Personal tools

UBERON:0004256: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0004256
|alt_id=
|name=hindlimb zeugopod muscle
|namespace=
|def="A muscle organ that is part of a hindlimb zeugopod (lower leg) [Obol]." [OBOL:automatic]
|xref=FMA:22471;;MA:0000678
|is_a=UBERON:0003663
|synonym="lower leg muscle" EXACT [MA:0000678];;"muscle of leg" RELATED INCONSISTENT [FMA:22471]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A muscle organ that is part of a hindlimb zeugopod (lower leg) [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004256
|is_a=UBERON:0001383
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0003823
|name=hindlimb zeugopod muscle
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003823;;UBERON:0006067
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="lower leg muscle" EXACT [MA:0000678];;"muscle of leg" RELATED INCONSISTENT [FMA:22471]
|union_of=
|xref=FMA:22471;;MA:0000678
}}
}}

Latest revision as of 17:45, 12 September 2014

Name:hindlimb zeugopod muscle
Namespace:FANTOM
Definition:"A muscle organ that is part of a hindlimb zeugopod (lower leg) [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:22471

MA:0000678
Synonyms: "lower leg muscle" EXACT [MA:0000678]
"muscle of leg" RELATED INCONSISTENT [FMA:22471]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001383(muscle of leg)
part_of:UBERON:0003823(hindlimb zeugopod),UBERON:0006067(musculature of hindlimb zeugopod)



Children

is a:UBERON:0001389 (soleus muscle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004256 (hindlimb zeugopod muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_82ec071e5c7581ca1234ede9e786fa18p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_82ec071e5c7581ca1234ede9e786fa18p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_82ec071e5c7581ca1234ede9e786fa18p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_82ec071e5c7581ca1234ede9e786fa18p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_82ec071e5c7581ca1234ede9e786fa18p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_82ec071e5c7581ca1234ede9e786fa18p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_82ec071e5c7581ca1234ede9e786fa18p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_82ec071e5c7581ca1234ede9e786fa18p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_82ec071e5c7581ca1234ede9e786fa18p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_82ec071e5c7581ca1234ede9e786fa18p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_82ec071e5c7581ca1234ede9e786fa18p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_82ec071e5c7581ca1234ede9e786fa18p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_82ec071e5c7581ca1234ede9e786fa18p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_82ec071e5c7581ca1234ede9e786fa18p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_82ec071e5c7581ca1234ede9e786fa18p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_82ec071e5c7581ca1234ede9e786fa18p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_82ec071e5c7581ca1234ede9e786fa18p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_82ec071e5c7581ca1234ede9e786fa18p@chr10:79759687..79759690, +
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_8a0fdf2e8fb958b2ccba87c30e483527p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_8a0fdf2e8fb958b2ccba87c30e483527p77@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_8a0fdf2e8fb958b2ccba87c30e483527p46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_8a0fdf2e8fb958b2ccba87c30e483527p77@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_8a0fdf2e8fb958b2ccba87c30e483527p46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_8a0fdf2e8fb958b2ccba87c30e483527p54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_8a0fdf2e8fb958b2ccba87c30e483527p104@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_8a0fdf2e8fb958b2ccba87c30e483527p54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_8a0fdf2e8fb958b2ccba87c30e483527p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_8a0fdf2e8fb958b2ccba87c30e483527p108@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_8a0fdf2e8fb958b2ccba87c30e483527p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_8a0fdf2e8fb958b2ccba87c30e483527p7@FLJ36848
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_8a0fdf2e8fb958b2ccba87c30e483527p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_8a0fdf2e8fb958b2ccba87c30e483527p108@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_8a0fdf2e8fb958b2ccba87c30e483527p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_8a0fdf2e8fb958b2ccba87c30e483527p93@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_8a0fdf2e8fb958b2ccba87c30e483527p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_8a0fdf2e8fb958b2ccba87c30e483527p@chr13:51335579..51335582, +
2.55e-98FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr5:95180155..95180172, +
2.55e-98FFCP PHASE2:Hg19::chr21:47769234..47769239,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr21:47769234..47769239, +
2.55e-98FFCP PHASE2:Hg19::chr2:152590465..152590472,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr2:152590465..152590472, -
2.55e-98FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr2:152590465..152590472,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr2:152590465..152590472, -
2.55e-98FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr2:179656442..179656451, -
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr3:69168368..69168389, -
2.55e-98FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_57bdd4b18e557b55995e3cc47d40a1adp38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr3:35732964..35732965,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr2:29398214..29398229,+#_57bdd4b18e557b55995e3cc47d40a1adp27@CLIP4
2.55e-98FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_57bdd4b18e557b55995e3cc47d40a1adp27@CLIP4
2.55e-98FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr3:46924232..46924241, +
2.55e-98FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_57bdd4b18e557b55995e3cc47d40a1adp@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr18:8608021..8608050, +
2.55e-98FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr6:125535391..125535409, +
2.55e-98FFCP PHASE1:Hg19::chr3:46924232..46924241,+#_57bdd4b18e557b55995e3cc47d40a1adp@chr3:46924232..46924241, +
2.55e-98FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_57bdd4b18e557b55995e3cc47d40a1adp38@CLIP1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004256&oldid=3277645"