,1.86e-13,54;UBERON:0004810,3.34e-12,10;UBERON:0002417,3.80e-12,60;UBERON:0000916,3.80e-12,60;UBERON:0003103,9.32e-11,68;UBERON:0006853,1.09e-10,3;UBERON:0007685,1.09e-10,3;UBERON:0004134,1.09e-10,3;UBERON:0001225,2.46e-10,12;UBERON:0008987,2.46e-10,12;UBERON:0005177,2.46e-10,101;UBERON:0009569,2.45e-09,112;UBERON:0001851,1.85e-08,15;UBERON:0004211,1.85e-08,15;UBERON:0009773,1.85e-08,15;UBERON:0000353,1.85e-08,15;UBERON:0001231,1.85e-08,15;UBERON:0001285,1.85e-08,15;UBERON:0007684,1.85e-08,15;UBERON:0004208,1.85e-08,15;UBERON:0003891,2.61e-08,4;UBERON:0006555,5.46e-08,16;UBERON:0004819,5.46e-08,16 | |||
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|short_description=p@chr16:67552347..67552370,+ | |short_description=p@chr16:67552347..67552370,+ | ||
}} | }} |
Latest revision as of 11:27, 25 July 2015
Short description: | p@chr16:67552347..67552370, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67552347..67552370, + |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.24e-15 | 17 |
kidney epithelial cell | 1.24e-15 | 17 |
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
kidney tubule cell | 3.34e-12 | 10 |
nephron tubule epithelial cell | 3.34e-12 | 10 |
brush border epithelial cell | 1.09e-10 | 3 |
kidney cortex tubule cell | 1.09e-10 | 3 |
epithelial cell of proximal tubule | 1.09e-10 | 3 |
kidney cortical cell | 2.46e-10 | 12 |
renal cortical epithelial cell | 2.46e-10 | 12 |
epithelial cell of nephron | 1.85e-08 | 15 |
pericyte cell | 2.61e-08 | 4 |