FFCP PHASE1:Hg19::chr4:74735431..74735449,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:74735431..74735449,+ | |||
|coexpression_cluster_id=C773 | |coexpression_cluster_id=C773 | ||
|description=CAGE_peak_at_chr4:74735431..74735449,+ | |description=CAGE_peak_at_chr4:74735431..74735449,+ | ||
|id=chr4:74735431..74735449,+ | |id=chr4:74735431..74735449,+ | ||
|ontology_enrichment_celltype=CL:0000359!7.52e-19!32;CL:0000192!4.85e-16!42;CL:0000514!4.85e-16!42;CL:0000680!4.10e-15!57;CL:0000056!4.10e-15!57;CL:0000355!4.10e-15!57;CL:0000183!2.56e-13!59;CL:0000187!3.25e-13!54;CL:0000393!5.54e-11!60;CL:0000211!5.54e-11!60;CL:0000222!1.84e-09!119;CL:0000220!7.14e-08!246;CL:0002321!1.14e-07!248;CL:0000723!2.87e-07!436;CL:0000048!4.70e-07!430;CL:0000055!6.62e-07!180 | |ontology_enrichment_celltype=CL:0000359!7.52e-19!32;CL:0000192!4.85e-16!42;CL:0000514!4.85e-16!42;CL:0000680!4.10e-15!57;CL:0000056!4.10e-15!57;CL:0000355!4.10e-15!57;CL:0000183!2.56e-13!59;CL:0000187!3.25e-13!54;CL:0000393!5.54e-11!60;CL:0000211!5.54e-11!60;CL:0000222!1.84e-09!119;CL:0000220!7.14e-08!246;CL:0002321!1.14e-07!248;CL:0000723!2.87e-07!436;CL:0000048!4.70e-07!430;CL:0000055!6.62e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.44e-32;32!CL:0000192;4.96e-19;43!CL:0002595;7.48e-13;5!CL:0002539;7.91e-13;10!CL:0000775;5.17e-12;3!CL:0002593;6.23e-09;2!CL:0002589;6.86e-09;2!CL:0000569;7.48e-09;4!CL:0002596;2.04e-08;2!CL:0000187;5.06e-08;55!CL:0002494;1.16e-07;16!CL:0000393;1.34e-07;61!CL:0000211;1.34e-07;61!CL:0000094;1.39e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.60e-34,32;CL:0000192,3.73e-24,43;CL:0000514,3.73e-24,43;CL:0000187,6.98e-18,55;CL:0000680,1.01e-16,58;CL:0000056,1.01e-16,58;CL:0000355,1.01e-16,58;CL:0000393,1.11e-15,61;CL:0000211,1.11e-15,61;CL:0002539,6.31e-13,10;CL:0002595,7.31e-13,5;CL:0000775,3.59e-12,3;CL:0000222,7.95e-12,121;CL:0000569,3.60e-09,4;CL:0000011,3.60e-09,4;CL:0002589,6.26e-09,2;CL:0002593,7.02e-09,2;CL:0002596,2.51e-08,2;CL:0000048,4.23e-08,427;CL:0000723,7.58e-08,433;CL:0002494,8.38e-08,16;CL:0000094,1.27e-07,8;CL:0000034,1.61e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;4.96e-19;43!CL:0000011;7.48e-09;4!CL:0000355;5.79e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.13e-20!42;UBERON:0003509!3.13e-20!42;UBERON:0004572!3.13e-20!42;UBERON:0004290!3.49e-16!70;UBERON:0000486!3.60e-16!82;UBERON:0002049!1.56e-15!79;UBERON:0007798!1.56e-15!79;UBERON:0004573!1.69e-15!33;UBERON:0004571!1.69e-15!33;UBERON:0000055!2.64e-15!69;UBERON:0004872!2.74e-15!84;UBERON:0000914!9.50e-15!83;UBERON:0002329!9.50e-15!83;UBERON:0003077!9.50e-15!83;UBERON:0003059!9.50e-15!83;UBERON:0007282!9.50e-15!83;UBERON:0009618!9.50e-15!83;UBERON:0007285!9.50e-15!83;UBERON:0002385!1.17e-14!63;UBERON:0001015!1.17e-14!63;UBERON:0000383