FFCP PHASE1:Hg19::chr19:35775864..35775878,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:35775864..35775878,+
|short_description=p4@HAMP
|description=CAGE_peak_4_at_HAMP_5end
|association_with_transcript=-60bp_to_AF147355_5end
|EntrezGene=578...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57817 | |EntrezGene=57817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15598 | |HGNC=15598 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_AF147355_5end | |||
|cluster_id=chr19:35775864..35775878,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_HAMP_5end | |||
|id=chr19:35775864..35775878,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.22e-09!12;CL:0000417!2.22e-09!12;CL:0000668!2.22e-09!12;CL:0000414!2.22e-09!12;CL:0000412!2.22e-09!12;CL:0000182!2.22e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.06e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.97e-08;11!UBERON:0006241;7.76e-08;3!UBERON:0003057;7.76e-08;3!UBERON:0009497;4.07e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!6.43e-21!8;UBERON:0006331!8.16e-21!3;UBERON:0002148!1.80e-14!2;UBERON:0009662!1.80e-14!2;UBERON:0002107!1.13e-12!19;UBERON:0006925!1.13e-12!19;UBERON:0008836!1.13e-12!19;UBERON:0002308!3.17e-12!9;UBERON:0000125!3.17e-12!9;UBERON:0003076!3.81e-11!15;UBERON:0003057!3.81e-11!15;UBERON:0008835!7.21e-11!22;UBERON:0003894!7.21e-11!22;UBERON:0009854!2.26e-10!23;UBERON:0001896!5.74e-10!3;UBERON:0005290!5.74e-10!3;UBERON:0010096!5.74e-10!3;UBERON:0000988!6.00e-10!3;UBERON:0001049!7.08e-10!57;UBERON:0005068!7.08e-10!57;UBERON:0006241!7.08e-10!57;UBERON:0007135!7.08e-10!57;UBERON:0007499!1.70e-09!25;UBERON:0009497!1.70e-09!25;UBERON:0000015!1.70e-09!25;UBERON:0002423!1.70e-09!25;UBERON:0006235!1.70e-09!25;UBERON:0004161!1.70e-09!25;UBERON:0004733!3.50e-09!12;UBERON:0002028!3.50e-09!12;UBERON:0007277!3.50e-09!12;UBERON:0005057!4.14e-09!26;UBERON:0009856!4.14e-09!26;UBERON:0007023!1.16e-08!115;UBERON:0004732!1.75e-08!13;UBERON:0002038!4.40e-08!1;UBERON:0009661!4.40e-08!1;UBERON:0000955!1.08e-07!69;UBERON:0006238!1.08e-07!69;UBERON:0001017!1.16e-07!82;UBERON:0002616!1.26e-07!59;UBERON:0002365!1.51e-07!31;UBERON:0002330!1.51e-07!31;UBERON:0005743!3.14e-07!86;UBERON:0002346!6.24e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.93e-26;19!UBERON:0006925;1.93e-26;19!UBERON:0002423;3.69e-20;25!UBERON:0002365;2.91e-16;31!UBERON:0002330;2.91e-16;31!UBERON:0002368;4.44e-14;33!UBERON:0000949;2.83e-10;43!UBERON:0001896;7.76e-08;3!UBERON:0002240;7.76e-08;3!UBERON:0005174;7.76e-08;3!UBERON:0005290;7.76e-08;3!UBERON:0001137;7.76e-08;3!UBERON:0005172;1.79e-07;52!UBERON:0005173;1.79e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-26,19;UBERON:0006925,1.88e-26,19;UBERON:0008836,1.88e-26,19;UBERON:0008835,6.97e-23,22;UBERON:0003894,6.97e-23,22;UBERON:0009854,6.71e-22,23;UBERON:0007499,3.62e-20,25;UBERON:0009497,3.62e-20,25;UBERON:0000015,3.62e-20,25;UBERON:0002423,3.62e-20,25;UBERON:0006235,3.62e-20,25;UBERON:0004161,3.62e-20,25;UBERON:0009856,2.11e-19,26;UBERON:0002365,2.63e-16,31;UBERON:0002330,2.63e-16,31;UBERON:0002368,1.83e-14,35;UBERON:0000949,2.79e-11,45;UBERON:0003929,2.04e-09,54;UBERON:0005172,2.04e-09,54;UBERON:0005173,2.04e-09,54;UBERON:0002530,1.26e-08,59;UBERON:0002417,1.76e-08,60;UBERON:0000916,1.76e-08,60;UBERON:0002240,7.26e-08,3;UBERON:0005174,7.26e-08,3;UBERON:0001137,7.26e-08,3;UBERON:0001896,8.29e-08,3;UBERON:0005290,8.29e-08,3;UBERON:0010096,8.29e-08,3 | |||
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|short_description=p4@HAMP | |||
}} | }} |
Latest revision as of 11:23, 17 September 2015
Short description: | p4@HAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HAMP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -60bp_to_AF147355_5end |
EntrezGene: | HAMP |
HGNC: | 15598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-26 | 19 |
digestive gland | 1.88e-26 | 19 |
liver bud | 1.88e-26 | 19 |
hepatic diverticulum | 6.97e-23 | 22 |
liver primordium | 6.97e-23 | 22 |
digestive tract diverticulum | 6.71e-22 | 23 |
epithelial sac | 3.62e-20 | 25 |
epithelium of foregut-midgut junction | 3.62e-20 | 25 |
anatomical boundary | 3.62e-20 | 25 |
hepatobiliary system | 3.62e-20 | 25 |
foregut-midgut junction | 3.62e-20 | 25 |
septum transversum | 3.62e-20 | 25 |
sac | 2.11e-19 | 26 |
exocrine gland | 2.63e-16 | 31 |
exocrine system | 2.63e-16 | 31 |
endocrine gland | 1.83e-14 | 35 |
endocrine system | 2.79e-11 | 45 |
gut epithelium | 2.04e-09 | 54 |
abdomen element | 2.04e-09 | 54 |
abdominal segment element | 2.04e-09 | 54 |
gland | 1.26e-08 | 59 |
abdominal segment of trunk | 1.76e-08 | 60 |
abdomen | 1.76e-08 | 60 |
spinal cord | 7.26e-08 | 3 |
dorsal region element | 7.26e-08 | 3 |
dorsum | 7.26e-08 | 3 |
medulla oblongata | 8.29e-08 | 3 |
myelencephalon | 8.29e-08 | 3 |
future myelencephalon | 8.29e-08 | 3 |