FFCP PHASE1:Hg19::chr1:156828879..156828914,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3645 | |EntrezGene=3645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6093 | |HGNC=6093 | ||
|TSSclassifier=strong | |||
|UniProt=P14616 | |UniProt=P14616 | ||
|association_with_transcript=-69bp_to_ENST00000368195_5end | |association_with_transcript=-69bp_to_ENST00000368195_5end | ||
|cluster_id=chr1:156828879..156828914,- | |||
|coexpression_cluster_id=C101 | |coexpression_cluster_id=C101 | ||
|description=CAGE_peak_1_at_INSRR_5end | |description=CAGE_peak_1_at_INSRR_5end | ||
|id=chr1:156828879..156828914,- | |id=chr1:156828879..156828914,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002549;2.23e-14;2!CL:0002575;4.77e-14;2!CL:0000669;1.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,2.46e-14,2;CL:0002575,3.21e-14,2;CL:0000669,1.54e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.89e-08;1!UBERON:0005425;1.26e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;7.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.07e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-23!94;UBERON:0001016!1.72e-23!94;UBERON:0002616!3.48e-23!59;UBERON:0007023!3.75e-23!115;UBERON:0000955!6.35e-22!69;UBERON:0006238!6.35e-22!69;UBERON:0001017!9.63e-22!82;UBERON:0005743!1.75e-21!86;UBERON:0001049!8.74e-21!57;UBERON:0005068!8.74e-21!57;UBERON:0006241!8.74e-21!57;UBERON:0007135!8.74e-21!57;UBERON:0003075!1.05e-14!86;UBERON:0007284!1.05e-14!86;UBERON:0002346!1.40e-14!90;UBERON:0002780!2.88e-14!41;UBERON:0001890!2.88e-14!41;UBERON:0006240!2.88e-14!41;UBERON:0003080!8.96e-14!42;UBERON:0000153!3.05e-13!129;UBERON:0007811!3.05e-13!129;UBERON:0002020!4.27e-13!34;UBERON:0003528!4.27e-13!34;UBERON:0000033!5.33e-13!123;UBERON:0000924!7.72e-13!173;UBERON:0006601!7.72e-13!173;UBERON:0004121!9.30e-13!169;UBERON:0002308!3.05e-12!9;UBERON:0000125!3.05e-12!9;UBERON:0001893!8.58e-12!34;UBERON:0001869!2.12e-11!32;UBERON:0002791!6.42e-11!33;UBERON:0004732!2.36e-10!13;UBERON:0009663!3.55e-10!7;UBERON:0002298!4.29e-09!8;UBERON:0004733!5.27e-09!12;UBERON:0002028!5.27e-09!12;UBERON:0007277!5.27e-09!12;UBERON:0003076!1.69e-08!15;UBERON:0003057!1.69e-08!15;UBERON:0003056!1.70e-08!61;UBERON:0002420!1.25e-07!9;UBERON:0007245!1.25e-07!9;UBERON:0010009!1.25e-07!9;UBERON:0010011!1.25e-07!9;UBERON:0000454!1.25e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!1.72e-23!94;UBERON:0001016!1.72e-23!94;UBERON:0002616!3.48e-23!59;UBERON:0007023!3.75e-23!115;UBERON:0000955!6.35e-22!69;UBERON:0006238!6.35e-22!69;UBERON:0001017!9.63e-22!82;UBERON:0005743!1.75e-21!86;UBERON:0001049!8.74e-21!57;UBERON:0005068!8.74e-21!57;UBERON:0006241!8.74e-21!57;UBERON:0007135!8.74e-21!57;UBERON:0003075!1.05e-14!86;UBERON:0007284!1.05e-14!86;UBERON:0002346!1.40e-14!90;UBERON:0002780!2.88e-14!41;UBERON:0001890!2.88e-14!41;UBERON:0006240!2.88e-14!41;UBERON:0003080!8.96e-14!42;UBERON:0000153!3.05e-13!129;UBERON:0007811!3.05e-13!129;UBERON:0002020!4.27e-13!34;UBERON:0003528!4.27e-13!34;UBERON:0000033!5.33e-13!123;UBERON:0000924!7.72e-13!173;UBERON:0006601!7.72e-13!173;UBERON:0004121!9.30e-13!169;UBERON:0002308!3.05e-12!9;UBERON:0000125!3.05e-12!9;UBERON:0001893!8.58e-12!34;UBERON:0001869!2.12e-11!32;UBERON:0002791!6.42e-11!33;UBERON:0004732!2.36e-10!13;UBERON:0009663!3.55e-10!7;UBERON:0002298!4.29e-09!8;UBERON:0004733!5.27e-09!12;UBERON:0002028!5.27e-09!12;UBERON:0007277!5.27e-09!12;UBERON:0003076!1.69e-08!15;UBERON:0003057!1.69e-08!15;UBERON:0003056!1.70e-08!61;UBERON:0002420!1.25e-07!9;UBERON:0007245!1.25e-07!9;