FFCP PHASE1:Hg19::chr17:19290483..19290510,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4239 | |EntrezGene=4239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7035 | |HGNC=7035 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002gvs.2,uc002gvt.2_5end | |association_with_transcript=0bp_to_uc002gvs.2,uc002gvt.2_5end | ||
|cluster_id=chr17:19290483..19290510,- | |||
|coexpression_cluster_id=C1046 | |coexpression_cluster_id=C1046 | ||
|description=CAGE_peak_1_at_MFAP4_5end | |description=CAGE_peak_1_at_MFAP4_5end | ||
|id=chr17:19290483..19290510,- | |id=chr17:19290483..19290510,- | ||
|ontology_enrichment_celltype=CL:0000055!2.48e-19!180;CL:0000057!2.78e-15!75;CL:0000136!3.32e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.48e-19!180;CL:0000057!2.78e-15!75;CL:0000136!3.32e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000057;3.90e-07;73!CL:0002620;6.70e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.65e-16,76;CL:0000136,1.88e-07,15;CL:0002620,6.56e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.20e-12!115;UBERON:0000475!2.95e-11!365;UBERON:0000468!4.06e-10!659;UBERON:0000924!1.17e-09!173;UBERON:0006601!1.17e-09!173;UBERON:0004121!2.44e-08!169;UBERON:0000914!6.54e-08!83;UBERON:0002329!6.54e-08!83;UBERON:0003077!6.54e-08!83;UBERON:0003059!6.54e-08!83;UBERON:0007282!6.54e-08!83;UBERON:0009618!6.54e-08!83;UBERON:0007285!6.54e-08!83;UBERON:0002385!8.98e-08!63;UBERON:0001015!8.98e-08!63;UBERON:0000383!8.98e-08!63;UBERON:0000481!1.70e-07!347;UBERON:0003102!3.06e-07!95;UBERON:0000479!4.00e-07!787;UBERON:0001134!4.50e-07!61;UBERON:0002036!4.50e-07!61;UBERON:0003082!4.50e-07!61;UBERON:0004290!5.07e-07!70;UBERON:0002346!7.91e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!4.20e-12!115;UBERON:0000475!2.95e-11!365;UBERON:0000468!4.06e-10!659;UBERON:0000924!1.17e-09!173;UBERON:0006601!1.17e-09!173;UBERON:0004121!2.44e-08!169;UBERON:0000914!6.54e-08!83;UBERON:0002329!6.54e-08!83;UBERON:0003077!6.54e-08!83;UBERON:0003059!6.54e-08!83;UBERON:0007282!6.54e-08!83;UBERON:0009618!6.54e-08!83;UBERON:0007285!6.54e-08!83;UBERON:0002385!8.98e-08!63;UBERON:0001015!8.98e-08!63;UBERON:0000383!8.98e-08!63;UBERON:0000481!1.70e-07!347;UBERON:0003102!3.06e-07!95;UBERON:0000479!4.00e-07!787;UBERON:0001134!4.50e-07!61;UBERON:0002036!4.50e-07!61;UBERON:0003082!4.50e-07!61;UBERON:0004290!5.07e-07!70;UBERON:0002346!7.91e-07!90 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.98e-12,114;UBERON:0004121,4.40e-10,171;UBERON:0000924,4.40e-10,171;UBERON:0006601,4.40e-10,171;UBERON:0000479,4.64e-09,773;UBERON:0002385,5.97e-08,64;UBERON:0001015,5.97e-08,64;UBERON:0000383,5.97e-08,64;UBERON:0007524,9.15e-08,73;UBERON:0010314,1.16e-07,132;UBERON:0003077,2.47e-07,72;UBERON:0007285,2.47e-07,72;UBERON:0001134,3.15e-07,62;UBERON:0002036,3.15e-07,62;UBERON:0003082,3.15e-07,62;UBERON:0002329,3.17e-07,71;UBERON:0003059,3.17e-07,71;UBERON:0007282,3.17e-07,71;UBERON:0004290,3.17e-07,71;UBERON:0009618,3.17e-07,71;UBERON:0003102,4.78e-07,99;UBERON:0002346,6.56e-07,86 | |||
|phase1_expression=96.1078626341245,89.7081195103219,286.983166739397,87.0637695672235,504.619075608408,189.29745972978,91.1879561405918,347.445930384757,244.992119251449,2.7030733015166,0,2.83973783769224,5.53910654279752,225.007229681365,107.372749735845,18.8251041006497,16.2727522566474,14.6062018077475,17.5655807564582,36.8131963649596,46.7161582949339,172.713551534426,21.7539350219603,9.30746090495612,17.9525974620568,0,0,0,0.393364276848904,0.767658796194425,0.77408061658038,0,0,0,0,0,5.5784083473621,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0,1.01778767145695,0.755751887377619,0.970336244751265,1.16214518452842,0.411167888021826,1.23882548358041,0,0.512321413058201,0.236482229888585,2.06847408441971,1.29096936716765,0,1.88242339542605,1.36453075028923,1.34834090667051,2.14258724659632,1.28371610830437,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,1.86846674698672,0.502497330513487,0,0.217188844705117,11.502590550034,0.368277635987565,1.58231193720442,0.633765858935825,0.637812899895131,0,0,0.300353785683013,0.16072558669708,0,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,380.33871144978,91.2153169196945,54.2137262216569,19.156275076382,64.6725904720298,65.0360870134099,45.3312989819127,59.8560890472242,52.6558931603858,50.9977614163897,33.0258794206154,181.733467253076,0,0,0,0,0,1.43094374583205,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.549605231791222,0,0,0,75.0427647059931,95.9859278417515,5.56118559415519,760.117044984356,75.8990337904484,122.788394431165,2.1349799145941,7.64669400093196,243.367029682617,3.63718814588158,9.48079038058061,1410.49986822312,882.125340378878,136.140751895