Personal tools

CL:0002077: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002077
|alt_id=
|name=ecto-epithelial cell
|namespace=cell
|def="An epithelial cell derived from ectoderm." [FMA:69074, http://63.198.234.228/OpenFMA/Ecto-epithelial%20cell.html]
|xref=FMA:69074
|is_a=CL:0000066;;CL:0002371
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-06-29T03:38:22Z
|def="An epithelial cell derived from ectoderm." [FMA:69074, http://63.198.234.228/OpenFMA/Ecto-epithelial%20cell.html]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=CL:0000221
|develops_from=CL:0000221
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002077
|is_a=CL:0000066 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|name=ecto-epithelial cell
|namespace=FANTOM
|obo_creation_date=2010-06-29T03:38:22Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:69074
}}
}}

Latest revision as of 16:40, 12 September 2014

Name:ecto-epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell derived from ectoderm." [FMA:69074, http://63.198.234.228/OpenFMA/Ecto-epithelial%20cell.html]
Xrefs:
links:
FMA:69074
Created by:tmeehan
Creation date:2010-06-29T03:38:22Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell)
develops_from:CL:0000221(ectodermal cell)



Children


is a:CL:0000710 (neurecto-epithelial cell),CL:0002159 (general ecto-epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002077 (ecto-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr14:102291443..102291451,-#_308d5426e73d2624bb76c81c17e3a694p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE2:Mm9::chr7:59135658..59135665,+#_308d5426e73d2624bb76c81c17e3a694p22@Gas2
3.07e-86FFCP PHASE1:Mm9::chr5:92800735..92800736,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE2:Mm9::chr19:55270369..55270394,+#_308d5426e73d2624bb76c81c17e3a694p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE1:Mm9::chr10:67372807..67372809,+#_308d5426e73d2624bb76c81c17e3a694p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418515..94418518,-#_308d5426e73d2624bb76c81c17e3a694p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE2:Mm9::chr15:94418486..94418491,-#_308d5426e73d2624bb76c81c17e3a694p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr5:113939859..113939865,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE2:Mm9::chr4:151450310..151450318,+#_308d5426e73d2624bb76c81c17e3a694p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr6:30619458..30619461,-#_308d5426e73d2624bb76c81c17e3a694p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr9:42139059..42139081,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE1:Mm9::chr9:77109269..77109270,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE1:Mm9::chr9:42139059..42139081,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE2:Mm9::chr10:67372807..67372809,+#_308d5426e73d2624bb76c81c17e3a694p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE1:Mm9::chr2:163517841..163517844,-#_308d5426e73d2624bb76c81c17e3a694p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr11:119881548..119881551,-#_308d5426e73d2624bb76c81c17e3a694p19@Aatk
3.07e-86FFCP PHASE1:Mm9::chr5:113939859..113939865,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr17:34752992..34753001,-#_308d5426e73d2624bb76c81c17e3a694p5@Egfl8
3.07e-86FFCP PHASE2:Mm9::chr15:55289275..55289297,+#_308d5426e73d2624bb76c81c17e3a694p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr15:94418515..94418518,-#_308d5426e73d2624bb76c81c17e3a694p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE1:Mm9::chr14:48406009..48406013,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE1:Mm9::chr7:128226917..128226918,+#_308d5426e73d2624bb76c81c17e3a694p2@Otoa
3.07e-86FFCP PHASE2:Mm9::chr9:77109269..77109270,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE2:Mm9::chr2:163517841..163517844,-#_308d5426e73d2624bb76c81c17e3a694p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr5:113939919..113939925,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE1:Mm9::chr15:55289275..55289297,+#_308d5426e73d2624bb76c81c17e3a694p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr10:24310748..24310749,+#_308d5426e73d2624bb76c81c17e3a694p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE2:Mm9::chr4:151450365..151450374,+#_308d5426e73d2624bb76c81c17e3a694p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr19:23001562..23001563,+#_308d5426e73d2624bb76c81c17e3a694p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE1:Mm9::chr6:30620092..30620097,+#_308d5426e73d2624bb76c81c17e3a694p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE2:Mm9::chr9:42147036..42147053,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE1:Mm9::chr9:77109306..77109314,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr14:102291443..102291451,-#_308d5426e73d2624bb76c81c17e3a694p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE1:Mm9::chr9:42147036..42147053,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE2:Mm9::chr14:102298599..102298602,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE1:Mm9::chr5:113939919..113939925,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE2:Mm9::chr14:102291551..102291553,-#_308d5426e73d2624bb76c81c17e3a694p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr14:62578740..62578749,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr14:119912363..119912365,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr14:48406009..48406013,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE1:Mm9::chr11:119881548..119881551,-#_308d5426e73d2624bb76c81c17e3a694p19@Aatk
3.07e-86FFCP PHASE1:Mm9::chr19:55269566..55269577,-#_308d5426e73d2624bb76c81c17e3a694p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE2:Mm9::chr6:30619458..30619461,-#_308d5426e73d2624bb76c81c17e3a694p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr9:77109306..77109314,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr10:24310748..24310749,+#_308d5426e73d2624bb76c81c17e3a694p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr6:30619311..30619322,-#_308d5426e73d2624bb76c81c17e3a694p16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr4:151450310..151450318,+#_308d5426e73d2624bb76c81c17e3a694p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE2:Mm9::chr5:92800684..92800687,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE2:Mm9::chr9:42207838..42207847,-#_308d5426e73d2624bb76c81c17e3a694p14@Tecta
