FFCP PHASE1:Hg19::chr1:236046834..236046841,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=30bp_to_ENST00000536965_5end | |association_with_transcript=30bp_to_ENST00000536965_5end | ||
|cluster_id=chr1:236046834..236046841,- | |||
|coexpression_cluster_id=C610 | |coexpression_cluster_id=C610 | ||
|description=CAGE_peak_22_at_LYST_5end | |description=CAGE_peak_22_at_LYST_5end | ||
|id=chr1:236046834..236046841,- | |id=chr1:236046834..236046841,- | ||
|ontology_enrichment_celltype=CL:0000148!2.91e-33!10;CL:0000541!2.91e-33!10;CL:0000147!1.15e-23!14;CL:0000710!1.90e-16!20;CL:0002567!1.60e-13!3;CL:0000075!4.53e-12!27;CL:0002566!1.19e-10!1;CL:0002077!8.64e-10!33;CL:0000325!3.29e-08!39;CL:0000333!2.13e-07!41 | |ontology_enrichment_celltype=CL:0000148!2.91e-33!10;CL:0000541!2.91e-33!10;CL:0000147!1.15e-23!14;CL:0000710!1.90e-16!20;CL:0002567!1.60e-13!3;CL:0000075!4.53e-12!27;CL:0002566!1.19e-10!1;CL:0002077!8.64e-10!33;CL:0000325!3.29e-08!39;CL:0000333!2.13e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.10e-100;10!CL:0000147;4.07e-72;14!CL:0000710;1.14e-50;20!CL:0002567;1.64e-38;3!CL:0000075;1.13e-37;27!CL:0002566;3.16e-29;1!CL:0002077;4.75e-28;34!CL:0000149;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.20e-100,10;CL:0000541,1.20e-100,10;CL:0000147,4.33e-72,14;CL:0000710,1.20e-50,20;CL:0002567,1.80e-38,3;CL:0000075,1.17e-37,27;CL:0002077,5.25e-30,34;CL:0002566,4.20e-29,1;CL:0000333,8.13e-24,41;CL:0000133,6.77e-17,59;CL:0000221,5.58e-14,72;CL:0000149,2.26e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.66e-09;59!CL:0000221;7.25e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!1.24e-19!2;DOID:6193!2.74e-10!1;DOID:5662!3.01e-10!1 | |ontology_enrichment_disease=DOID:1909!1.24e-19!2;DOID:6193!2.74e-10!1;DOID:5662!3.01e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.24e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.15e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000029!1.30e-10!1;UBERON:0007029!1.43e-10!1 | |ontology_enrichment_uberon=UBERON:0000029!1.30e-10!1;UBERON:0007029!1.43e-10!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p22@LYST | |short_description=p22@LYST | ||
}} | }} |
Latest revision as of 13:24, 16 September 2015
Short description: | p22@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 30bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.20e-100 | 10 |
melanoblast | 1.20e-100 | 10 |
pigment cell | 4.33e-72 | 14 |
neurecto-epithelial cell | 1.20e-50 | 20 |
light melanocyte | 1.80e-38 | 3 |
columnar/cuboidal epithelial cell | 1.17e-37 | 27 |
ecto-epithelial cell | 5.25e-30 | 34 |
dark melanocyte | 4.20e-29 | 1 |
migratory neural crest cell | 8.13e-24 | 41 |
neurectodermal cell | 6.77e-17 | 59 |
ectodermal cell | 5.58e-14 | 72 |
visual pigment cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.15e-15 | 2 |