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{{UBERON
{{UBERON
|id=UBERON:0003509
|alt_id=
|name=arterial blood vessel
|namespace=
|def="A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta." [UBERON:cjm]
|xref=MA:0000061
|is_a=UBERON:0001981
|synonym=
|comment=only in MA - supertype of artery, arteriole, aorta.
|comment=only in MA - supertype of artery, arteriole, aorta.
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta." [UBERON:cjm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003509
|is_a=UBERON:0001981
|is_obsolete=
|located_in=
|located_in=
|name=arterial blood vessel
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0004572
|part_of=UBERON:0004572
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=MA:0000061
}}
}}

Latest revision as of 17:40, 12 September 2014

Name:arterial blood vessel
Namespace:FANTOM
Definition:"A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta." [UBERON:cjm]
Xrefs:
links:
MA:0000061
Comments:only in MA - supertype of artery, arteriole, aorta.

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001981(blood vessel)
part_of:UBERON:0004572(arterial system)



Children

is a:UBERON:0000947 (aorta),UBERON:0001637 (artery),UBERON:0003643 (respiratory system arterial blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003509 (arterial blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.46e-86FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_cab3c7602ac197c2a2456aa390637677p6@Npy1r
1.46e-86FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_cab3c7602ac197c2a2456aa390637677p6@Npy1r
6.62e-84FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_9af3e557e9f16300bbd1b3414bd73812p2@SOX17
6.62e-84FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_9af3e557e9f16300bbd1b3414bd73812p2@SOX17
5.83e-77FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_0c1ca3a5548faff72af12de5660b2667p1@ENST00000439823
5.83e-77FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_0c1ca3a5548faff72af12de5660b2667p1@ENST00000439823
6.68e-73FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_0a02d5bd4467e76c5311924e880d6befp4@MMP1
6.68e-73FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_0a02d5bd4467e76c5311924e880d6befp4@MMP1
9.34e-73FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_68ead0d499735446dde0eb2b3c6261e9p@chr4:7846444..7846449, -
9.34e-73FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_68ead0d499735446dde0eb2b3c6261e9p@chr4:7846444..7846449, -
1.67e-71FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_01a33ac63e9a6b282915c7604b2c90e3p@chr6:53359400..53359406, +
1.67e-71FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_01a33ac63e9a6b282915c7604b2c90e3p@chr6:53359400..53359406, +
8.51e-71FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_8d9b262197f6d601284802dc14a9b774p4@SULT1B1
8.51e-71FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_8d9b262197f6d601284802dc14a9b774p4@SULT1B1
1.15e-70FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_a132d7ffe9a4c91a7f3cbe4226814c88p@chr22:21138313..21138336, +
1.15e-70FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_a132d7ffe9a4c91a7f3cbe4226814c88p@chr22:21138313..21138336, +
1.58e-70FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_d28f4116bcc07595f056cd32a6dba344p3@SULT1B1
1.58e-70FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_d28f4116bcc07595f056cd32a6dba344p3@SULT1B1
2.66e-70FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_a338c045a4b655ea4eb60708c5b47530p@chr11:102667477..102667490, -
2.66e-70FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_a338c045a4b655ea4eb60708c5b47530p@chr11:102667477..102667490, -
7.36e-70FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_2645d7744a4ea8f13254ee188ddc82b6p5@Npy1r
7.36e-70FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_2645d7744a4ea8f13254ee188ddc82b6p5@Npy1r
9.2e-70FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_9dad0f5805c0724b314287af3b0ac763p@chr11:102661517..102661541, -
9.2e-70FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_9dad0f5805c0724b314287af3b0ac763p@chr11:102661517..102661541, -
2.47e-69FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_cd4dae2ee463e0f71a7864c79bc23fb3p@chr2:65009852..65009866, -
2.47e-69FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_cd4dae2ee463e0f71a7864c79bc23fb3p@chr2:65009852..65009866, -