!1.17e-14!63;UBERON:0001134!1.40e-14!61;UBERON:0002036!1.40e-14!61;UBERON:0003082!1.40e-14!61;UBERON:0001981!2.89e-14!60;UBERON:0007500!2.89e-14!60;UBERON:0004537!2.89e-14!60;UBERON:0006965!2.89e-14!60;UBERON:0004535!1.87e-12!110;UBERON:0002204!7.70e-12!167;UBERON:0001009!9.15e-12!113;UBERON:0005256!5.52e-10!143;UBERON:0003081!1.66e-09!216;UBERON:0000926!4.05e-09!448;UBERON:0004120!4.05e-09!448;UBERON:0006603!4.05e-09!448;UBERON:0003914!7.55e-09!118;UBERON:0000490!8.19e-08!138;UBERON:0001135!4.69e-07!15;UBERON:0003498!4.80e-07!5;UBERON:0005985!4.80e-07!5 | |ontology_enrichment_uberon=UBERON:0001637!3.13e-20!42;UBERON:0003509!3.13e-20!42;UBERON:0004572!3.13e-20!42;UBERON:0004290!3.49e-16!70;UBERON:0000486!3.60e-16!82;UBERON:0002049!1.56e-15!79;UBERON:0007798!1.56e-15!79;UBERON:0004573!1.69e-15!33;UBERON:0004571!1.69e-15!33;UBERON:0000055!2.64e-15!69;UBERON:0004872!2.74e-15!84;UBERON:0000914!9.50e-15!83;UBERON:0002329!9.50e-15!83;UBERON:0003077!9.50e-15!83;UBERON:0003059!9.50e-15!83;UBERON:0007282!9.50e-15!83;UBERON:0009618!9.50e-15!83;UBERON:0007285!9.50e-15!83;UBERON:0002385!1.17e-14!63;UBERON:0001015!1.17e-14!63;UBERON:0000383!1.17e-14!63;UBERON:0001134!1.40e-14!61;UBERON:0002036!1.40e-14!61;UBERON:0003082!1.40e-14!61;UBERON:0001981!2.89e-14!60;UBERON:0007500!2.89e-14!60;UBERON:0004537!2.89e-14!60;UBERON:0006965!2.89e-14!60;UBERON:0004535!1.87e-12!110;UBERON:0002204!7.70e-12!167;UBERON:0001009!9.15e-12!113;UBERON:0005256!5.52e-10!143;UBERON:0003081!1.66e-09!216;UBERON:0000926!4.05e-09!448;UBERON:0004120!4.05e-09!448;UBERON:0006603!4.05e-09!448;UBERON:0003914!7.55e-09!118;UBERON:0000490!8.19e-08!138;UBERON:0001135!4.69e-07!15;UBERON:0003498!4.80e-07!5;UBERON:0005985!4.80e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.61e-24;33!UBERON:0004571;5.61e-24;33!UBERON:0001637;1.16e-17;42!UBERON:0003509;1.16e-17;42!UBERON:0004572;1.16e-17;42!UBERON:0003834;7.48e-13;5!UBERON:0001533;7.48e-13;5!UBERON:0004237;7.91e-13;10!UBERON:0004695;7.91e-13;10!UBERON:0002111;7.91e-13;10!UBERON:0004178;7.91e-13;10!UBERON:0003513;3.53e-09;7!UBERON:0002456;6.23e-09;2!UBERON:0001529;6.86e-09;2!UBERON:0007204;6.86e-09;2!UBERON:0002119;6.99e-09;4!UBERON:0005396;2.04e-08;2!UBERON:0001135;2.52e-08;15!UBERON:0002049;3.45e-08;75!UBERON:0007798;3.45e-08;75!UBERON:0007500;3.68e-08;56!UBERON:0001981;3.68e-08;56!UBERON:0004537;3.68e-08;56!UBERON:0000055;6.68e-08;65!UBERON:0000948;3.65e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.29e-25,33;UBERON:0004571,1.29e-25,33;UBERON:0001637,7.70e-25,42;UBERON:0003509,7.70e-25,42;UBERON:0004572,7.70e-25,42;UBERON:0004872,5.95e-20,83;UBERON:0000055,3.09e-19,68;UBERON:0007500,2.31e-18,59;UBERON:0001981,2.31e-18,59;UBERON:0004537,2.31e-18,59;UBERON:0006965,2.31e-18,59;UBERON:0002049,9.42e-18,78;UBERON:0007798