UBERON:0010009!1.25e-07!9;UBERON:0010011!1.25e-07!9;UBERON:0000454!1.25e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.23e-14;2!UBERON:0005358;2.23e-14;2!UBERON:0001886;2.23e-14;2!UBERON:0004086;2.23e-14;2!UBERON:0005282;2.23e-14;2!UBERON:0005281;2.23e-14;2!UBERON:0001905;6.83e-14;2!UBERON:0002757;6.83e-14;2!UBERON:0010134;6.83e-14;2!UBERON:0005408;6.83e-14;2!UBERON:0001899;6.83e-14;2!UBERON:0000941;1.26e-07;1!UBERON:0001785;1.26e-07;1!UBERON:0002464;1.26e-07;1!UBERON:0004904;1.26e-07;1!UBERON:0002426;1.26e-07;1!UBERON:0003831;1.26e-07;1!UBERON:0003898;1.26e-07;1!UBERON:0004830;1.26e-07;1!UBERON:0001021;1.26e-07;1!UBERON:0003830;1.26e-07;1!UBERON:0005175;1.26e-07;1!UBERON:0001774;1.26e-07;1!UBERON:0001103;1.26e-07;1!UBERON:0003296;2.23e-07;4!UBERON:0010133;2.23e-07;4!UBERON:0002784;2.23e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.46e-14,2;UBERON:0005358,2.46e-14,2;UBERON:0001886,2.46e-14,2;UBERON:0004086,2.46e-14,2;UBERON:0005282,2.46e-14,2;UBERON:0005281,2.46e-14,2;UBERON:0001905,5.10e-14,2;UBERON:0002757,5.10e-14,2;UBERON:0010134,5.10e-14,2;UBERON:0005408,5.10e-14,2;UBERON:0001899,5.10e-14,2;UBERON:0002426,1.11e-07,1;UBERON:0003831,1.11e-07,1;UBERON:0003898,1.11e-07,1;UBERON:0004830,1.11e-07,1;UBERON:0003830,1.11e-07,1;UBERON:0005175,1.11e-07,1;UBERON:0001774,1.11e-07,1;UBERON:0001103,1.11e-07,1;UBERON:0010084,1.11e-07,1;UBERON:0000941,1.35e-07,1;UBERON:0001785,1.35e-07,1;UBERON:0002464,1.35e-07,1;UBERON:0004904,1.35e-07,1;UBERON:0001021,1.35e-07,1;UBERON:0003902,1.35e-07,1;UBERON:0005425,1.35e-07,1;UBERON:0003296,1.93e-07,4;UBERON:0010133,1.93e-07,4;UBERON:0002784,1.93e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,3.02714855289863,2.30470369792,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20378439891088,2.27407504055985,0,0,0,0,3.72022199179207,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,3.10269035917318,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.331737779793674,0.295547618953547,1.53569778007781,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0.91821828489147,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,13.7275998289572,0,0,0,0,0,0,0,2.40168115483916,0.684526894459965,0,0,0,0.558564802544508,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,2.04894838977915,2.6751839948849,0,0.537862017998534,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0,1.14681839138014,0.554645257684261,0.558867626472451,0.138348634936231,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.511577485214607,14.0172254815686,0,0.655257829152084,0.33946505990805,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.756215088665154,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0,0.253663240775627,0.546974809018219,0,0,0,0,1.60710550763486,2.35398605553177,0,0.682986574053893,0.0887023701626388,0,0,1.69924332442079,0.197318320688547,0,0,0.706437835654626,0.157115589916002,0,0,0,0,0.643288897589907,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,25.0677976703324,0,0,0.109940516745429,1.05673990496671,0,0,1.88126918544609,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,4.3820183294791,0.458729283404541,0.286679166302903,0.157771562193185,0.339957450954573,2.18175345170189,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,14.6970261173267,0,0,0.0918948995348449,0,0.227336094654718,0.535928260312357,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0.0814032686109745,0,1.9307228228694,0,2.34640942403454,0.855690109280065,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,3.02714855289863