FFCP PHASE1:Hg19::chr2:216259445..216259455,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=Q5CZ99 | |UniProt=Q5CZ99 | ||
|association_with_transcript=-29bp_to_CR936623_5end | |association_with_transcript=-29bp_to_CR936623_5end | ||
|cluster_id=chr2:216259445..216259455,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_53_at_FN1_5end | |description=CAGE_peak_53_at_FN1_5end | ||
|id=chr2:216259445..216259455,- | |id=chr2:216259445..216259455,- | ||
|ontology_enrichment_celltype=CL:0000055!9.08e-27!180;CL:0000057!2.31e-26!75;CL:0002371!2.15e-15!591;CL:0000144!1.01e-13!625;CL:0000048!3.94e-11!430;CL:0000723!1.34e-10!436;CL:0000034!6.20e-10!444;CL:0002620!6.35e-10!23;CL:0000548!2.08e-09!679;CL:0000004!2.08e-09!679;CL:0000255!2.08e-09!679;CL:0002334!2.54e-09!12;CL:0000012!5.28e-09!682;CL:0000680!4.54e-08!57;CL:0000056!4.54e-08!57;CL:0000355!4.54e-08!57;CL:0000183!1.02e-07!59;CL:0002494!2.42e-07!16;CL:0000499!3.05e-07!27;CL:0000187!4.51e-07!54 | |ontology_enrichment_celltype=CL:0000055!9.08e-27!180;CL:0000057!2.31e-26!75;CL:0002371!2.15e-15!591;CL:0000144!1.01e-13!625;CL:0000048!3.94e-11!430;CL:0000723!1.34e-10!436;CL:0000034!6.20e-10!444;CL:0002620!6.35e-10!23;CL:0000548!2.08e-09!679;CL:0000004!2.08e-09!679;CL:0000255!2.08e-09!679;CL:0002334!2.54e-09!12;CL:0000012!5.28e-09!682;CL:0000680!4.54e-08!57;CL:0000056!4.54e-08!57;CL:0000355!4.54e-08!57;CL:0000183!1.02e-07!59;CL:0002494!2.42e-07!16;CL:0000499!3.05e-07!27;CL:0000187!4.51e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.15e-13;12!CL:0000134;9.67e-12;55!CL:0000723;3.50e-11;61!CL:0002620;3.10e-10;23!CL:0000057;1.06e-09;73!CL:0000048;2.78e-09;58!CL:0000034;6.26e-09;69!CL:0002320;1.60e-08;188!CL:0002570;3.68e-07;8!CL:0000349;7.46e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.44e-25,76;CL:0002334,1.14e-13,12;CL:0002320,1.17e-13,361;CL:0000048,1.50e-13,427;CL:0000723,6.75e-13,433;CL:0000034,4.63e-12,441;CL:0000134,1.29e-11,354;CL:0002620,4.53e-10,23;CL:0000219,3.87e-09,386;CL:0002570,3.08e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.37e-11!83;UBERON:0002329!1.37e-11!83;UBERON:0003077!1.37e-11!83;UBERON:0003059!1.37e-11!83;UBERON:0007282!1.37e-11!83;UBERON:0009618!1.37e-11!83;UBERON:0007285!1.37e-11!83;UBERON:0002199!1.29e-10!45;UBERON:0002416!1.29e-10!45;UBERON:0003102!2.37e-10!95;UBERON:0005256!3.62e-10!143;UBERON:0004290!2.67e-09!70;UBERON:0002097!1.62e-08!40;UBERON:0000486!2.62e-08!82;UBERON:0001013!1.59e-07!14;UBERON:0001134!4.19e-07!61;UBERON:0002036!4.19e-07!61;UBERON:0003082!4.19e-07!61;UBERON:0002385!5.22e-07!63;UBERON:0001015!5.22e-07!63;UBERON:0000383!5.22e-07!63;UBERON:0002384!6.88e-07!375;UBERON:0004872!7.22e-07!84;UBERON:0002100!8.10e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!1.37e-11!83;UBERON:0002329!1.37e-11!83;UBERON:0003077!1.37e-11!83;UBERON:0003059!1.37e-11!83;UBERON:0007282!1.37e-11!83;UBERON:0009618!1.37e-11!83;UBERON:0007285!1.37e-11!83;UBERON:0002199!1.29e-10!45;UBERON:0002416!1.29e-10!45;UBERON:0003102!2.37e-10!95;UBERON:0005256!3.62e-10!143;UBERON:0004290!2.67e-09!70;UBERON:0002097!1.62e-08!40;UBERON:0000486!2.62e-08!82;UBERON:0001013!1.59e-07!14;UBERON:0001134!4.19e-07!61;UBERON:0002036!4.19e-07!61;UBERON:0003082!4.19e-07!61;UBERON:0002385!5.22e-07!63;UBERON:0001015!5.22e-07!63;UBERON:0000383!5.22e-07!63;UBERON:0002384!6.88e-07!375;UBERON:0004872!7.22e-07!84;UBERON:0002100!8.10e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.26e-08;198!UBERON:0001013;1.38e-08;14!UBERON:0002199;7.65e-08;46!UBERON:0002416;7.65e-08;46!UBERON:0002097;2.15e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.60e-15,371;UBERON:0002199,2.85e-11,46;UBERON:0002416,2.85e-11,46;UBERON:0002097,6.29e-09,41;UBERON:0001013,7.12e-09,14;UBERON:0003102,4.32e-07,99 | |||
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| ||
|short_description=p53@FN1 | |short_description=p53@FN1 | ||
}} | }} |
Latest revision as of 03:19, 20 September 2015
Short description: | p53@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_53_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -29bp_to_CR936623_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | Q5CZ99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.44e-25 | 76 |
preadipocyte | 1.14e-13 | 12 |
connective tissue cell | 1.17e-13 | 361 |
multi fate stem cell | 1.50e-13 | 427 |
somatic stem cell | 6.75e-13 | 433 |
stem cell | 4.63e-12 | 441 |
mesenchymal cell | 1.29e-11 | 354 |
skin fibroblast | 4.53e-10 | 23 |
motile cell | 3.87e-09 | 386 |
mesenchymal stem cell of adipose | 3.08e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.60e-15 | 371 |
integument | 2.85e-11 | 46 |
integumental system | 2.85e-11 | 46 |
skin of body | 6.29e-09 | 41 |
adipose tissue | 7.12e-09 | 14 |
surface structure | 4.32e-07 | 99 |