3.23e-69FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_1cabb81a0a451b48c542eccdebcd15b4p@chr4:54931911..54931926, -
3.23e-69FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_1cabb81a0a451b48c542eccdebcd15b4p@chr4:54931911..54931926, -
9.21e-69FFCP PHASE2:Hg19::chr14:23236579..23236596,+#_b28433e6336244143c6187d5fad4f8bcp5@OXA1L
9.21e-69FFCP PHASE1:Hg19::chr14:23236579..23236596,+#_b28433e6336244143c6187d5fad4f8bcp5@OXA1L
1.74e-68FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_4e9448a365e80d84c27f7b694523d7b7p@chr3:30334038..30334060, +
1.74e-68FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_4e9448a365e80d84c27f7b694523d7b7p@chr3:30334038..30334060, +
3.58e-68FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_e4c09410d4020ec7fa34da90474feee3p24@WWTR1
3.58e-68FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_e4c09410d4020ec7fa34da90474feee3p24@WWTR1
1.03e-67FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_29a9fa289a51159024b1dc0ca61e3024p@chr22:21138343..21138378, +
1.03e-67FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_29a9fa289a51159024b1dc0ca61e3024p@chr22:21138343..21138378, +
2.74e-67FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_d5cdd008a1309e32fc957626435b05aep3@MMP1
2.74e-67FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_d5cdd008a1309e32fc957626435b05aep3@MMP1
1.26e-66FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_bc35d486a9db6ed99a5078e75e2c4dc1p@chr11:102668178..102668206, +
1.26e-66FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_bc35d486a9db6ed99a5078e75e2c4dc1p@chr11:102668178..102668206, +
4.64e-66FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_97aefbe92c268b5b8a6f3637e7d51662p5@MMP1
4.64e-66FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_97aefbe92c268b5b8a6f3637e7d51662p5@MMP1
2.83e-65FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_5d23850f080890d6f55d1f02586d1821p@chr17:14802633..14802637, -
2.83e-65FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_5d23850f080890d6f55d1f02586d1821p@chr17:14802633..14802637, -
2.83e-65FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_5d23850f080890d6f55d1f02586d1821p5@Adamts2
2.83e-65FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_5d23850f080890d6f55d1f02586d1821p5@Adamts2
2.83e-65FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_5d23850f080890d6f55d1f02586d1821p@chr8:69228447..69228492, +
2.83e-65FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_5d23850f080890d6f55d1f02586d1821p@chr8:69228447..69228492, +
2.83e-65FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_5d23850f080890d6f55d1f02586d1821p@chr2:178190171..178190178, +
2.83e-65FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_5d23850f080890d6f55d1f02586d1821p@chr17:87574327..87574332, +
2.83e-65FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_5d23850f080890d6f55d1f02586d1821p@chr2:112043522..112043530, -
2.83e-65FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_5d23850f080890d6f55d1f02586d1821p@chrX:160839744..160839754, +
2.83e-65FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_5d23850f080890d6f55d1f02586d1821p@chrX:160839744..160839754, +
2.83e-65FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_5d23850f080890d6f55d1f02586d1821p@chr2:112043522..112043530, -
2.83e-65FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_5d23850f080890d6f55d1f02586d1821p@chr2:178190171..178190178, +
2.83e-65FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_5d23850f080890d6f55d1f02586d1821p@chr17:87574327..87574332, +
2.83e-65FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_5d23850f080890d6f55d1f02586d1821p@chr17:14827154..14827169, -
2.83e-65FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_5d23850f080890d6f55d1f02586d1821p@chr17:14827154..14827169, -
1.11e-64FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_29bce80b127ab63b7081661ece546009p@chr11:102668708..102668742, +
1.11e-64FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_29bce80b127ab63b7081661ece546009p@chr11:102668708..102668742, +
9.18e-63FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_268fe8285be62149c4655fe06984d63bp@chr11:102662162..102662217, -
9.18e-63FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_268fe8285be62149c4655fe06984d63bp@chr11:102662162..102662217, -
1.65e-60FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_0625afd617b760452fd106cab2ffeeb9p@chr12:96830430..96830450, +
