FFCP PHASE1:Hg19::chr21:44842554..44842566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:44842554..44842566,- | |||
|coexpression_cluster_id=C541 | |coexpression_cluster_id=C541 | ||
|description=CAGE_peak_at_chr21:44842554..44842566,- | |description=CAGE_peak_at_chr21:44842554..44842566,- | ||
|id=chr21:44842554..44842566,- | |id=chr21:44842554..44842566,- | ||
|ontology_enrichment_celltype=CL:0002150!7.40e-20!3;CL:0000861!7.40e-20!3 | |ontology_enrichment_celltype=CL:0002150!7.40e-20!3;CL:0000861!7.40e-20!3 | ||
|ontology_enrichment_celltype_v019=CL:0000082;2.55e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,2.58e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.18e-30;29!UBERON:0001041;4.68e-10;30 | |||
|ontology_enrichment_disease=DOID:305!1.49e-16!106;DOID:0050687!2.54e-11!143;DOID:162!3.57e-07!235;DOID:14566!6.08e-07!239 | |ontology_enrichment_disease=DOID:305!1.49e-16!106;DOID:0050687!2.54e-11!143;DOID:162!3.57e-07!235;DOID:14566!6.08e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1324;1.20e-11;15!DOID:0050615;5.89e-11;16!DOID:4556;1.93e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.18e-13,106;DOID:1324,1.23e-11,15;DOID:0050615,5.99e-11,16;DOID:0050687,1.21e-09,143;DOID:4556,1.93e-07,3;DOID:162,5.71e-07,235;DOID:14566,8.30e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.24e-58!9;UBERON:0008947!5.99e-27!38;UBERON:0003258!5.99e-27!38;UBERON:0001557!8.51e-27!19;UBERON:0000072!8.07e-22!46;UBERON:0000065!1.34e-18!53;UBERON:0001004!3.54e-15!72;UBERON:0001041!3.94e-12!98;UBERON:0000063!1.56e-10!97;UBERON:0000077!2.05e-08!130;UBERON:0004921!2.05e-08!129;UBERON:0004185!2.05e-08!129 | |ontology_enrichment_uberon=UBERON:0001737!4.24e-58!9;UBERON:0008947!5.99e-27!38;UBERON:0003258!5.99e-27!38;UBERON:0001557!8.51e-27!19;UBERON:0000072!8.07e-22!46;UBERON:0000065!1.34e-18!53;UBERON:0001004!3.54e-15!72;UBERON:0001041!3.94e-12!98;UBERON:0000063!1.56e-10!97;UBERON:0000077!2.05e-08!130;UBERON:0004921!2.05e-08!129;UBERON:0004185!2.05e-08!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.42e-32;9!UBERON:0001557;5.42e-32;9!UBERON:0000065;3.44e-19;44!UBERON:0000072;8.09e-19;37!UBERON:0004802;2.55e-09;19!UBERON:0000115;2.55e-09;19!UBERON:0002048;3.98e-08;22!UBERON:0004807;3.98e-08;22!UBERON:0000117;3.98e-08;22!UBERON:0000171;3.98e-08;22!UBERON:0000170;3.98e-08;22!UBERON:0001004;1.47e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.61e-32,9;UBERON:0008947,5.83e-23,38;UBERON:0003258,5.83e-23,38;UBERON:0000072,1.59e-18,47;UBERON:0000065,4.31e-16,54;UBERON:0001557,1.95e-15,19;UBERON:0001041,8.35e-13,87;UBERON:0001004,1.16e-11,74;UBERON:0004802,2.58e-09,19;UBERON:0000115,2.58e-09,19;UBERON:0004921,3.17e-09,118;UBERON:0002048,4.03e-08,22;UBERON:0000117,4.03e-08,22;UBERON:0000171,4.03e-08,22;UBERON:0000170,4.03e-08,22;UBERON:0005597,4.03e-08,22;UBERON:0000118,4.03e-08,22;UBERON:0001007,2.05e-07,145;UBERON:0001555,2.05e-07,145;UBERON:0007026,2.05e-07,145 | |||
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|short_description=p@chr21:44842554..44842566,- | |short_description=p@chr21:44842554..44842566,- | ||
}} | }} |
Latest revision as of 18:17, 28 July 2015
Short description: | p@chr21:44842554..44842566, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44842554..44842566, - |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 2.58e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.61e-32 | 9 |
respiratory primordium | 5.83e-23 | 38 |
endoderm of foregut | 5.83e-23 | 38 |
segment of respiratory tract | 1.59e-18 | 47 |
respiratory tract | 4.31e-16 | 54 |
upper respiratory tract | 1.95e-15 | 19 |
foregut | 8.35e-13 | 87 |
respiratory system | 1.16e-11 | 74 |
respiratory tract epithelium | 2.58e-09 | 19 |
lung epithelium | 2.58e-09 | 19 |
subdivision of digestive tract | 3.17e-09 | 118 |
lung | 4.03e-08 | 22 |
respiratory tube | 4.03e-08 | 22 |
respiration organ | 4.03e-08 | 22 |
pair of lungs | 4.03e-08 | 22 |
lung primordium | 4.03e-08 | 22 |
lung bud | 4.03e-08 | 22 |
digestive system | 2.05e-07 | 145 |
digestive tract | 2.05e-07 | 145 |
primitive gut | 2.05e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.18e-13 | 106 |
lung cancer | 1.23e-11 | 15 |
respiratory system cancer | 5.99e-11 | 16 |
cell type cancer | 1.21e-09 | 143 |
lung large cell carcinoma | 1.93e-07 | 3 |
cancer | 5.71e-07 | 235 |
disease of cellular proliferation | 8.30e-07 | 239 |