3.07e-86FFCP PHASE1:Mm9::chr14:102298599..102298602,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr9:42202683..42202684,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr9:42207838..42207847,-#_308d5426e73d2624bb76c81c17e3a694p14@Tecta
3.07e-86FFCP PHASE2:Mm9::chr10:97112452..97112459,+#_308d5426e73d2624bb76c81c17e3a694p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE1:Mm9::chr9:42202683..42202684,-#_308d5426e73d2624bb76c81c17e3a694p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr10:97112452..97112459,+#_308d5426e73d2624bb76c81c17e3a694p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE1:Mm9::chr14:119912363..119912365,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr19:23001562..23001563,+#_308d5426e73d2624bb76c81c17e3a694p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE1:Mm9::chr19:55270369..55270394,+#_308d5426e73d2624bb76c81c17e3a694p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr6:30620092..30620097,+#_308d5426e73d2624bb76c81c17e3a694p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE2:Mm9::chr10:107349495..107349500,-#_308d5426e73d2624bb76c81c17e3a694p6@Otogl
3.07e-86FFCP PHASE1:Mm9::chr4:151450365..151450374,+#_308d5426e73d2624bb76c81c17e3a694p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE2:Mm9::chr5:92800735..92800736,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE1:Mm9::chr10:107349495..107349500,-#_308d5426e73d2624bb76c81c17e3a694p6@Otogl
3.07e-86FFCP PHASE2:Mm9::chr17:34752992..34753001,-#_308d5426e73d2624bb76c81c17e3a694p5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr5:92800684..92800687,+#_308d5426e73d2624bb76c81c17e3a694p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE2:Mm9::chr19:55269566..55269577,-#_308d5426e73d2624bb76c81c17e3a694p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE1:Mm9::chr14:62578740..62578749,+#_308d5426e73d2624bb76c81c17e3a694p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418486..94418491,-#_308d5426e73d2624bb76c81c17e3a694p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE1:Mm9::chr14:102291551..102291553,-#_308d5426e73d2624bb76c81c17e3a694p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr6:30619311..30619322,-#_308d5426e73d2624bb76c81c17e3a694p16@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr7:128226917..128226918,+#_308d5426e73d2624bb76c81c17e3a694p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr7:59135658..59135665,+#_308d5426e73d2624bb76c81c17e3a694p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr10:97109619..97109632,+#_308d5426e73d2624bb76c81c17e3a694p5@Epyc
3.07e-86FFCP PHASE1:Mm9::chr10:97109619..97109632,+#_308d5426e73d2624bb76c81c17e3a694p5@Epyc
2.74e-44FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_8345125252bb0170573bde339ba50348p1@Tecta
2.74e-44FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_8345125252bb0170573bde339ba50348p2@9230102O04Rik
2.74e-44FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_8345125252bb0170573bde339ba50348p7@Glt25d2
2.74e-44FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_8345125252bb0170573bde339ba50348p@chr9:42206745..42206774, -
2.74e-44FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_8345125252bb0170573bde339ba50348p1@Tecta
2.74e-44FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_8345125252bb0170573bde339ba50348p@chr7:29733825..29733837, -
2.74e-44FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_8345125252bb0170573bde339ba50348p@chr3:31585340..31585360, +
2.74e-44FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_8345125252bb0170573bde339ba50348p@chr3:81012915..81012923, +
2.74e-44FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_8345125252bb0170573bde339ba50348p2@Otogl
2.74e-44FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_8345125252bb0170573bde339ba50348p@chr9:42206745..42206774, -
2.74e-44FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_8345125252bb0170573bde339ba50348p1@Otog
2.74e-44FFCP PHASE2:Mm9::chrX:82018139..82018149,+#_8345125252bb0170573bde339ba50348p28@Dmd
2.74e-44FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_8345125252bb0170573bde339ba50348p2@Tectb
2.74e-44FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_8345125252bb0170573bde339ba50348p11@Tsga14
2.74e-44FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_8345125252bb0170573bde339ba50348p2@Otogl
2.74e-44FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_8345125252bb0170573bde339ba50348p6@Jag1
2.74e-44FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_8345125252bb0170573bde339ba50348p10@Tecta
2.74e-44FFCP PHASE2:Mm9::chr14:102297657..102297663,+#_8345125252bb0170573bde339ba50348p@chr14:102297657..102297663, +
2.74e-44FFCP PHASE2:Mm9::chr9:109965316..109965323,+#_8345125252bb0170573bde339ba50348p19@Mtap4
2.74e-44FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_8345125252bb0170573bde339ba50348p@chr3:35012397..35012405, +
2.74e-44FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_8345125252bb0170573bde339ba50348p2@Otol1
2.74e-44FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_8345125252bb0170573bde339ba50348p7@Glt25d2
2.74e-44FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_8345125252bb0170573bde339ba50348p@chr15:58022966..58022995, -
2.74e-44FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_8345125252bb0170573bde339ba50348p7@Tecta
2.74e-44FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_8345125252bb0170573bde339ba50348p10@Tecta
2.74e-44FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_8345125252bb0170573bde339ba50348p1@Tectb

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002077&oldid=3275408"