1.65e-60FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_0625afd617b760452fd106cab2ffeeb9p@chr12:96830430..96830450, +
6.48e-58FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_2f3896c2c1998050ed67f60adb53d67cp@chr10:4823096..4823144, -
6.48e-58FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_2f3896c2c1998050ed67f60adb53d67cp@chr10:4823096..4823144, -
3.35e-57FFCP PHASE1:Hg19::chr11:102661061..102661115,-#_a4c20b4cadbf30ab1b908db2391e32d2p@chr11:102661061..102661115, -
3.35e-57FFCP PHASE2:Hg19::chr11:102661061..102661115,-#_a4c20b4cadbf30ab1b908db2391e32d2p@chr11:102661061..102661115, -
1.03e-56FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_8b71dacfb2c491615c6918757a6ec085p@chr3:106484411..106484418, +
1.03e-56FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_8b71dacfb2c491615c6918757a6ec085p@chr3:106484411..106484418, +
6.26e-56FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_a7887d43d7501bf416c611194c65cc21p2@ESM1
6.26e-56FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_a7887d43d7501bf416c611194c65cc21p2@ESM1
1.54e-55FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_70835dd04d082d45075a7d15ce221ba3p@chr2:134548872..134548879, -
1.54e-55FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_70835dd04d082d45075a7d15ce221ba3p@chr2:134548872..134548879, -
3.85e-55FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_648de057c3cdd609ed0b463ef96057e3p8@HHIP
3.85e-55FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_648de057c3cdd609ed0b463ef96057e3p8@HHIP
4.21e-55FFCP PHASE1:Hg19::chr11:102663449..102663467,-#_9b596238154f392900d83e9db63443acp@chr11:102663449..102663467, -
4.21e-55FFCP PHASE2:Hg19::chr11:102663449..102663467,-#_9b596238154f392900d83e9db63443acp@chr11:102663449..102663467, -
7.65e-55FFCP PHASE1:Hg19::chr11:102667434..102667447,-#_ec165681ec22adde91ab15d7c3de76c7p@chr11:102667434..102667447, -
7.65e-55FFCP PHASE2:Hg19::chr11:102667434..102667447,-#_ec165681ec22adde91ab15d7c3de76c7p@chr11:102667434..102667447, -
2.37e-54FFCP PHASE1:Hg19::chr15:39544232..39544238,+#_a051bb8cc63b411cb949568d4b3960ecp@chr15:39544232..39544238, +
2.37e-54FFCP PHASE2:Hg19::chr15:39544232..39544238,+#_a051bb8cc63b411cb949568d4b3960ecp@chr15:39544232..39544238, +
7.57e-54FFCP PHASE1:Hg19::chr11:102667504..102667527,-#_2d067e75d0a39687d82400e37485b3d4p@chr11:102667504..102667527, -
7.57e-54FFCP PHASE2:Hg19::chr11:102667504..102667527,-#_2d067e75d0a39687d82400e37485b3d4p@chr11:102667504..102667527, -
1.03e-53FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_04c04adcef33d1cc9eae561ce07d0ce1p@chr4:74703497..74703511, +
1.03e-53FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_04c04adcef33d1cc9eae561ce07d0ce1p@chr4:74703497..74703511, +
1.19e-53FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_15c1d89eb287f17d71c65097e6a74886p@chr4:54931877..54931892, -
1.19e-53FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_15c1d89eb287f17d71c65097e6a74886p@chr4:54931877..54931892, -
2.25e-53FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_77b7ced674424f8bf3c6a14c9266997ap@chr1:186946626..186946652, +
2.25e-53FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_77b7ced674424f8bf3c6a14c9266997ap@chr1:186946626..186946652, +
4.23e-52FFCP PHASE2:Hg19::chr4:145567538..145567544,+#_fb5273b2c23f57ab4741fb81771eedb3p13@HHIP
4.23e-52FFCP PHASE1:Hg19::chr4:145567538..145567544,+#_fb5273b2c23f57ab4741fb81771eedb3p13@HHIP
6.05e-52FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_34eb3e3883694d6b6c0f9c4a7911e103p8@MICAL2
6.05e-52FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_34eb3e3883694d6b6c0f9c4a7911e103p8@MICAL2
5.22e-51FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_1dba6ee10970b399546ac632efee792ep@chr8:90556171..90556173, +
5.22e-51FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_1dba6ee10970b399546ac632efee792ep@chr8:90556171..90556173, +
9.34e-51FFCP PHASE2:Mm9::chr17:75578018..75578028,+#_7665c6441283d66487706864792b3d5bp14@Ltbp1
9.34e-51FFCP PHASE1:Mm9::chr17:75578018..75578028,+#_7665c6441283d66487706864792b3d5bp14@Ltbp1
1.21e-50FFCP PHASE1:Hg19::chr2:228735763..228735772,+#_244542f2f28565bc8f8169deeafc578dp2@WDR69
1.21e-50FFCP PHASE2:Hg19::chr2:228735763..228735772,+#_244542f2f28565bc8f8169deeafc578dp2@WDR69

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