436,17.1688042256676,3.99330275081114,17.4854956245607,5.87172493218824,4.20869655357142,2.52811452064047,12.2492502752936,11.3007571926827,71.3981147924539,230.472554312718,171.35598199004,46.4182294588393,190.433807581303,14.6452419140038,8.88341491090946,9.97430815743058,32.0453663243012,22.3736090933284,57.2407004434134,6.69249880644124,73.3703609967445,613.336820686926,313.235349913832,113.734525415988,191.574651854258,86.3095809152858,174.577611239031,191.89868975832,189.222664023048,112.333029538631,708.692169647063,393.608148353807,415.006213651922,121.003269971396,48.324768808489,0,0,0,18.4180296255689,8.34937540425357,29.2808736031186,12.4393266018445,14.6346093507864,4.01475094983413,10.9514672630871,131.221151391349,0,340.381691247441,247.604662212668,0,0,0,0,0,0,0,0,0,0,0,313.619396634527,1699.42070361687,0,4.91413608338813,30.721075147433,0.441463099414651,0.491953754172454,16.642077598957,0,0,0.100528972411631,0.740707561268237,107.842549057717,12.4792174233549,11.5465073620219,13.563857382084,116.704242070407,0,0,0.190254152234598,0,0,0,0,0.148631162288728,1.87467667973554,0,0,0,0,3.83382679165211,0,0,5.1832028885193,3.02651902175619,4.29224273649692,3.11139682031628,0,0,30.7930402840869,7.09509699652932,0,0,24.4445763872886,64.5220901873255,18.2612331694166,42.6596662000667,436.340863939297,12.67954128834,272.320631382907,71.7651314688426,5.14414748524284,8.5109479213967,5.32844358032199,676.428887996696,1029.35318542757,41.1620168390384,11.7265026345745,582.13201204029,19.0068449504023,15.9762869841581,15.6876022548053,11.8967859506648,0,0,0,56.3118410405219,499.649420878395,0,7.38384664004654,11.0957214177207,13.2505112797523,0,0,0,0,13.2129204595681,15.6167824629146,20.1055091322201,10.0509759200609,7.65526501983796,0,0,0,754.798057056149,134.545870165053,38.7908983890622,79.4448691047683,84.7537696786518,87.9979475889355,241.077032055004,478.203352467345,1082.45971930649,416.996477308795,40.5177615106616,12.1683651237524,98.2653679634017,1061.04647229059,500.303111916228,0,0.215714200818617,0.213455115606889,1.21251028578504,29.9583791118895,22.0744914130667,241.40889700767,101.284902370121,168.115396565411,232.828834197609,195.983876392547,539.664905436803,94.9875625247942,18.1967438687134,57.7075607267663,25.5415455202946,19.7316683089776,7.90230573527723,0.846016147141356,0,0,171.877228902416,205.580928679584,323.615056119859,0,0,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,1.08378575017541,5.51858751240339,0,0,0,0,0,0,21.3209519704809,92.7328424793264,194.953594037491,0,0,0.574265537996172,22.7521086112782,72.3077684298718,39.1516409083094,18.9479799051013,30.854238619952,2.75673144969061,204.09846524972,112.532954477441,14.2328467784889,474.00655778323,0,0.768760269460425,0,0,11.6211387324321,161.183921577288,9.0614845120878,2.46426864140871,1.59691809095107,4.34966496037536,2.22389062924704,0.429374660225974,70.7100901783368,44.6094988853404,60.8110318617001,147.397127795328,766.438727568752,19.4103981234821,0,207.932560966312,217.707864580691,125.823645705193,1.2130948894399,1.58510321173008,0.842516912477962,292.580243453754,2.19342140668156,4.22600587027022,144.416906269649,314.485680665057,23.731704490251,34.7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| ||
|short_description=p1@MFAP4 | |short_description=p1@MFAP4 | ||
}} | }} |
Latest revision as of 00:06, 19 September 2015
Short description: | p1@MFAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MFAP4_5end |
Coexpression cluster: | C1046_Hepatic_Fibroblast_neuroectodermal_Osteoblast_Pericytes_Mesenchymal_normal |
Association with transcript: | 0bp_to_uc002gvs.2, uc002gvt.2_5end |
EntrezGene: | MFAP4 |
HGNC: | 7035 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.65e-16 | 76 |
fat cell | 1.88e-07 | 15 |
skin fibroblast | 6.56e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.98e-12 | 114 |
ectoderm-derived structure | 4.40e-10 | 171 |
ectoderm | 4.40e-10 | 171 |
presumptive ectoderm | 4.40e-10 | 171 |
tissue | 4.64e-09 | 773 |
muscle tissue | 5.97e-08 | 64 |
musculature | 5.97e-08 | 64 |
musculature of body | 5.97e-08 | 64 |
dense mesenchyme tissue | 9.15e-08 | 73 |
structure with developmental contribution from neural crest | 1.16e-07 | 132 |
paraxial mesoderm | 2.47e-07 | 72 |
presumptive paraxial mesoderm | 2.47e-07 | 72 |
skeletal muscle tissue | 3.15e-07 | 62 |
striated muscle tissue | 3.15e-07 | 62 |
myotome | 3.15e-07 | 62 |
somite | 3.17e-07 | 71 |
presomitic mesoderm | 3.17e-07 | 71 |
presumptive segmental plate | 3.17e-07 | 71 |
dermomyotome | 3.17e-07 | 71 |
trunk paraxial mesoderm | 3.17e-07 | 71 |
surface structure | 4.78e-07 | 99 |
neurectoderm | 6.56e-07 | 86 |