FFCP PHASE1:Hg19::chr22:35806599..35806615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4174 | |EntrezGene=4174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6948 | |HGNC=6948 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_ENST00000493076,uc003anw.1_5end | |association_with_transcript=197bp_to_ENST00000493076,uc003anw.1_5end | ||
|cluster_id=chr22:35806599..35806615,+ | |||
|coexpression_cluster_id=C2621 | |coexpression_cluster_id=C2621 | ||
|description=CAGE_peak_8_at_MCM5_5end | |description=CAGE_peak_8_at_MCM5_5end | ||
|id=chr22:35806599..35806615,+ | |id=chr22:35806599..35806615,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.25e-59!140;CL:0000037!2.55e-46!172;CL:0000566!2.55e-46!172;CL:0000988!7.88e-43!182;CL:0002032!2.36e-40!165;CL:0000837!2.36e-40!165;CL:0002087!1.47e-39!119;CL:0000766!1.20e-38!76;CL:0002057!3.10e-36!42;CL:0002031!4.73e-34!124;CL:0000860!2.91e-33!45;CL:0002009!1.70e-31!65;CL:0000763!8.30e-31!112;CL:0000049!8.30e-31!112;CL:0002194!1.48e-30!63;CL:0000576!1.48e-30!63;CL:0000040!1.48e-30!63;CL:0000559!1.48e-30!63;CL:0000557!4.78e-28!71;CL:0000839!1.33e-26!70;CL:0000451!1.54e-16!10;CL:0000094!1.76e-15!8;CL:0000945!1.85e-14!24;CL:0000826!1.85e-14!24;CL:0000134!1.94e-13!358;CL:0002320!7.24e-13!365;CL:0000990!1.27e-12!8;CL:0002393!7.39e-12!9;CL:0002397!7.39e-12!9;CL:0000081!6.76e-11!11;CL:0000219!7.34e-11!390;CL:0000453!7.12e-09!5;CL:0000542!7.98e-09!53;CL:0000051!7.98e-09!53;CL:0000034!8.66e-09!444;CL:0000048!1.70e-08!430;CL:0000767!2.27e-08!3;CL:0000723!3.64e-08!436;CL:0000838!6.04e-08!52;CL:0000784!1.66e-07!3 | |ontology_enrichment_celltype=CL:0000738!8.25e-59!140;CL:0000037!2.55e-46!172;CL:0000566!2.55e-46!172;CL:0000988!7.88e-43!182;CL:0002032!2.36e-40!165;CL:0000837!2.36e-40!165;CL:0002087!1.47e-39!119;CL:0000766!1.20e-38!76;CL:0002057!3.10e-36!42;CL:0002031!4.73e-34!124;CL:0000860!2.91e-33!45;CL:0002009!1.70e-31!65;CL:0000763!8.30e-31!112;CL:0000049!8.30e-31!112;CL:0002194!1.48e-30!63;CL:0000576!1.48e-30!63;CL:0000040!1.48e-30!63;CL:0000559!1.48e-30!63;CL:0000557!4.78e-28!71;CL:0000839!1.33e-26!70;CL:0000451!1.54e-16!10;CL:0000094!1.76e-15!8;CL:0000945!1.85e-14!24;CL:0000826!1.85e-14!24;CL:0000134!1.94e-13!358;CL:0002320!7.24e-13!365;CL:0000990!1.27e-12!8;CL:0002393!7.39e-12!9;CL:0002397!7.39e-12!9;CL:0000081!6.76e-11!11;CL:0000219!7.34e-11!390;CL:0000453!7.12e-09!5;CL:0000542!7.98e-09!53;CL:0000051!7.98e-09!53;CL:0000034!8.66e-09!444;CL:0000048!1.70e-08!430;CL:0000767!2.27e-08!3;CL:0000723!3.64e-08!436;CL:0000838!6.04e-08!52;CL:0000784!1.66e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.12e-38;8!CL:0000081;4.74e-28;11!CL:0000771;6.42e-19;2!CL:0000453;5.59e-17;5!CL:0000945;7.11e-17;24!CL:0000775;1.50e-12;3!CL:0000767;2.38e-12;3!CL:0000990;1.14e-09;8!CL:0000451;5.40e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.46e-38,8;CL:0000081,5.74e-28,11;CL:0000738,1.87e-27,136;CL:0002032,1.01e-22,161;CL:0000837,1.01e-22,161;CL:0000037,1.21e-21,168;CL:0000988,2.20e-20,177;CL:0000771,5.37e-19,2;CL:0000453,5.59e-17,5;CL:0000945,7.03e-17,24;CL:0000826,7.03e-17,24;CL:0000763,2.71e-13,108;CL:0000049,2.71e-13,108;CL:0000766,1.51e-12,72;CL:0000775,1.59e-12,3;CL:0000767,3.18e-12,3;CL:0002087,2.34e-10,115;CL:0002031,7.71e-10,120;CL:0000990,1.14e-09,8;CL:0000838,1.25e-09,52;CL:0000542,1.98e-09,53;CL:0000051,1.98e-09,53;CL:0000134,1.65e-08,354;CL:0002320,2.82e-08,361;CL:0000451,5.40e-08,10;CL:0000219,1.89e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;2.48e-10;1!DOID:0070004;2.48e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.59e-10,1;DOID:0070004,2.59e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.11e-27!102;UBERON:0003061!5.11e-27!102;UBERON:0002193!1.53e-26!112;UBERON:0002371!9.82e-26!80;UBERON:0002405!5.47e-24!115;UBERON:0001474!2.85e-23!86;UBERON:0004765!2.06e-18!101;UBERON:0001434!2.06e-18!101;UBERON:0002384!4.35e-12!375;UBERON:0002106