FFCP PHASE1:Hg19::chr3:196731256..196731267,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4241 | |EntrezGene=4241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7037 | |HGNC=7037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-206bp_to_ENST00000469783_5end | |association_with_transcript=-206bp_to_ENST00000469783_5end | ||
|cluster_id=chr3:196731256..196731267,- | |||
|coexpression_cluster_id=C1913 | |coexpression_cluster_id=C1913 | ||
|description=CAGE_peak_9_at_MFI2_5end | |description=CAGE_peak_9_at_MFI2_5end | ||
|id=chr3:196731256..196731267,- | |id=chr3:196731256..196731267,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.89e-57!22;UBERON:0001950!3.21e-55!20;UBERON:0001893!2.48e-53!34;UBERON:0001869!1.00e-50!32;UBERON:0000956!1.81e-50!25;UBERON:0000203!1.81e-50!25;UBERON:0002791!8.78e-49!33;UBERON:0002780!8.04e-44!41;UBERON:0001890!8.04e-44!41;UBERON:0006240!8.04e-44!41;UBERON:0003080!1.03e-42!42;UBERON:0002020!6.17e-42!34;UBERON:0003528!6.17e-42!34;UBERON:0001049!1.07e-30!57;UBERON:0005068!1.07e-30!57;UBERON:0006241!1.07e-30!57;UBERON:0007135!1.07e-30!57;UBERON:0000955!1.15e-30!69;UBERON:0006238!1.15e-30!69;UBERON:0002616!1.51e-29!59;UBERON:0003056!1.79e-28!61;UBERON:0001017!3.85e-28!82;UBERON:0001871!3.13e-27!7;UBERON:0005743!1.16e-26!86;UBERON:0000200!1.13e-25!6;UBERON:0003075!3.50e-24!86;UBERON:0007284!3.50e-24!86;UBERON:0000073!8.75e-24!94;UBERON:0001016!8.75e-24!94;UBERON:0002346!6.18e-23!90;UBERON:0007023!1.81e-21!115;UBERON:0000349!1.23e-19!5;UBERON:0002771!6.94e-19!3;UBERON:0000033!2.06e-17!123;UBERON:0000153!2.05e-16!129;UBERON:0007811!2.05e-16!129;UBERON:0004121!2.83e-14!169;UBERON:0000924!7.64e-14!173;UBERON:0006601!7.64e-14!173;UBERON:0001876!2.81e-13!2;UBERON:0001872!4.46e-12!5;UBERON:0002021!1.04e-11!5;UBERON:0007190!9.71e-08!1;UBERON:0002022!1.03e-07!1;UBERON:0002581!1.10e-07!1;UBERON:0002902!1.33e-07!1;UBERON:0009899!1.33e-07!1;UBERON:0001882!1.51e-07!1;UBERON:0005403!1.51e-07!1;UBERON:0000025!1.90e-07!194;UBERON:0003112!3.01e-07!1;UBERON:0000032!3.01e-07!1;UBERON:0005253!3.01e-07!1;UBERON:0003128!3.01e-07!1;UBERON:0002241!3.01e-07!1;UBERON:0001703!3.01e-07!1;UBERON:0004761!3.01e-07!1;UBERON:0009617!3.01e-07!1;UBERON:0002336!4.90e-07!1;UBERON:0001018!4.90e-07!1;UBERON:0002473!4.90e-07!1;UBERON:0005340!4.90e-07!1;UBERON:0002316!4.90e-07!1;UBERON:0003544!4.90e-07!1;UBERON:0001020!4.90e-07!1;UBERON:0005970!4.90e-07!1;UBERON:0002437!4.90e-07!1 | |ontology_enrichment_uberon=UBERON:0002619!1.89e-57!22;UBERON:0001950!3.21e-55!20;UBERON:0001893!2.48e-53!34;UBERON:0001869!1.00e-50!32;UBERON:0000956!1.81e-50!25;UBERON:0000203!1.81e-50!25;UBERON:0002791!8.78e-49!33;UBERON:0002780!8.04e-44!41;UBERON:0001890!8.04e-44!41;UBERON:0006240!8.04e-44!41;UBERON:0003080!1.03e-42!42;UBERON:0002020!6.17e-42!34;UBERON:0003528!6.17e-42!34;UBERON:0001049!1.07e-30!57;UBERON:0005068!1.07e-30!57;UBERON:0006241!1.07e-30!57;UBERON:0007135!1.07e-30!57;UBERON:0000955!1.15e-30!69;UBERON:0006238!1.15e-30!69;UBERON:0002616!1.51e-29!59;UBERON:0003056!1.79e-28!61;UBERON:0001017!3.85e-28!82;UBERON:0001871!3.13e-27!7;UBERON:0005743!1.16e-26!86;UBERON:0000200!1.13e-25!6;UBERON:0003075!3.50e-24!86;UBERON:0007284!3.50e-24!86;UBERON:0000073!8.75e-24!94;UBERON:0001016!8.75e-24!94;UBERON:0002346!6.18e-23!90;UBERON:0007023!1.81e-21!115;UBERON:0000349!1.23e-19!5;UBERON:0002771!6.94e-19!3;UBERON:0000033!2.06e-17!123;UBERON:0000153!2.05e-16!129;UBERON:0007811!2.05e-16!129;UBERON:0004121!2.83e-14!169;UBERON:0000924!7.64e-14!173;UBERON:0006601!7.64e-14!173;UBERON:0001876!2.81e-13!2;UBERON