,9.42e-18,78;UBERON:0004535,1.20e-16,109;UBERON:0000486,2.78e-16,83;UBERON:0001009,4.99e-16,112;UBERON:0001134,2.35e-15,62;UBERON:0002036,2.35e-15,62;UBERON:0003082,2.35e-15,62;UBERON:0002385,9.80e-15,64;UBERON:0001015,9.80e-15,64;UBERON:0000383,9.80e-15,64;UBERON:0002329,1.81e-14,71;UBERON:0003059,1.81e-14,71;UBERON:0007282,1.81e-14,71;UBERON:0004290,1.81e-14,71;UBERON:0009618,1.81e-14,71;UBERON:0003077,3.34e-14,72;UBERON:0007285,3.34e-14,72;UBERON:0007524,6.06e-14,73;UBERON:0004237,6.31e-13,10;UBERON:0004695,6.31e-13,10;UBERON:0002111,6.31e-13,10;UBERON:0004178,6.31e-13,10;UBERON:0003834,7.31e-13,5;UBERON:0001533,7.31e-13,5;UBERON:0007503,9.44e-13,78;UBERON:0002204,2.06e-11,167;UBERON:0003914,3.36e-11,117;UBERON:0003081,6.23e-10,203;UBERON:0003513,3.47e-09,7;UBERON:0002119,5.14e-09,4;UBERON:0001529,6.26e-09,2;UBERON:0007204,6.26e-09,2;UBERON:0002456,7.02e-09,2;UBERON:0000948,1.34e-08,24;UBERON:0005498,1.34e-08,24;UBERON:0004140,1.34e-08,24;UBERON:0009881,1.34e-08,24;UBERON:0004141,1.34e-08,24;UBERON:0003084,1.34e-08,24;UBERON:0007005,1.34e-08,24;UBERON:0004139,1.34e-08,24;UBERON:0004291,1.34e-08,24;UBERON:0001135,2.18e-08,15;UBERON:0005396,2.51e-08,2;UBERON:0000926,5.40e-08,315;UBERON:0004120,5.40e-08,315;UBERON:0006603,5.40e-08,315;UBERON:0007100,1.70e-07,27;UBERON:0005256,1.90e-07,122;UBERON:0003498,2.21e-07,5;UBERON:0005985,2.21e-07,5 | |||
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|short_description=p@chr4:74735431..74735449,+ | |short_description=p@chr4:74735431..74735449,+ | ||
}} | }} |
Latest revision as of 06:44, 30 July 2015
Short description: | p@chr4:74735431..74735449, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74735431..74735449, + |
Coexpression cluster: | C773_Smooth_mesenchymal_Hair_Lymphatic_Preadipocyte_Aortic_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.60e-34 | 32 |
smooth muscle cell | 3.73e-24 | 43 |
smooth muscle myoblast | 3.73e-24 | 43 |
muscle cell | 6.98e-18 | 55 |
muscle precursor cell | 1.01e-16 | 58 |
myoblast | 1.01e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-16 | 58 |
electrically responsive cell | 1.11e-15 | 61 |
electrically active cell | 1.11e-15 | 61 |
aortic smooth muscle cell | 6.31e-13 | 10 |
smooth muscle cell of the subclavian artery | 7.31e-13 | 5 |
neutrophil | 3.59e-12 | 3 |
mesodermal cell | 7.95e-12 | 121 |
cardiac mesenchymal cell | 3.60e-09 | 4 |
migratory trunk neural crest cell | 3.60e-09 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 6.26e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 7.02e-09 | 2 |
smooth muscle cell of the carotid artery | 2.51e-08 | 2 |
multi fate stem cell | 4.23e-08 | 427 |
somatic stem cell | 7.58e-08 | 433 |
cardiocyte | 8.38e-08 | 16 |
granulocyte | 1.27e-07 | 8 |
stem cell | 1.61e-07 | 441 |