FFCP PHASE1:Hg19::chr18:51751066..51751077,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:51751066..51751077,-
|short_description=p6@MBD2
|description=CAGE_peak_6_at_MBD2_5end
|association_with_transcript=80bp_to_ENST00000256429,ENST00000398398...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8932 | |EntrezGene=8932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6917 | |HGNC=6917 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBB5 | |UniProt=Q9UBB5 | ||
|association_with_transcript=80bp_to_ENST00000256429,ENST00000398398,NM_003927,NM_015832,uc002lfg.1,uc002lfh.1_5end | |||
|cluster_id=chr18:51751066..51751077,- | |||
|description=CAGE_peak_6_at_MBD2_5end | |||
|id=chr18:51751066..51751077,- | |||
|ontology_enrichment_celltype=CL:0000738!5.22e-33!140;CL:0002087!1.13e-31!119;CL:0002031!9.37e-27!124;CL:0002057!4.61e-23!42;CL:0000860!1.44e-22!45;CL:0000037!1.41e-21!172;CL:0000566!1.41e-21!172;CL:0002032!6.61e-21!165;CL:0000837!6.61e-21!165;CL:0000988!3.17e-20!182;CL:0000766!1.11e-19!76;CL:0002194!1.24e-19!63;CL:0000576!1.24e-19!63;CL:0000040!1.24e-19!63;CL:0000559!1.24e-19!63;CL:0002009!9.23e-19!65;CL:0000839!8.73e-17!70;CL:0000557!1.05e-15!71;CL:0000134!1.72e-15!358;CL:0002320!1.07e-14!365;CL:0000219!8.22e-12!390;CL:0000542!3.88e-11!53;CL:0000051!3.88e-11!53;CL:0000838!1.03e-10!52;CL:0000763!1.88e-10!112;CL:0000049!1.88e-10!112;CL:0000048!3.59e-10!430;CL:0000723!4.31e-10!436;CL:0000034!1.59e-09!444;CL:0000945!1.83e-07!24;CL:0000826!1.83e-07!24;CL:0002393!3.44e-07!9;CL:0002397!3.44e-07!9;CL:0000063!7.09e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.84e-24;33!CL:0002057;8.84e-24;33!CL:0000576;9.58e-22;48!CL:0000473;3.64e-19;39!CL:0000234;3.64e-19;39!CL:0000766;8.14e-16;69!CL:0002087;3.52e-13;104!CL:0000738;8.43e-10;136!CL:0000945;1.53e-08;24!CL:0002393;1.68e-07;6!CL:0002397;1.68e-07;6!CL:0000763;6.63e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.15e-40,136;CL:0000860,2.81e-37,42;CL:0002057,2.81e-37,42;CL:0002087,3.67e-37,115;CL:0000473,1.06e-35,48;CL:0000234,1.06e-35,48;CL:0002031,7.17e-33,120;CL:0000766,7.67e-32,72;CL:0002194,2.49e-29,59;CL:0000576,2.49e-29,59;CL:0000040,2.49e-29,59;CL:0000559,2.49e-29,59;CL:0002032,8.55e-29,161;CL:0000837,8.55e-29,161;CL:0000037,2.74e-28,168;CL:0000988,7.41e-28,177;CL:0002009,8.36e-28,61;CL:0000839,7.76e-27,66;CL:0000557,6.99e-25,67;CL:0000763,3.40e-19,108;CL:0000049,3.40e-19,108;CL:0000134,1.34e-15,354;CL:0002320,1.35e-14,361;CL:0000219,1.52e-11,386;CL:0002393,3.05e-11,9;CL:0002397,3.05e-11,9;CL:0000542,4.37e-09,53;CL:0000051,4.37e-09,53;CL:0000723,6.20e-09,433;CL:0000048,7.74e-09,427;CL:0000945,1.06e-08,24;CL:0000826,1.06e-08,24;CL:0000838,1.58e-08,52;CL:0000034,1.76e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.30e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.02e-18!102;UBERON:0003061!5.02e-18!102;UBERON:0002193!2.82e-17!112;UBERON:0002371!4.53e-14!80;UBERON:0002384!1.59e-13!375;UBERON:0001474!2.73e-12!86;UBERON:0002405!3.15e-12!115;UBERON:0004765!5.63e-11!101;UBERON:0001434!5.63e-11!101;UBERON:0003081!8.42e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.57e-08;9!UBERON:0001557;2.57e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-25,98;UBERON:0003061,1.28e-25,98;UBERON:0002193,3.76e-24,108;UBERON:0002405,6.84e-22,93;UBERON:0002371,3.66e-21,76;UBERON:0001474,2.16e-18,82;UBERON:0004765,2.54e-15,90;UBERON:0002384,2.87e-14,371;UBERON:0001434,6.60e-13,100;UBERON:0001737,2.30e-09,9;UBERON:0003081,2.53e-09,203;UBERON:0001557,1.16e-08,19 | |||
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| ||
|short_description=p6@MBD2 | |||
}} | }} |
Latest revision as of 19:42, 19 September 2015
Short description: | p6@MBD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MBD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENST00000256429, ENST00000398398, NM_003927, NM_015832, uc002lfg.1, uc002lfh.1_5end |
EntrezGene: | MBD2 |
HGNC: | 6917 |
UniProt: | Q9UBB5 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-25 | 98 |
blood island | 1.28e-25 | 98 |
hemolymphoid system | 3.76e-24 | 108 |
immune system | 6.84e-22 | 93 |
bone marrow | 3.66e-21 | 76 |
bone element | 2.16e-18 | 82 |
skeletal element | 2.54e-15 | 90 |
connective tissue | 2.87e-14 | 371 |
skeletal system | 6.60e-13 | 100 |
larynx | 2.30e-09 | 9 |
lateral plate mesoderm | 2.53e-09 | 203 |
upper respiratory tract | 1.16e-08 | 19 |