FFCP PHASE1:Hg19::chr17:4463856..4463896,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124975 | |EntrezGene=124975 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26891 | |HGNC=26891 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P531,Q6ZPD7 | |UniProt=Q6P531,Q6ZPD7 | ||
|association_with_transcript=0bp_to_ENST00000301395,ENST00000381550,NM_001122890,NM_153338,uc002fyc.3,uc002fyd.3,uc010vsc.1_5end | |association_with_transcript=0bp_to_ENST00000301395,ENST00000381550,NM_001122890,NM_153338,uc002fyc.3,uc002fyd.3,uc010vsc.1_5end | ||
|cluster_id=chr17:4463856..4463896,- | |||
|coexpression_cluster_id=C435 | |coexpression_cluster_id=C435 | ||
|description=CAGE_peak_1_at_GGT6_5end | |description=CAGE_peak_1_at_GGT6_5end | ||
|id=chr17:4463856..4463896,- | |id=chr17:4463856..4463896,- | ||
|ontology_enrichment_celltype=CL:0002076!1.25e-15!43;CL:0000223!1.83e-10!59;CL:0002251!5.17e-08!21;CL:0002159!4.40e-07!13;CL:0000066!7.31e-07!254;CL:0000622!8.20e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.25e-15!43;CL:0000223!1.83e-10!59;CL:0002251!5.17e-08!21;CL:0002159!4.40e-07!13;CL:0000066!7.31e-07!254;CL:0000622!8.20e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.91e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.13e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.46e-21!169;UBERON:0000925!9.46e-21!169;UBERON:0006595!9.46e-21!169;UBERON:0001007!3.63e-16!155;UBERON:0001555!3.63e-16!155;UBERON:0007026!3.63e-16!155;UBERON:0004921!1.30e-13!129;UBERON:0004185!1.30e-13!129;UBERON:0001004!2.21e-12!72;UBERON:0000166!4.53e-11!21;UBERON:0007023!5.75e-11!115;UBERON:0000161!8.70e-11!35;UBERON:0000077!5.07e-10!130;UBERON:0000464!6.34e-10!104;UBERON:0001044!1.98e-09!6;UBERON:0003293!1.98e-09!6;UBERON:0003294!1.98e-09!6;UBERON:0010047!1.98e-09!6;UBERON:0000167!1.98e-09!6;UBERON:0003408!1.32e-08!10;UBERON:0000165!1.58e-08!28;UBERON:0000930!1.58e-08!28;UBERON:0001041!1.09e-07!98;UBERON:0000062!1.58e-07!511;UBERON:0000466!1.61e-07!126;UBERON:0000065!3.42e-07!53;UBERON:0005409!5.43e-07!35;UBERON:0000078!5.98e-07!18 | |ontology_enrichment_uberon=UBERON:0004119!9.46e-21!169;UBERON:0000925!9.46e-21!169;UBERON:0006595!9.46e-21!169;UBERON:0001007!3.63e-16!155;UBERON:0001555!3.63e-16!155;UBERON:0007026!3.63e-16!155;UBERON:0004921!1.30e-13!129;UBERON:0004185!1.30e-13!129;UBERON:0001004!2.21e-12!72;UBERON:0000166!4.53e-11!21;UBERON:0007023!5.75e-11!115;UBERON:0000161!8.70e-11!35;UBERON:0000077!5.07e-10!130;UBERON:0000464!6.34e-10!104;UBERON:0001044!1.98e-09!6;UBERON:0003293!1.98e-09!6;UBERON:0003294!1.98e-09!6;UBERON:0010047!1.98e-09!6;UBERON:0000167!1.98e-09!6;UBERON:0003408!1.32e-08!10;UBERON:0000165!1.58e-08!28;UBERON:0000930!1.58e-08!28;UBERON:0001041!1.09e-07!98;UBERON:0000062!1.58e-07!511;UBERON:0000466!1.61e-07!126;UBERON:0000065!3.42e-07!53;UBERON:0005409!5.43e-07!35;UBERON:0000078!5.98e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.99e-14;33!UBERON:0001555;9.26e-10;54!UBERON:0001041;1.21e-07;14!UBERON:0000165;2.66e-07;28!UBERON:0000160;4.21e-07;17!UBERON:0001044;5.81e-07;6!UBERON:0003293;5.81e-07;6!UBERON:0003294;5.81e-07;6!UBERON:0010047;5.81e-07;6!UBERON:0003408;5.81e-07;6!UBERON:0000167;5.81e-07;6!UBERON:0006947;5.95e-07;3!UBERON:0004054;5.95e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.71e-13,160;UBERON:0000925,2.71e-13,160;UBERON:0006595,2.71e-13,160;UBERON:0001007,2.36e-11,145;UBERON:0001555,2.36e-11,145;UBERON:0007026,2.36e-11,145;UBERON:0000161,4.04e-10,36;UBERON:0004921,1.01e-09,118;UBERON:0007023,1.74e-09,114;UBERON:0000166,2.21e-08,22;UBERON:0000160,4.52e-07,17;UBERON:0000165,5.64e-07,29;UBERON:0000930,5.64e-07,29;UBERON:0001044,5.77e-07,6;UBERON:0003293,5.77e-07,6;UBERON:0003294,5.77e-07,6;UBERON:0010047,5.77e-07,6;UBERON:0000167,5.77e-07,6;UBERON:0006947,6.34e-07,3;UBERON:0004054,6.34e-07,3 | |||
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| ||
|short_description=p1@GGT6 | |short_description=p1@GGT6 | ||
}} | }} |
Latest revision as of 03:03, 25 September 2015
Short description: | p1@GGT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GGT6_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | 0bp_to_ENST00000301395, ENST00000381550, NM_001122890, NM_153338, uc002fyc.3, uc002fyd.3, uc010vsc.1_5end |
EntrezGene: | GGT6 |
HGNC: | 26891 |
UniProt: | Q6P531Q6ZPD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.13e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.71e-13 | 160 |
endoderm | 2.71e-13 | 160 |
presumptive endoderm | 2.71e-13 | 160 |
digestive system | 2.36e-11 | 145 |
digestive tract | 2.36e-11 | 145 |
primitive gut | 2.36e-11 | 145 |
orifice | 4.04e-10 | 36 |
subdivision of digestive tract | 1.01e-09 | 118 |
adult organism | 1.74e-09 | 114 |
oral opening | 2.21e-08 | 22 |
intestine | 4.52e-07 | 17 |
mouth | 5.64e-07 | 29 |
stomodeum | 5.64e-07 | 29 |
saliva-secreting gland | 5.77e-07 | 6 |
gland of oral region | 5.77e-07 | 6 |
gland of foregut | 5.77e-07 | 6 |
oral gland | 5.77e-07 | 6 |
oral cavity | 5.77e-07 | 6 |
male genital duct | 6.34e-07 | 3 |
internal male genitalia | 6.34e-07 | 3 |