:0001872!4.46e-12!5;UBERON:0002021!1.04e-11!5;UBERON:0007190!9.71e-08!1;UBERON:0002022!1.03e-07!1;UBERON:0002581!1.10e-07!1;UBERON:0002902!1.33e-07!1;UBERON:0009899!1.33e-07!1;UBERON:0001882!1.51e-07!1;UBERON:0005403!1.51e-07!1;UBERON:0000025!1.90e-07!194;UBERON:0003112!3.01e-07!1;UBERON:0000032!3.01e-07!1;UBERON:0005253!3.01e-07!1;UBERON:0003128!3.01e-07!1;UBERON:0002241!3.01e-07!1;UBERON:0001703!3.01e-07!1;UBERON:0004761!3.01e-07!1;UBERON:0009617!3.01e-07!1;UBERON:0002336!4.90e-07!1;UBERON:0001018!4.90e-07!1;UBERON:0002473!4.90e-07!1;UBERON:0005340!4.90e-07!1;UBERON:0002316!4.90e-07!1;UBERON:0003544!4.90e-07!1;UBERON:0001020!4.90e-07!1;UBERON:0005970!4.90e-07!1;UBERON:0002437!4.90e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.49e-22;20!UBERON:0002619;3.62e-20;22!UBERON:0000956;5.83e-18;25!UBERON:0000203;5.83e-18;25!UBERON:0001870;9.45e-18;3!UBERON:0003528;1.06e-15;34!UBERON:0002020;1.06e-15;34!UBERON:0001893;6.78e-15;34!UBERON:0001869;4.34e-14;32!UBERON:0002791;1.77e-12;32!UBERON:0001872;3.26e-11;5!UBERON:0002780;4.30e-09;41!UBERON:0001890;4.30e-09;41!UBERON:0001871;2.18e-08;6!UBERON:0000955;1.15e-07;68!UBERON:0001017;1.23e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.49e-22,20;UBERON:0002619,3.62e-20,22;UBERON:0000956,5.83e-18,25;UBERON:0000203,5.83e-18,25;UBERON:0001870,9.46e-18,3;UBERON:0002791,2.31e-14,32;UBERON:0001869,2.31e-14,32;UBERON:0003528,1.35e-13,34;UBERON:0002020,1.35e-13,34;UBERON:0001893,1.35e-13,34;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0001872,2.94e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0001871,2.35e-08,6;UBERON:0003056,4.61e-08,61;UBERON:0007023,8.86e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.250381861413,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.41023272848151,0,0.553258019713743,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,0,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72350050919134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987235286372,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.250381861413,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.41023272848151,0,0.553258019713743,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,0,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72350050919134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987235286372,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@MFI2 | |short_description=p9@MFI2 | ||
}} | }} |
Latest revision as of 16:26, 17 September 2015
Short description: | p9@MFI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MFI2_5end |
Coexpression cluster: | C1913_brain_parietal_insula_temporal_frontal_postcentral_paracentral |
Association with transcript: | -206bp_to_ENST00000469783_5end |
EntrezGene: | MFI2 |
HGNC: | 7037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 5.49e-22 | 20 |
regional part of cerebral cortex | 3.62e-20 | 22 |
cerebral cortex | 5.83e-18 | 25 |
pallium | 5.83e-18 | 25 |
frontal cortex | 9.46e-18 | 3 |
regional part of telencephalon | 2.31e-14 | 32 |
cerebral hemisphere | 2.31e-14 | 32 |
brain grey matter | 1.35e-13 | 34 |
gray matter | 1.35e-13 | 34 |
telencephalon | 1.35e-13 | 34 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
regional part of forebrain | 1.73e-11 | 41 |
forebrain | 1.73e-11 | 41 |
anterior neural tube | 1.73e-11 | 41 |
future forebrain | 1.73e-11 | 41 |
parietal lobe | 2.94e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
temporal lobe | 2.35e-08 | 6 |
pre-chordal neural plate | 4.61e-08 | 61 |
adult organism | 8.86e-08 | 114 |