!2.39e-08!3;UBERON:0004854!2.39e-08!3;UBERON:0009034!2.39e-08!3;UBERON:0002095!2.39e-08!3;UBERON:0004782!2.39e-08!3;UBERON:0003281!2.39e-08!3;UBERON:0009664!2.39e-08!3;UBERON:0002296!2.39e-08!3;UBERON:0005602!2.39e-08!3;UBERON:0001179!2.39e-08!3;UBERON:0006293!2.39e-08!3;UBERON:0003081!7.74e-08!216;UBERON:0002204!1.10e-07!167;UBERON:0006331!9.33e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!5.11e-27!102;UBERON:0003061!5.11e-27!102;UBERON:0002193!1.53e-26!112;UBERON:0002371!9.82e-26!80;UBERON:0002405!5.47e-24!115;UBERON:0001474!2.85e-23!86;UBERON:0004765!2.06e-18!101;UBERON:0001434!2.06e-18!101;UBERON:0002384!4.35e-12!375;UBERON:0002106!2.39e-08!3;UBERON:0004854!2.39e-08!3;UBERON:0009034!2.39e-08!3;UBERON:0002095!2.39e-08!3;UBERON:0004782!2.39e-08!3;UBERON:0003281!2.39e-08!3;UBERON:0009664!2.39e-08!3;UBERON:0002296!2.39e-08!3;UBERON:0005602!2.39e-08!3;UBERON:0001179!2.39e-08!3;UBERON:0006293!2.39e-08!3;UBERON:0003081!7.74e-08!216;UBERON:0002204!1.10e-07!167;UBERON:0006331!9.33e-07!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.89e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.06730766284929,0.944529375764151,1.18009283054671,1.15148819429164,0.77408061658038,0,0,0,0,0.995184627411951,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.726991193897824,0,0,0.697287110717054,0,0.309706370895104,0.575384784644301,0.256160706529101,0.47296445977717,1.03423704220986,0,1.35426486594342,0.941211697713023,0.272906150057846,1.79778787556068,0.612167784741805,0.641858054152187,3.19668562899521,0.659702600373432,0,0.426224750532694,0.580418477257168,0,0,0,0,0.217188844705117,0,0.736555271975129,0.632924774881769,0.422510572623884,0,0.628975936525128,0,0,0.16072558669708,0.855038231223746,0,0.730656615058536,0,1.09227722252426,0,0,0,0,0,0,1.70763890732835,2.93618594685469,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.664789802594326,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,2.24702107184155,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0.496166021811951,0,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8201108093786,4.11881004971426,8.01470431853637,0,0,0,0,0,3.44429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.751871343838829,0.902410431630081,1.59905849479886,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p8@MCM5 | |short_description=p8@MCM5 | ||
}} | }} |
Latest revision as of 00:05, 20 September 2015
Short description: | p8@MCM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MCM5_5end |
Coexpression cluster: | C2621_migratory_Eosinophils_Neutrophils_CD14_hairy_immature_Mast |
Association with transcript: | 197bp_to_ENST00000493076, uc003anw.1_5end |
EntrezGene: | MCM5 |
HGNC: | 6948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.46e-38 | 8 |
blood cell | 5.74e-28 | 11 |
leukocyte | 1.87e-27 | 136 |
hematopoietic oligopotent progenitor cell | 1.01e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-22 | 161 |
hematopoietic stem cell | 1.21e-21 | 168 |
hematopoietic cell | 2.20e-20 | 177 |
eosinophil | 5.37e-19 | 2 |
Langerhans cell | 5.59e-17 | 5 |
lymphocyte of B lineage | 7.03e-17 | 24 |
pro-B cell | 7.03e-17 | 24 |
myeloid cell | 2.71e-13 | 108 |
common myeloid progenitor | 2.71e-13 | 108 |
myeloid leukocyte | 1.51e-12 | 72 |
neutrophil | 1.59e-12 | 3 |
basophil | 3.18e-12 | 3 |
nongranular leukocyte | 2.34e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 7.71e-10 | 120 |
conventional dendritic cell | 1.14e-09 | 8 |
lymphoid lineage restricted progenitor cell | 1.25e-09 | 52 |
lymphocyte | 1.98e-09 | 53 |
common lymphoid progenitor | 1.98e-09 | 53 |
mesenchymal cell | 1.65e-08 | 354 |
connective tissue cell | 2.82e-08 | 361 |
dendritic cell | 5.40e-08 | 10 |
motile cell | 1.89e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.89e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.59e-10 | 1 |
myeloma | 2.59e-10 | 1 |