FFCP PHASE1:Hg19::chr21:20741173..20741184,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:20741173..20741184,- | |||
|coexpression_cluster_id=C156 | |coexpression_cluster_id=C156 | ||
|description=CAGE_peak_at_chr21:20741173..20741184,- | |description=CAGE_peak_at_chr21:20741173..20741184,- | ||
|id=chr21:20741173..20741184,- | |id=chr21:20741173..20741184,- | ||
|ontology_enrichment_celltype=CL:0000946!2.16e-26!1;CL:0000786!2.16e-26!1;CL:0000980!2.16e-26!1;CL:0000838!2.90e-17!52;CL:0000945!4.81e-17!24;CL:0000826!4.81e-17!24;CL:0000542!6.09e-17!53;CL:0000051!6.09e-17!53;CL:0000785!6.43e-14!2;CL:0000955!6.43e-14!2;CL:0000818!6.43e-14!2;CL:0000954!6.43e-14!2;CL:0000816!6.43e-14!2;CL:0000817!1.01e-09!3;CL:0002087!1.59e-07!119;CL:0002031!3.19e-07!124 | |ontology_enrichment_celltype=CL:0000946!2.16e-26!1;CL:0000786!2.16e-26!1;CL:0000980!2.16e-26!1;CL:0000838!2.90e-17!52;CL:0000945!4.81e-17!24;CL:0000826!4.81e-17!24;CL:0000542!6.09e-17!53;CL:0000051!6.09e-17!53;CL:0000785!6.43e-14!2;CL:0000955!6.43e-14!2;CL:0000818!6.43e-14!2;CL:0000954!6.43e-14!2;CL:0000816!6.43e-14!2;CL:0000817!1.01e-09!3;CL:0002087!1.59e-07!119;CL:0002031!3.19e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.84e-34;1!CL:0000786;1.84e-34;1!CL:0000945;1.50e-22;24!CL:0000542;2.28e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.84e-34,1;CL:0000786,1.84e-34,1;CL:0000980,1.84e-34,1;CL:0000945,1.54e-22,24;CL:0000826,1.54e-22,24;CL:0000785,5.48e-18,2;CL:0000955,5.48e-18,2;CL:0000818,5.48e-18,2;CL:0000954,5.48e-18,2;CL:0000816,5.48e-18,2;CL:0000838,2.69e-16,52;CL:0000542,5.33e-16,53;CL:0000051,5.33e-16,53;CL:0000817,1.85e-12,3;CL:0002087,1.53e-07,115;CL:0002031,3.03e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;5.48e-18;2!CL:0000051;2.28e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.61e-11!10 | |ontology_enrichment_disease=DOID:0060058!6.61e-11!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.10e-09!3;UBERON:0004854!1.10e-09!3;UBERON:0009034!1.10e-09!3;UBERON:0002095!1.10e-09!3;UBERON:0004782!1.10e-09!3;UBERON:0003281!1.10e-09!3;UBERON:0009664!1.10e-09!3;UBERON:0002296!1.10e-09!3;UBERON:0005602!1.10e-09!3;UBERON:0001179!1.10e-09!3;UBERON:0006293!1.10e-09!3 | |ontology_enrichment_uberon=UBERON:0002106!1.10e-09!3;UBERON:0004854!1.10e-09!3;UBERON:0009034!1.10e-09!3;UBERON:0002095!1.10e-09!3;UBERON:0004782!1.10e-09!3;UBERON:0003281!1.10e-09!3;UBERON:0009664!1.10e-09!3;UBERON:0002296!1.10e-09!3;UBERON:0005602!1.10e-09!3;UBERON:0001179!1.10e-09!3;UBERON:0006293!1.10e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-12;3!UBERON:0004177;5.92e-08;5!UBERON:0005057;5.92e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3 | |||
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|short_description=p@chr21:20741173..20741184,- | |short_description=p@chr21:20741173..20741184,- | ||
}} | }} |
Latest revision as of 16:53, 28 July 2015
Short description: | p@chr21:20741173..20741184, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:20741173..20741184, - |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.84e-34 | 1 |
plasma cell | 1.84e-34 | 1 |
plasmablast | 1.84e-34 | 1 |
lymphocyte of B lineage | 1.54e-22 | 24 |
pro-B cell | 1.54e-22 | 24 |
mature B cell | 5.48e-18 | 2 |
pre-B-II cell | 5.48e-18 | 2 |
transitional stage B cell | 5.48e-18 | 2 |
small pre-B-II cell | 5.48e-18 | 2 |
immature B cell | 5.48e-18 | 2 |
lymphoid lineage restricted progenitor cell | 2.69e-16 | 52 |
lymphocyte | 5.33e-16 | 53 |
common lymphoid progenitor | 5.33e-16 | 53 |
precursor B cell | 1.85e-12 | 3 |
nongranular leukocyte | 1.53e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.03e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |