FFCP PHASE1:Hg19::chr19:46272106..46272115,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:46272106..46272115,-
|short_description=p3@SIX5
|description=CAGE_peak_3_at_SIX5_5end
|association_with_transcript=0bp_to_ENST00000560168_5end
|EntrezGen...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147912 | |EntrezGene=147912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10891 | |HGNC=10891 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560168_5end | |||
|cluster_id=chr19:46272106..46272115,- | |||
|description=CAGE_peak_3_at_SIX5_5end | |||
|id=chr19:46272106..46272115,- | |||
|ontology_enrichment_celltype=CL:0000055!6.52e-08!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!5.81e-13!238;UBERON:0009142!5.81e-13!238;UBERON:0002100!1.95e-12!216;UBERON:0004119!4.92e-11!169;UBERON:0000925!4.92e-11!169;UBERON:0006595!4.92e-11!169;UBERON:0001007!2.34e-09!155;UBERON:0001555!2.34e-09!155;UBERON:0007026!2.34e-09!155;UBERON:0009569!4.70e-09!113;UBERON:0000466!1.63e-08!126;UBERON:0000077!2.18e-08!130;UBERON:0000481!2.77e-08!347;UBERON:0000475!2.87e-08!365;UBERON:0005256!3.27e-08!143;UBERON:0000468!8.55e-08!659;UBERON:0000464!1.61e-07!104;UBERON:0003914!1.79e-07!118;UBERON:0004921!4.77e-07!129;UBERON:0004185!4.77e-07!129;UBERON:0005177!9.11e-07!107 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.15e-10,199;UBERON:0004119,8.18e-10,160;UBERON:0000925,8.18e-10,160;UBERON:0006595,8.18e-10,160;UBERON:0003104,4.69e-09,160;UBERON:0009142,4.69e-09,160;UBERON:0009569,6.01e-08,112;UBERON:0001007,6.38e-08,145;UBERON:0001555,6.38e-08,145;UBERON:0007026,6.38e-08,145;UBERON:0005256,6.38e-08,122 | |||
|phase1_expression=2.36181893051724,4.49611100171065,3.38290569830331,2.00146596706261,2.68176656656373,0,5.06599756336621,5.05375898741465,4.17897005119742,1.96587149201207,4.88460817580699,1.52908960491121,2.63766978228454,6.31208400096238,3.97676850873499,1.34465029290355,1.20538905604795,1.46062018077475,1.46379839637152,2.21617904538218,2.24400760368678,3.13454721478088,2.0036519099174,0.821246550437305,1.00434111675842,0.993374274723366,0.57470412614962,0.472264687882075,0,0,0.154816123316076,2.75826367343678,1.50602959389125,2.21852406100073,0,0,0,0,0,0,0,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.790152254325231,0,0,0,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0,0,0,0.128091319725675,0,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,12.1903433156981,7.37770945674,1.66221330396589,1.44575660953827,4.01070328508712,4.49024208778554,0,9.24606253575008,0.756278537312543,1.33037638477538,1.05401742831751,3.40545596294053,6.55731518926576,5.19098219898201,0.649094787309367,0.348259474598534,1.06366368415092,0,0,0,1.59009925893364,0.860234595106124,2.42998351125316,2.26123176769604,0.838998872419812,2.20094433552054,2.29894463190492,0.516833518338658,0.71153252537342,0.66944122552934,1.61131726843659,2.28081631715554,5.85748938115607,0.735326160691737,2.43042584364528,1.96459402224975,3.14341121676638,1.46394924628319,3.06633274931766,0.949265659568129,1.46561395144326,0,0,5.23312862571041,1.98788780678127,1.64619665163954,2.25095607382472,1.14734648299525,1.77334191099179,0,5.33744978648525,2.4666754841716,1.24484414159907,1.61652806483626,1.47115712802113,1.36221684880438,2.88087962239999,2.81185718200556,1.87296046098192,0.570471821544449,1.94283284717341,2.11382097558777,1.13311061057692,1.54495887372473,2.44985005505872,1.35117749042945,3.61640234115179,2.37600571456411,3.4617370098998,10.0117749813183,6.46756327634615,2.35670559535693,3.37820003654303,1.10825646193673