,2.30470369792,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20378439891088,2.27407504055985,0,0,0,0,3.72022199179207,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,3.10269035917318,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.331737779793674,0.295547618953547,1.53569778007781,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0.91821828489147,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,13.7275998289572,0,0,0,0,0,0,0,2.40168115483916,0.684526894459965,0,0,0,0.558564802544508,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,2.04894838977915,2.6751839948849,0,0.537862017998534,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0,1.14681839138014,0.554645257684261,0.558867626472451,0.138348634936231,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.511577485214607,14.0172254815686,0,0.655257829152084,0.33946505990805,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.756215088665154,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0,0.253663240775627,0.546974809018219,0,0,0,0,1.60710550763486,2.35398605553177,0,0.682986574053893,0.0887023701626388,0,0,1.69924332442079,0.197318320688547,0,0,0.706437835654626,0.157115589916002,0,0,0,0,0.643288897589907,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,25.0677976703324,0,0,0.109940516745429,1.05673990496671,0,0,1.88126918544609,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,4.3820183294791,0.458729283404541,0.286679166302903,0.157771562193185,0.339957450954573,2.18175345170189,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,14.6970261173267,0,0,0.0918948995348449,0,0.227336094654718,0.535928260312357,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0.0814032686109745,0,1.9307228228694,0,2.34640942403454,0.855690109280065,0,0,0.201273793591026,0 | ||
|short_description=p1@INSRR | |short_description=p1@INSRR | ||
}} | }} |
Latest revision as of 18:28, 17 September 2015
Short description: | p1@INSRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_INSRR_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | -69bp_to_ENST00000368195_5end |
EntrezGene: | INSRR |
HGNC: | 6093 |
UniProt: | P14616 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 2.46e-14 | 2 |
central nervous system pericyte | 3.21e-14 | 2 |
pericyte cell | 1.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.46e-14 | 2 |
ventricle of nervous system | 2.46e-14 | 2 |
choroid plexus | 2.46e-14 | 2 |
brain ventricle | 2.46e-14 | 2 |
ventricular system of brain | 2.46e-14 | 2 |
ventricular system of central nervous system | 2.46e-14 | 2 |
pineal body | 5.10e-14 | 2 |
regional part of epithalamus | 5.10e-14 | 2 |
secretory circumventricular organ | 5.10e-14 | 2 |
circumventricular organ | 5.10e-14 | 2 |
epithalamus | 5.10e-14 | 2 |
chest muscle | 1.11e-07 | 1 |
respiratory system muscle | 1.11e-07 | 1 |
skeletal muscle of trunk | 1.11e-07 | 1 |
respiratory system skeletal muscle | 1.11e-07 | 1 |
thoracic segment muscle | 1.11e-07 | 1 |
chest organ | 1.11e-07 | 1 |
muscle of trunk | 1.11e-07 | 1 |
diaphragm | 1.11e-07 | 1 |
future diaphragm | 1.11e-07 | 1 |
cranial nerve II | 1.35e-07 | 1 |
cranial nerve | 1.35e-07 | 1 |
nerve trunk | 1.35e-07 | 1 |
nerve connecting eye with brain | 1.35e-07 | 1 |
nerve | 1.35e-07 | 1 |
retinal neural layer | 1.35e-07 | 1 |
presumptive neural retina | 1.35e-07 | 1 |
gland of diencephalon | 1.93e-07 | 4 |
neuroendocrine gland | 1.93e-07 | 4 |
regional part of diencephalon | 1.93e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.07e-08 | 14 |