FFCP PHASE1:Hg19::chr1:214160884..214160892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:214160884..214160892,- | |||
|coexpression_cluster_id=C931 | |coexpression_cluster_id=C931 | ||
|description=CAGE_peak_at_chr1:214160884..214160892,- | |description=CAGE_peak_at_chr1:214160884..214160892,- | ||
|id=chr1:214160884..214160892,- | |id=chr1:214160884..214160892,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002144;7.25e-08;3!CL:0000182;1.44e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,7.76e-08,3;CL:0000182,1.57e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.54e-21;1!UBERON:0003056;5.36e-08;3 | |||
|ontology_enrichment_disease=DOID:171!6.70e-07!10 | |ontology_enrichment_disease=DOID:171!6.70e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;5.04e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.36e-09,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;2.54e-21;1!UBERON:0001785;2.54e-21;1!UBERON:0002464;2.54e-21;1!UBERON:0004904;2.54e-21;1!UBERON:0001021;2.54e-21;1!UBERON:0002346;4.45e-21;4!UBERON:0000923;4.45e-21;4!UBERON:0010316;4.45e-21;4!UBERON:0005291;4.45e-21;4!UBERON:0002134;6.31e-21;1!UBERON:0005208;6.31e-21;1!UBERON:0004145;6.31e-21;1!UBERON:0005946;6.31e-21;1!UBERON:0005965;6.31e-21;1!UBERON:0002078;6.31e-21;1!UBERON:0002050;4.46e-17;5!UBERON:0005423;4.46e-17;5!UBERON:0003714;2.35e-11;2!UBERON:0005162;2.35e-11;2!UBERON:0000122;2.35e-11;2!UBERON:0002081;3.70e-11;2!UBERON:0002133;3.70e-11;2!UBERON:0003978;7.25e-08;3!UBERON:0010523;7.25e-08;3!UBERON:0004151;7.25e-08;3!UBERON:0000946;7.25e-08;3!UBERON:0001915;7.25e-08;3!UBERON:0001982;7.25e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.30e-21,1;UBERON:0001785,2.30e-21,1;UBERON:0002464,2.30e-21,1;UBERON:0004904,2.30e-21,1;UBERON:0001021,2.30e-21,1;UBERON:0003902,2.30e-21,1;UBERON:0005425,2.30e-21,1;UBERON:0002134,5.16e-21,1;UBERON:0005208,5.16e-21,1;UBERON:0005946,5.16e-21,1;UBERON:0005965,5.16e-21,1;UBERON:0002078,5.16e-21,1;UBERON:0003714,2.23e-11,2;UBERON:0005162,2.23e-11,2;UBERON:0000122,2.23e-11,2;UBERON:0002081,3.35e-11,2;UBERON:0002133,3.35e-11,2;UBERON:0010227,3.35e-11,2;UBERON:0003978,6.78e-08,3;UBERON:0009751,6.78e-08,3;UBERON:0004151,6.78e-08,3;UBERON:0000946,6.78e-08,3;UBERON:0002523,6.78e-08,3;UBERON:0005983,6.78e-08,3;UBERON:0004145,6.78e-08,3;UBERON:0002165,6.78e-08,3;UBERON:0002062,6.78e-08,3;UBERON:0007280,6.78e-08,3;UBERON:0010523,7.76e-08,3;UBERON:0001915,7.76e-08,3;UBERON:0001982,7.76e-08,3 | |||
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| ||
|short_description=p@chr1:214160884..214160892,- | |short_description=p@chr1:214160884..214160892,- | ||
}} | }} |
Latest revision as of 03:44, 28 July 2015
Short description: | p@chr1:214160884..214160892, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:214160884..214160892, - |
Coexpression cluster: | C931_neuroectodermal_peripheral_maxillary_gastrointestinal_Hepatocyte_small_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 7.76e-08 | 3 |
hepatocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.30e-21 | 1 |
cranial nerve | 2.30e-21 | 1 |
nerve trunk | 2.30e-21 | 1 |
nerve connecting eye with brain | 2.30e-21 | 1 |
nerve | 2.30e-21 | 1 |
retinal neural layer | 2.30e-21 | 1 |
presumptive neural retina | 2.30e-21 | 1 |
tricuspid valve | 5.16e-21 | 1 |
right atrium valve | 5.16e-21 | 1 |
outflow tract of atrium | 5.16e-21 | 1 |
outflow part of right atrium | 5.16e-21 | 1 |
right cardiac atrium | 5.16e-21 | 1 |
neural tissue | 2.23e-11 | 2 |
multi cell component structure | 2.23e-11 | 2 |
neuron projection bundle | 2.23e-11 | 2 |
cardiac atrium | 3.35e-11 | 2 |
atrioventricular valve | 3.35e-11 | 2 |
future cardiac atrium | 3.35e-11 | 2 |
valve | 6.78e-08 | 3 |
cardiac mesenchyme | 6.78e-08 | 3 |
cardiac chamber | 6.78e-08 | 3 |
cardial valve | 6.78e-08 | 3 |
tunica intima | 6.78e-08 | 3 |
heart layer | 6.78e-08 | 3 |
outflow tract | 6.78e-08 | 3 |
endocardium | 6.78e-08 | 3 |
endocardial cushion | 6.78e-08 | 3 |
presumptive endocardium | 6.78e-08 | 3 |
microcirculatory vessel | 7.76e-08 | 3 |
endothelium of capillary | 7.76e-08 | 3 |
capillary | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.36e-09 | 10 |