FFCP PHASE1:Hg19::chr19:18391292..18391321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=119bp_to_BC169275_5end | |association_with_transcript=119bp_to_BC169275_5end | ||
|cluster_id=chr19:18391292..18391321,- | |||
|coexpression_cluster_id=C922 | |coexpression_cluster_id=C922 | ||
|description=CAGE_peak_2_at_BC169275_5end | |description=CAGE_peak_2_at_BC169275_5end | ||
|id=chr19:18391292..18391321,- | |id=chr19:18391292..18391321,- | ||
|ontology_enrichment_celltype=CL:0000738!1.58e-16!140;CL:0000037!4.45e-15!172;CL:0000566!4.45e-15!172;CL:0000988!2.32e-14!182;CL:0002032!4.41e-14!165;CL:0000837!4.41e-14!165;CL:0000766!1.53e-13!76;CL:0000763!1.52e-12!112;CL:0000049!1.52e-12!112;CL:0002057!1.36e-11!42;CL:0000557!2.44e-11!71;CL:0002031!3.25e-11!124;CL:0002087!1.94e-10!119;CL:0000860!3.93e-10!45;CL:0000839!1.67e-09!70;CL:0002009!5.06e-09!65;CL:0002194!3.24e-08!63;CL:0000576!3.24e-08!63;CL:0000040!3.24e-08!63;CL:0000559!3.24e-08!63 | |ontology_enrichment_celltype=CL:0000738!1.58e-16!140;CL:0000037!4.45e-15!172;CL:0000566!4.45e-15!172;CL:0000988!2.32e-14!182;CL:0002032!4.41e-14!165;CL:0000837!4.41e-14!165;CL:0000766!1.53e-13!76;CL:0000763!1.52e-12!112;CL:0000049!1.52e-12!112;CL:0002057!1.36e-11!42;CL:0000557!2.44e-11!71;CL:0002031!3.25e-11!124;CL:0002087!1.94e-10!119;CL:0000860!3.93e-10!45;CL:0000839!1.67e-09!70;CL:0002009!5.06e-09!65;CL:0002194!3.24e-08!63;CL:0000576!3.24e-08!63;CL:0000040!3.24e-08!63;CL:0000559!3.24e-08!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.52e-09;33!CL:0002057;7.52e-09;33!CL:0000094;1.04e-08;8!CL:0000624;8.86e-08;6!CL:0000766;2.85e-07;69!CL:0000081;5.26e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.22e-25,136;CL:0000988,1.41e-21,177;CL:0000037,2.26e-21,168;CL:0002032,4.98e-19,161;CL:0000837,4.98e-19,161;CL:0002031,2.77e-16,120;CL:0000766,5.51e-16,72;CL:0002087,5.08e-15,115;CL:0000763,8.87e-14,108;CL:0000049,8.87e-14,108;CL:0000557,1.06e-12,67;CL:0000860,3.92e-11,42;CL:0002057,3.92e-11,42;CL:0000473,1.73e-10,48;CL:0000234,1.73e-10,48;CL:0000839,3.56e-10,66;CL:0002009,7.28e-10,61;CL:0000094,7.49e-09,8;CL:0002194,1.06e-08,59;CL:0000576,1.06e-08,59;CL:0000040,1.06e-08,59;CL:0000559,1.06e-08,59;CL:0000624,1.17e-07,6;CL:0000134,2.14e-07,354;CL:0000081,3.36e-07,11;CL:0002320,4.49e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.52e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.87e-10!80;UBERON:0002390!5.70e-10!102;UBERON:0003061!5.70e-10!102;UBERON:0001474!7.69e-10!86;UBERON:0002193!1.99e-08!112;UBERON:0002405!2.54e-08!115;UBERON:0004765!9.41e-07!101;UBERON:0001434!9.41e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!4.87e-10!80;UBERON:0002390!5.70e-10!102;UBERON:0003061!5.70e-10!102;UBERON:0001474!7.69e-10!86;UBERON:0002193!1.99e-08!112;UBERON:0002405!2.54e-08!115;UBERON:0004765!9.41e-07!101;UBERON:0001434!9.41e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.39e-12,98;UBERON:0003061,3.39e-12,98;UBERON:0001474,5.25e-12,82;UBERON:0002371,8.64e-12,76;UBERON:0004765,1.97e-10,90;UBERON:0002193,1.04e-09,108;UBERON:0002405,1.20e-08,93;UBERON:0001434,1.42e-08,100;UBERON:0002384,5.73e-08,371 | |||
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| ||
|short_description=p2@BC169275 | |short_description=p2@BC169275 | ||
}} | }} |
Latest revision as of 05:07, 26 July 2015
Short description: | p2@BC169275 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC169275_5end |
Coexpression cluster: | C922_Mast_Eosinophils_mature_Basophils_CD19_CD4_Natural |
Association with transcript: | 119bp_to_BC169275_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.22e-25 | 136 |
hematopoietic cell | 1.41e-21 | 177 |
hematopoietic stem cell | 2.26e-21 | 168 |
hematopoietic oligopotent progenitor cell | 4.98e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.98e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 2.77e-16 | 120 |
myeloid leukocyte | 5.51e-16 | 72 |
nongranular leukocyte | 5.08e-15 | 115 |
myeloid cell | 8.87e-14 | 108 |
common myeloid progenitor | 8.87e-14 | 108 |
granulocyte monocyte progenitor cell | 1.06e-12 | 67 |
classical monocyte | 3.92e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-11 | 42 |
defensive cell | 1.73e-10 | 48 |
phagocyte | 1.73e-10 | 48 |
myeloid lineage restricted progenitor cell | 3.56e-10 | 66 |
macrophage dendritic cell progenitor | 7.28e-10 | 61 |
granulocyte | 7.49e-09 | 8 |
monopoietic cell | 1.06e-08 | 59 |
monocyte | 1.06e-08 | 59 |
monoblast | 1.06e-08 | 59 |
promonocyte | 1.06e-08 | 59 |
CD4-positive, alpha-beta T cell | 1.17e-07 | 6 |
mesenchymal cell | 2.14e-07 | 354 |
blood cell | 3.36e-07 | 11 |
connective tissue cell | 4.49e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.39e-12 | 98 |
blood island | 3.39e-12 | 98 |
bone element | 5.25e-12 | 82 |
bone marrow | 8.64e-12 | 76 |
skeletal element | 1.97e-10 | 90 |
hemolymphoid system | 1.04e-09 | 108 |
immune system | 1.20e-08 | 93 |
skeletal system | 1.42e-08 | 100 |
connective tissue | 5.73e-08 | 371 |