,2.19488810440419,1.83892677479412,3.90618953157152,1.58805056424029,1.97328599257748,3.63047560991565,2.33125091275518,1.20036438433761,1.8549455262919,2.57640540045629,2.41951913231067,3.03797398034279,2.24105111870757,2.27190396819703,3.68199594569197,1.77810662500693,2.4850671476163,0.906768884048762,1.86516651541536,0.966304265816484,1.09098448236334,0.286804595389004,3.29329006549908,1.85541675650079,2.09149097165133,1.55491582523056,2.77552935963191,1.45990943630332,0,3.21620469096443,1.38134921352481,5.10804720835177,4.33127689001751,3.07597680103594,2.02301628093722,2.16909926895134,1.43382164552112,4.13970943775572,2.60997681022206,1.21348177344148,1.56977172100277,1.15424147083917,0,2.80483547606892,3.7041661019826,10.2906097969879,2.53510069643662,2.94848165003288,5.31710916013264,1.32438929824395,2.21379189377604,1.71567810298526,2.63400684980701,1.1240175325762,2.31216636546751,4.62942225792648,2.6064664424826,1.03993478527958,1.44331342025273,0.811512834825538,1.52631302506568,3.3204282985047,4.62985512576611,2.09279567458058,5.53143078571493,9.4433477830436,0.246217006087397,0.234004265139238,0.148631162288728,1.87467667973554,0.839910640994298,0.850650583454319,1.79117045405697,2.61570544662566,1.53353071666084,0,1.76096868026452,8.70778085271243,11.6737162267739,9.59442494040488,1.33345578013555,1.52795370223311,2.34434894420094,1.71072446022705,0.411309970813294,0.901029173531752,1.71495859578347,0.897048674762886,0.43596006883328,0.8800594298514,0.517086863031111,50.0719024192635,5.071816515336,0.797814349754612,2.08014873822732,2.05765899409714,1.41849132023278,2.39779961114489,3.28849385413739,6.51145926469732,4.93944202068461,2.28015329005615,4.97548728239564,1.58390374586686,1.20575750823834,0,1.19967589418468,0,0,2.10833939483032,0.239624855491583,6.89171615004683,0,1.59259437334337,0.821905290201534,0.716243852959582,0.112085143993527,0,0,0,1.27047312111232,0,0,0.670065061337395,0,0,0,0,7.85225547002495,7.00238729483548,1.08506009479894,1.87173775377726,1.60586089917446,1.41932173530541,3.63138386477411,5.11608369537122,6.82222512167955,5.17365356462525,1.32845119707087,3.50301420229236,3.5622281931914,4.69922777910577,1.71571711905428,0,0,0.106727557803444,3.33440328590885,8.32177197552485,6.95497674658265,1.98486246255021,1.68808170616869,4.2099014164961,2.81906128362542,2.04682899626681,2.2519548960105,0,3.39261326365842,2.66342587969691,3.20295908453856,2.59627214591811,1.97557643381931,0.966875596732978,0.40101294060657,2.3941057123333,2.52591785962135,2.00300284807389,2.88473712910733,2.70719767744447,1.07821471946181,3.13739907670742,0,1.68882606228601,3.4120015221269,1.70093705276516,2.15915916102139,4.62681758070868,2.98041081298238,4.01351819083883,0.764628819135115,0.831076008928724,1.34324852833307,0,0,1.28225062558195,0.984043937099117,0.976135183992909,2.5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| ||
|short_description=p3@SIX5 | |||
}} | }} |
Latest revision as of 19:12, 18 September 2015
Short description: | p3@SIX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560168_5end |
EntrezGene: | SIX5 |
HGNC: | 10891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 1.15e-10 | 199 |
endoderm-derived structure | 8.18e-10 | 160 |
endoderm | 8.18e-10 | 160 |
presumptive endoderm | 8.18e-10 | 160 |
mesenchyme | 4.69e-09 | 160 |
entire embryonic mesenchyme | 4.69e-09 | 160 |
subdivision of trunk | 6.01e-08 | 112 |
digestive system | 6.38e-08 | 145 |
digestive tract | 6.38e-08 | 145 |
primitive gut | 6.38e-08 | 145 |
trunk mesenchyme | 6.38e-08 | 122 |