FFCP PHASE1:Hg19::chr6:73934119..73934140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:73934119..73934140,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr6:73934119..73934140,- | |description=CAGE_peak_at_chr6:73934119..73934140,- | ||
|id=chr6:73934119..73934140,- | |id=chr6:73934119..73934140,- | ||
|ontology_enrichment_celltype=CL:0000039!7.72e-19!7;CL:0000586!7.72e-19!7;CL:1000415!1.89e-11!2 | |ontology_enrichment_celltype=CL:0000039!7.72e-19!7;CL:0000586!7.72e-19!7;CL:1000415!1.89e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.39e-57;7!CL:0000586;6.39e-57;7!CL:1000415;9.40e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.16e-57,7;CL:0000586,5.16e-57,7;CL:1000415,9.40e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.52e-40;10!UBERON:0005564;4.52e-40;10 | |||
|ontology_enrichment_disease=DOID:1749!4.17e-17!14;DOID:305!4.78e-09!106;DOID:0050687!1.12e-07!143 | |ontology_enrichment_disease=DOID:1749!4.17e-17!14;DOID:305!4.78e-09!106;DOID:0050687!1.12e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.49e-18;22!DOID:2994;1.49e-18;22!DOID:1749;1.79e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.39e-18,22;DOID:2994,1.39e-18,22;DOID:1749,1.93e-16,14;DOID:305,5.98e-15,106;DOID:0050687,4.45e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0000369!3.07e-12!4;UBERON:0002435!3.07e-12!4;UBERON:0000204!3.07e-12!4;UBERON:0010082!3.07e-12!4;UBERON:0003343!8.50e-12!4;UBERON:0004785!8.50e-12!4;UBERON:0000473!3.95e-11!8;UBERON:0002780!6.95e-10!41;UBERON:0001890!6.95e-10!41;UBERON:0006240!6.95e-10!41;UBERON:0003080!1.30e-09!42;UBERON:0003729!1.56e-09!5;UBERON:0000349!1.56e-09!5;UBERON:0002420!3.05e-09!9;UBERON:0007245!3.05e-09!9;UBERON:0010009!3.05e-09!9;UBERON:0010011!3.05e-09!9;UBERON:0000454!3.05e-09!9;UBERON:0001869!2.33e-08!32;UBERON:0004176!2.71e-08!22;UBERON:0003135!4.22e-08!11;UBERON:0002791!4.44e-08!33;UBERON:0002110!6.57e-08!3;UBERON:0006242!6.57e-08!3;UBERON:0002020!8.17e-08!34;UBERON:0003528!8.17e-08!34;UBERON:0001893!8.17e-08!34;UBERON:0005383!8.34e-08!3;UBERON:0005382!8.34e-08!3;UBERON:0009663!3.52e-07!7 | |ontology_enrichment_uberon=UBERON:0000369!3.07e-12!4;UBERON:0002435!3.07e-12!4;UBERON:0000204!3.07e-12!4;UBERON:0010082!3.07e-12!4;UBERON:0003343!8.50e-12!4;UBERON:0004785!8.50e-12!4;UBERON:0000473!3.95e-11!8;UBERON:0002780!6.95e-10!41;UBERON:0001890!6.95e-10!41;UBERON:0006240!6.95e-10!41;UBERON:0003080!1.30e-09!42;UBERON:0003729!1.56e-09!5;UBERON:0000349!1.56e-09!5;UBERON:0002420!3.05e-09!9;UBERON:0007245!3.05e-09!9;UBERON:0010009!3.05e-09!9;UBERON:0010011!3.05e-09!9;UBERON:0000454!3.05e-09!9;UBERON:0001869!2.33e-08!32;UBERON:0004176!2.71e-08!22;UBERON:0003135!4.22e-08!11;UBERON:0002791!4.44e-08!33;UBERON:0002110!6.57e-08!3;UBERON:0006242!6.57e-08!3;UBERON:0002020!8.17e-08!34;UBERON:0003528!8.17e-08!34;UBERON:0001893!8.17e-08!34;UBERON:0005383!8.34e-08!3;UBERON:0005382!8.34e-08!3;UBERON:0009663!3.52e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.65e-50;8!UBERON:0003135;1.71e-36;11!UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0000991;2.06e-19;21!UBERON:0003101;1.49e-18;22!UBERON:0000079;1.49e-18;22!UBERON:0002323;2.87e-13;45!UBERON:0003133;1.23e-10;44!UBERON:0002110;1.30e-09;3!UBERON:0004458;1.57e-07;48!UBERON:0002553;3.89e-07;52!UBERON:0000922;4.53e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.51e-50,8;UBERON:0003135,1.49e-36,11;UBERON:0004176,2.08e-28,22;UBERON:0000997,9.79e-26,1;UBERON:0005056,9.79e-26,1;UBERON:0000991,1.92e-19,21;UBERON:0009196,1.92e-19,21;UBERON:0009117,1.92e-19,21;UBERON:0005564,1.92e-19,21;UBERON:0003101,1.39e-18,22;UBERON:0000079,1.39e-18,22;UBERON:0002323,8.28e-14,46;UBERON:0003133,3.28e-13,48;UBERON:0004458,5.58e-13,49;UBERON:0003886,8.40e-12,54;UBERON:0005156,8.54e-11,59;UBERON:0000990,8.54e-11,59;UBERON:0002553,1.79e-10,61;UBERON:0002110,1.30e-09,3;UBERON:0006242,1.30e-09,3 | |||
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|short_description=p@chr6:73934119..73934140,- | |short_description=p@chr6:73934119..73934140,- | ||
}} | }} |
Latest revision as of 03:04, 31 July 2015
Short description: | p@chr6:73934119..73934140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:73934119..73934140, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.16e-57 | 7 |
germ cell | 5.16e-57 | 7 |
epithelial cell of gall bladder | 9.40e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 5.51e-50 | 8 |
male reproductive organ | 1.49e-36 | 11 |
external genitalia | 2.08e-28 | 22 |
mammalian vulva | 9.79e-26 | 1 |
external female genitalia | 9.79e-26 | 1 |
gonad | 1.92e-19 | 21 |
indifferent external genitalia | 1.92e-19 | 21 |
indifferent gonad | 1.92e-19 | 21 |
gonad primordium | 1.92e-19 | 21 |
male organism | 1.39e-18 | 22 |
male reproductive system | 1.39e-18 | 22 |
body cavity | 8.28e-14 | 46 |
reproductive organ | 3.28e-13 | 48 |
body cavity or lining | 5.58e-13 | 49 |
body cavity precursor | 8.40e-12 | 54 |
reproductive structure | 8.54e-11 | 59 |
reproductive system | 8.54e-11 | 59 |
anatomical cavity | 1.79e-10 | 61 |
gallbladder | 1.30e-09 | 3 |
gall bladder primordium | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.39e-18 | 22 |
germ cell cancer | 1.39e-18 | 22 |
squamous cell carcinoma | 1.93e-16 | 14 |
carcinoma | 5.98e-15 | 106 |
cell type cancer | 4.45e-11 | 143 |