FFCP PHASE1:Hg19::chr9:132934622..132934699,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23413 | |EntrezGene=23413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3953 | |HGNC=3953 | ||
|TSSclassifier=strong | |||
|UniProt=P62166 | |UniProt=P62166 | ||
|association_with_transcript=-157bp_to_ENST00000372398,NM_014286,uc004bzi.2_5end | |association_with_transcript=-157bp_to_ENST00000372398,NM_014286,uc004bzi.2_5end | ||
|cluster_id=chr9:132934622..132934699,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_NCS1_5end | |description=CAGE_peak_1_at_NCS1_5end | ||
|id=chr9:132934622..132934699,+ | |id=chr9:132934622..132934699,+ | ||
|ontology_enrichment_celltype=CL:0000220!2.39e-19!246;CL:0002321!3.31e-19!248;CL:0000055!1.72e-17!180;CL:0000222!3.00e-14!119;CL:0000183!8.75e-11!59;CL:0000393!1.75e-09!60;CL:0000211!1.75e-09!60;CL:0000221!2.12e-09!71;CL:0000680!3.61e-09!57;CL:0000056!3.61e-09!57;CL:0000355!3.61e-09!57;CL:0000187!5.32e-09!54;CL:0000133!7.49e-08!59;CL:1000449!9.36e-08!16;CL:1000497!9.89e-08!18;CL:0002518!9.89e-08!18;CL:0000333!1.06e-07!41;CL:0000192!1.19e-07!42;CL:0000514!1.19e-07!42 | |ontology_enrichment_celltype=CL:0000220!2.39e-19!246;CL:0002321!3.31e-19!248;CL:0000055!1.72e-17!180;CL:0000222!3.00e-14!119;CL:0000183!8.75e-11!59;CL:0000393!1.75e-09!60;CL:0000211!1.75e-09!60;CL:0000221!2.12e-09!71;CL:0000680!3.61e-09!57;CL:0000056!3.61e-09!57;CL:0000355!3.61e-09!57;CL:0000187!5.32e-09!54;CL:0000133!7.49e-08!59;CL:1000449!9.36e-08!16;CL:1000497!9.89e-08!18;CL:0002518!9.89e-08!18;CL:0000333!1.06e-07!41;CL:0000192!1.19e-07!42;CL:0000514!1.19e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.12e-08;15!CL:1000497;3.78e-08;17!CL:0002518;3.78e-08;17!CL:1000507;7.99e-07;10!CL:1000494;7.99e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.87e-19,250;CL:0000222,2.06e-14,121;CL:0000393,2.41e-09,61;CL:0000211,2.41e-09,61;CL:0000221,3.49e-09,72;CL:0000680,5.02e-09,58;CL:0000056,5.02e-09,58;CL:0000355,5.02e-09,58;CL:0000187,7.47e-09,55;CL:1000449,3.28e-08,15;CL:1000497,3.91e-08,17;CL:0002518,3.91e-08,17;CL:0000133,7.41e-08,59;CL:0000333,1.04e-07,41;CL:0000192,1.71e-07,43;CL:0000514,1.71e-07,43;CL:1000507,8.09e-07,10;CL:1000494,8.09e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.25e-32!312;UBERON:0000483!1.43e-31!309;UBERON:0000475!4.48e-25!365;UBERON:0003075!1.22e-24!86;UBERON:0007284!1.22e-24!86;UBERON:0000073!7.13e-24!94;UBERON:0001016!7.13e-24!94;UBERON:0005743!5.68e-23!86;UBERON:0002346!6.84e-23!90;UBERON:0004121!4.78e-22!169;UBERON:0001017!6.97e-22!82;UBERON:0001049!2.04e-21!57;UBERON:0005068!2.04e-21!57;UBERON:0006241!2.04e-21!57;UBERON:0007135!2.04e-21!57;UBERON:0000025!4.13e-21!194;UBERON:0000924!4.47e-21!173;UBERON:0006601!4.47e-21!173;UBERON:0000481!5.13e-21!347;UBERON:0003056!6.99e-21!61;UBERON:0000033!9.57e-21!123;UBERON:0000955!2.32e-20!69;UBERON:0006238!2.32e-20!69;UBERON:0002050!2.38e-20!605;UBERON:0005423!2.38e-20!605;UBERON:0000922!2.70e-20!612;UBERON:0000923!4.43e-20!604;UBERON:0005291!4.43e-20!604;UBERON:0006598!4.43e-20!604;UBERON:0002532!4.43e-20!604;UBERON:0000468!1.31e-19!659;UBERON:0002616!1.45e-19!59;UBERON:0001869!3.66e-19!32;UBERON:0004111!6.08e-19!241;UBERON:0000467!7.82e-19!625;UBERON:0002020!1.03e-18!34;UBERON:0003528!1.03e-18!34;UBERON:0001893!1.64e-18!34;UBERON:0000480!2.00e-18!626;UBERON:0002791!7.56e-18!33;UBERON:0000153!1.77e-17!129;UBERON:0007811!1.77e-17!129;UBERON:0002780!8.64e-17!41;UBERON:0001890!8.64e-17!41;UBERON:0006240!8.64e-17!41;UBERON:0000477!2.92e-16!286;UBERON:0003080!6.70e-16!42;UBERON:0000956!2.11e-15!25;UBERON:0000203!2.11e-15!25;UBERON:0002619!1.18e-14!22;UBERON:0000064!2.21e-14!219;UBERON:0001950!2.47e-13!20;UBERON:0005256!5.29e-11!143;UBERON:0000914!1.38e-10!83;UBERON:0002329!1.38e-10!83;UBERON:0003077!1.38e-10!83;UBERON:0003059!1.38e-10!83;UBERON:0007282!1.38e-10!83;UBERON:0009618!1.38e-10!83;UBERON:0007285!1.38e-10!83;UBERON:0000486!1.91e-10!82;UBERON:0004290!1.65e-09!70;UBERON:0002385!5.75e-08!63;UBERON:0001015!5.75e-08!63;UBERON:0000383!5.75e-08!63;UBERON:0001134!6.27e-08!61;UBERON:0002036!6.27e-08!61;UBERON:0003082!6.27e-08!61;UBERON:0000062!8.01e-08!511;UBERON:0004211!9.36e-08!16;UBERON:0001285!9.36e-08!16;UBERON:0007684!9.36e-08!16;UBERON:0003220!9.36e-08!16;UBERON:0004208!9.36e-08!16;UBERON:0002049!9.66e-08!79;UBERON:0007798!9.66e-08!79;UBERON:0001008!1.50e-07!45;UBERON:0003914!1.52e-07!118;UBERON:0006554!1.56e-07!44;UBERON:0002100!2.82e-07!216;UBERON:0006555!3.33e-07!17;UBERON:0005103!3.33e-07!17;UBERON:0000083!3.33e-07!17;UBERON:0009201!3.33e-07!17;UBERON:0004819!3.33e-07!17;UBERON:0006553!3.33e-07!17;UBERON:0003074!3.33e-07!17;UBERON:0003060!3.33e-07!17;UBERON:0000489!3.48e-07!32;UBERON:0001637!3.56e-07!42;UBERON:0003509!3.56e-07!42;UBERON:0004572!3.56e-07!42;UBERON:0000080!4.87e-07!18;UBERON:0002120!4.87e-07!18;UBERON:0004875!4.87e-07!18;UBERON:0005721!4.87e-07!18;UBERON:0005754!4.87e-07!18;UBERON:0007297!4.87e-07!18;UBERON:0001981!7.69e-07!60;UBERON:0007500!7.69e-07!60;UBERON:0004537!7.69e-07!60;UBERON:0006965!7.69e-07!60;UBERON:0003076!9.17e-07!15;UBERON:0003057!9.17e-07!15 | |ontology_enrichment_uberon=UBERON:0000119!3.25e-32!312;UBERON:0000483!1.43e-31!309;UBERON:0000475!4.48e-25!365;UBERON:0003075!1.22e-24!86;UBERON:0007284!1.22e-24!86;UBERON:0000073!7.13e-24!94;UBERON:0001016!7.13e-24!94;UBERON:0005743!5.68e-23!86;UBERON:0002346!6.84e-23!90;UBERON:0004121!4.78e-22!169;UBERON:0001017!6.97e-22!82;UBERON:0001049!2.04e-21!57;UBERON:0005068!2.04e-21!57;UBERON:0006241!2.04e-21!57;UBERON:0007135!2.04e-21!57;UBERON:0000025!4.13e-21!194;UBERON:0000924!4.47e-21!173;UBERON:0006601!4.47e-21!173;UBERON:0000481!5.13e-21!347;UBERON:0003056!6.99e-21!61;UBERON:0000033!9.57e-21!123;UBERON:0000955!2.32e-20!69;UBERON:0006238!2.32e-20!69;UBERON:0002050!2.38e-20!605;UBERON:0005423!2.38e-20!605;UBERON:0000922!2.70e-20!612;UBERON:0000923!4.43e-20!604;UBERON:0005291!4.43e-20!604;UBERON:0006598!4.43e-20!604;UBERON:0002532!4.43e-20!604;UBERON:0000468!1.31e-19!659;UBERON:0002616!1.45e-19!59;UBERON:0001869!3.66e-19!32;UBERON:0004111!6.08e-19!241;UBERON:0000467!7.82e-19!625;UBERON:0002020!1.03e-18!34;UBERON:0003528!1.03e-18!34;UBERON:0001893!1.64e-18!34;UBERON:0000480!2.00e-18!626;UBERON:0002791!7.56e-18!33;UBERON:0000153!1.77e-17!129;UBERON:0007811!1.77e-17!129;UBERON:0002780!8.64e-17!41;UBERON:0001890!8.64e-17!41;UBERON:0006240!8.64e-17!41;UBERON:0000477!2.92e-16!286;UBERON:0003080!6.70e-16!42;UBERON:0000956!2.11e-15!25;UBERON:0000203!2.11e-15!25;UBERON:0002619!1.18e-14!22;UBERON:0000064!2.21e-14!219;UBERON:0001950!2.47e-13!20;UBERON:0005256!5.29e-11!143;UBERON:0000914!1.38e-10!83;UBERON:0002329!1.38e-10!83;UBERON:0003077!1.38e-10!83;UBERON:0003059!1.38e-10!83;UBERON:0007282!1.38e-10!83;UBERON:0009618!1.38e-10!83;UBERON:0007285!1.38e-10!83;UBERON:0000486!1.91e-10!82;UBERON:0004290!1.65e-09!70;UBERON:0002385!5.75e-08!63;UBERON:0001015!5.75e-08!63;UBERON:0000383!5.75e-08!63;UBERON:0001134!6.27e-08!61;UBERON:0002036!6.27e-08!61;UBERON:0003082!6.27e-08!61;UBERON:0000062!8.01e-08!511;UBERON:0004211!9.36e-08!16;UBERON:0001285!9.36e-08!16;UBERON:0007684!9.36e-08!16;UBERON:0003220!9.36e-08!16;UBERON:0004208!9.36e-08!16;UBERON:0002049!9.66e-08!79;UBERON:0007798!9.66e-08!79;UBERON:0001008!1.50e-07!45;UBERON:0003914!1.52e-07!118;UBERON:0006554!1.56e-07!44;UBERON:0002100!2.82e-07!216;UBERON:0006555!3.33e-07!17;UBERON:0005103!3.33e-07!17;UBERON:0000083!3.33e-07!17;UBERON:0009201!3.33e-07!17;UBERON:0004819!3.33e-07!17;UBERON:0006553!3.33e-07!17;UBERON:0003074!3.33e-07!17;UBERON:0003060!3.33e-07!17;UBERON:0000489!3.48e-07!32;UBERON:0001637!3.56e-07!42;UBERON:0003509!3.56e-07!42;UBERON:0004572!3.56e-07!42;UBERON:0000080!4.87e-07!18;UBERON:0002120!4.87e-07!18;UBERON:0004875!4.87e-07!18;UBERON:0005721!4.87e-07!18;UBERON:0005754!4.87e-07!18;UBERON:0007297!4.87e-07!18;UBERON:0001981!7.69e-07!60;UBERON:0007500!7.69e-07!60;UBERON:0004537!7.69e-07!60;UBERON:0006965!7.69e-07!60;UBERON:0003076!9.17e-07!15;UBERON:0003057!9.17e-07!15 | ||
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| ||
|short_description=p1@NCS1 | |short_description=p1@NCS1 | ||
}} | }} |
Latest revision as of 00:29, 16 September 2015
Short description: | p1@NCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCS1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -157bp_to_ENST00000372398, NM_014286, uc004bzi.2_5end |
EntrezGene: | NCS1 |
HGNC: | 3953 |
UniProt: | P62166 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.87e-19 | 250 |
mesodermal cell | 2.06e-14 | 121 |
electrically responsive cell | 2.41e-09 | 61 |
electrically active cell | 2.41e-09 | 61 |
ectodermal cell | 3.49e-09 | 72 |
muscle precursor cell | 5.02e-09 | 58 |
myoblast | 5.02e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.02e-09 | 58 |
muscle cell | 7.47e-09 | 55 |
epithelial cell of nephron | 3.28e-08 | 15 |
kidney cell | 3.91e-08 | 17 |
kidney epithelial cell | 3.91e-08 | 17 |
neurectodermal cell | 7.41e-08 | 59 |
migratory neural crest cell | 1.04e-07 | 41 |
smooth muscle cell | 1.71e-07 | 43 |
smooth muscle myoblast | 1.71e-07 | 43 |
kidney tubule cell | 8.09e-07 | 10 |
nephron tubule epithelial cell | 8.09e-07 | 10 |